Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC1.29□□□□□ -2.2
LIM2P55344 AC074133.1-201ENST00000515696 183 ntBASIC1.29□□□□□ -2.2
LIM2P55344 RNU1-142P-201ENST00000516682 145 ntBASIC1.29□□□□□ -2.2
LIM2P55344 RNU7-30P-201ENST00000516835 62 ntBASIC1.29□□□□□ -2.2
LIM2P55344 MIR2355-201ENST00000517199 87 ntBASIC1.29□□□□□ -2.2
LIM2P55344 DNAJC19P9-201ENST00000555084 351 ntBASIC1.29□□□□□ -2.2
LIM2P55344 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC1.29□□□□□ -2.2
LIM2P55344 MIR5695-201ENST00000579717 85 ntBASIC1.29□□□□□ -2.2
LIM2P55344 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC1.29□□□□□ -2.2
LIM2P55344 PISRT1.1-201ENST00000616930 107 ntBASIC1.29□□□□□ -2.2
LIM2P55344 AC245060.5-201ENST00000610778 3293 ntBASIC1.28□□□□□ -2.2
LIM2P55344 MIR302D-201ENST00000362275 68 ntBASIC1.28□□□□□ -2.2
LIM2P55344 Y_RNA.2-201ENST00000362330 96 ntBASIC1.28□□□□□ -2.2
LIM2P55344 Y_RNA.160-201ENST00000363677 92 ntBASIC1.28□□□□□ -2.2
LIM2P55344 Y_RNA.184-201ENST00000363884 108 ntBASIC1.28□□□□□ -2.2
LIM2P55344 SNORD87-201ENST00000364849 89 ntBASIC1.28□□□□□ -2.2
LIM2P55344 RNU6-1264P-201ENST00000383891 107 ntBASIC1.28□□□□□ -2.2
LIM2P55344 RNU6-417P-201ENST00000384712 107 ntBASIC1.28□□□□□ -2.2
LIM2P55344 BTF3P4-201ENST00000418852 495 ntBASIC1.28□□□□□ -2.2
LIM2P55344 MTND4P18-201ENST00000447010 465 ntBASIC1.28□□□□□ -2.2
LIM2P55344 AC005908.1-201ENST00000468701 347 ntBASIC1.28□□□□□ -2.2
LIM2P55344 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.28□□□□□ -2.2
LIM2P55344 RNA5SP458-201ENST00000516188 119 ntBASIC1.28□□□□□ -2.2
LIM2P55344 APOOP3-201ENST00000536787 586 ntBASIC1.28□□□□□ -2.2
LIM2P55344 AC093023.1-201ENST00000547375 507 ntBASIC1.28□□□□□ -2.2
LIM2P55344 AC004584.2-201ENST00000570407 410 ntBASIC1.28□□□□□ -2.2
LIM2P55344 MIR4421-201ENST00000578133 69 ntBASIC1.28□□□□□ -2.2
LIM2P55344 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC1.28□□□□□ -2.2
LIM2P55344 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.28□□□□□ -2.2
LIM2P55344 AC009229.3-201ENST00000608056 282 ntBASIC1.28□□□□□ -2.2
LIM2P55344 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.28□□□□□ -2.2
LIM2P55344 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
LIM2P55344 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.28□□□□□ -2.2
LIM2P55344 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.21
LIM2P55344 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
LIM2P55344 MTND5P16-201ENST00000460269 1703 ntBASIC1.27□□□□□ -2.21
LIM2P55344 MIR410-201ENST00000362222 80 ntBASIC1.27□□□□□ -2.21
LIM2P55344 Y_RNA.67-201ENST00000362870 100 ntBASIC1.27□□□□□ -2.21
LIM2P55344 RNU6-203P-201ENST00000384038 104 ntBASIC1.27□□□□□ -2.21
LIM2P55344 MT-TL1-201ENST00000386347 75 ntBASIC1.27□□□□□ -2.21
LIM2P55344 RNA5SP323-201ENST00000391094 133 ntBASIC1.27□□□□□ -2.21
LIM2P55344 Y_RNA.595-201ENST00000410403 105 ntBASIC1.27□□□□□ -2.21
LIM2P55344 AP1B1P2-201ENST00000416196 106 ntBASIC1.27□□□□□ -2.21
LIM2P55344 COX6CP10-201ENST00000416832 224 ntBASIC1.27□□□□□ -2.21
LIM2P55344 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.27□□□□□ -2.21
LIM2P55344 SUMO1P2-201ENST00000452524 304 ntBASIC1.27□□□□□ -2.21
LIM2P55344 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.27□□□□□ -2.21
LIM2P55344 Y_RNA.635-201ENST00000459041 101 ntBASIC1.27□□□□□ -2.21
LIM2P55344 RNU7-94P-201ENST00000459576 63 ntBASIC1.27□□□□□ -2.21
LIM2P55344 RNA5SP445-201ENST00000515889 115 ntBASIC1.27□□□□□ -2.21
LIM2P55344 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC1.27□□□□□ -2.21
