Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.75□□□□□ -2.13
CDH13P55290 RNU6-107P-201ENST00000516643 102 ntBASIC1.75□□□□□ -2.13
CDH13P55290 RNA5SP481-201ENST00000516814 122 ntBASIC1.75□□□□□ -2.13
CDH13P55290 AC018448.1-201ENST00000552843 316 ntBASIC1.75□□□□□ -2.13
CDH13P55290 MIR3122-201ENST00000577243 73 ntBASIC1.75□□□□□ -2.13
CDH13P55290 AL357075.2-201ENST00000614906 189 ntBASIC1.75□□□□□ -2.13
CDH13P55290 RNU4-73P-201ENST00000363164 141 ntBASIC1.74□□□□□ -2.13
CDH13P55290 SNORD48-201ENST00000364953 64 ntBASIC1.74□□□□□ -2.13
CDH13P55290 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
CDH13P55290 HMGB3P17-201ENST00000504195 649 ntBASIC1.74□□□□□ -2.13
CDH13P55290 AC105758.1-201ENST00000506038 399 ntBASIC1.74□□□□□ -2.13
CDH13P55290 SNORA40.9-201ENST00000515895 93 ntBASIC1.74□□□□□ -2.13
CDH13P55290 SNORA44.1-201ENST00000517031 108 ntBASIC1.74□□□□□ -2.13
CDH13P55290 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.74□□□□□ -2.13
CDH13P55290 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC1.74□□□□□ -2.13
CDH13P55290 AL442163.3-201ENST00000554110 156 ntBASIC1.74□□□□□ -2.13
CDH13P55290 AL137100.2-201ENST00000555786 315 ntBASIC1.74□□□□□ -2.13
CDH13P55290 AC110588.1-201ENST00000559699 137 ntBASIC1.74□□□□□ -2.13
CDH13P55290 AC024614.2-201ENST00000577584 372 ntBASIC1.74□□□□□ -2.13
CDH13P55290 Y_RNA.804-201ENST00000615262 101 ntBASIC1.74□□□□□ -2.13
CDH13P55290 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.74□□□□□ -2.13
CDH13P55290 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.74□□□□□ -2.13
CDH13P55290 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
CDH13P55290 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.73□□□□□ -2.13
CDH13P55290 RNY3P4-201ENST00000384428 101 ntBASIC1.73□□□□□ -2.13
CDH13P55290 Y_RNA.498-201ENST00000384460 102 ntBASIC1.73□□□□□ -2.13
CDH13P55290 MIR9-3-201ENST00000385084 90 ntBASIC1.73□□□□□ -2.13
CDH13P55290 RNU6-360P-201ENST00000390944 104 ntBASIC1.73□□□□□ -2.13
CDH13P55290 SNORD12B-201ENST00000410433 91 ntBASIC1.73□□□□□ -2.13
CDH13P55290 AF228730.4-201ENST00000421457 183 ntBASIC1.73□□□□□ -2.13
CDH13P55290 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.73□□□□□ -2.13
CDH13P55290 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.73□□□□□ -2.13
CDH13P55290 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC1.73□□□□□ -2.13
CDH13P55290 RPL23AP63-201ENST00000498752 471 ntBASIC1.73□□□□□ -2.13
CDH13P55290 AC010598.1-201ENST00000510378 103 ntBASIC1.73□□□□□ -2.13
CDH13P55290 AC107393.1-201ENST00000512403 346 ntBASIC1.73□□□□□ -2.13
CDH13P55290 RNU6-699P-201ENST00000517081 110 ntBASIC1.73□□□□□ -2.13
CDH13P55290 AC093027.1-201ENST00000546698 429 ntBASIC1.73□□□□□ -2.13
CDH13P55290 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.73□□□□□ -2.13
CDH13P55290 AL359075.3-201ENST00000613288 217 ntBASIC1.73□□□□□ -2.13
CDH13P55290 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
CDH13P55290 AL356292.1-201ENST00000283110 373 ntBASIC1.72□□□□□ -2.13
CDH13P55290 Y_RNA.314-201ENST00000365114 102 ntBASIC1.72□□□□□ -2.13
CDH13P55290