LIM2P55344 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.27□□□□□ -2.21
LIM2P55344 AC068338.1-201ENST00000565567 176 ntBASIC1.27□□□□□ -2.21
LIM2P55344 MZT1P2-201ENST00000604387 248 ntBASIC1.27□□□□□ -2.21
LIM2P55344 AC025253.1-201ENST00000613623 543 ntBASIC1.27□□□□□ -2.21
LIM2P55344 U6.73-201ENST00000619194 103 ntBASIC1.27□□□□□ -2.21
LIM2P55344 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.27□□□□□ -2.21
LIM2P55344 RNU6-727P-201ENST00000363592 107 ntBASIC1.26□□□□□ -2.21
LIM2P55344 MIR194-1-201ENST00000384892 85 ntBASIC1.26□□□□□ -2.21
LIM2P55344 MIR329-1-201ENST00000385028 80 ntBASIC1.26□□□□□ -2.21
LIM2P55344 MTND3P10-201ENST00000450967 341 ntBASIC1.26□□□□□ -2.21
LIM2P55344 RPS29P29-201ENST00000456396 171 ntBASIC1.26□□□□□ -2.21
LIM2P55344 RNU1-123P-201ENST00000458950 160 ntBASIC1.26□□□□□ -2.21
LIM2P55344 RPL17P19-201ENST00000489069 552 ntBASIC1.26□□□□□ -2.21
LIM2P55344 HMGN1P12-201ENST00000499125 195 ntBASIC1.26□□□□□ -2.21
LIM2P55344 AC010598.1-201ENST00000510378 103 ntBASIC1.26□□□□□ -2.21
LIM2P55344 RNU7-99P-201ENST00000516271 62 ntBASIC1.26□□□□□ -2.21
LIM2P55344 AP003033.1-201ENST00000527244 415 ntBASIC1.26□□□□□ -2.21
LIM2P55344 MIR4709-201ENST00000577272 72 ntBASIC1.26□□□□□ -2.21
LIM2P55344 AC125232.2-201ENST00000592457 143 ntBASIC1.26□□□□□ -2.21
LIM2P55344 U6.108-201ENST00000637764 58 ntBASIC1.26□□□□□ -2.21
LIM2P55344 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.26□□□□□ -2.21
LIM2P55344 MIR378A-201ENST00000362177 66 ntBASIC1.25□□□□□ -2.21
LIM2P55344 Y_RNA.48-201ENST00000362710 103 ntBASIC1.25□□□□□ -2.21
LIM2P55344 SNORA33-201ENST00000363664 130 ntBASIC1.25□□□□□ -2.21
LIM2P55344 RNU6-1145P-201ENST00000384246 107 ntBASIC1.25□□□□□ -2.21
LIM2P55344 SNORA75.4-201ENST00000391278 119 ntBASIC1.25□□□□□ -2.21
LIM2P55344 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.25□□□□□ -2.21
LIM2P55344 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.25□□□□□ -2.21
LIM2P55344 AC073910.1-201ENST00000445047 438 ntBASIC1.25□□□□□ -2.21
LIM2P55344 AC009474.2-201ENST00000451383 136 ntBASIC1.25□□□□□ -2.21
LIM2P55344 AL163195.1-201ENST00000496941 348 ntBASIC1.25□□□□□ -2.21
LIM2P55344 PRDX4P1-201ENST00000507189 574 ntBASIC1.25□□□□□ -2.21
LIM2P55344 RNU6-970P-201ENST00000516312 107 ntBASIC1.25□□□□□ -2.21
LIM2P55344 RN7SKP49-201ENST00000516675 260 ntBASIC1.25□□□□□ -2.21
LIM2P55344 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.25□□□□□ -2.21
LIM2P55344 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.25□□□□□ -2.21
LIM2P55344 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.25□□□□□ -2.21
LIM2P55344 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC1.25□□□□□ -2.21
LIM2P55344 AC015688.6-201ENST00000577737 104 ntBASIC1.25□□□□□ -2.21
LIM2P55344 AC080078.3-201ENST00000605407 463 ntBASIC1.25□□□□□ -2.21
LIM2P55344 AC104260.1-201ENST00000616660 539 ntBASIC1.25□□□□□ -2.21
LIM2P55344 AC092794.2-201ENST00000620933 563 ntBASIC1.25□□□□□ -2.21
LIM2P55344 ICE2P2-201ENST00000483823 2787 ntBASIC1.25□□□□□ -2.21
LIM2P55344 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.24□□□□□ -2.21
LIM2P55344 AC100821.1-201ENST00000523153 2479 ntBASIC1.24□□□□□ -2.21
LIM2P55344 RNU6-1123P-201ENST00000362347 106 ntBASIC1.24□□□□□ -2.21
LIM2P55344 RNU6-222P-201ENST00000362438 107 ntBASIC1.24□□□□□ -2.21
LIM2P55344 SNORA7.1-201ENST00000363750 139 ntBASIC1.24□□□□□ -2.21
LIM2P55344 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.24□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms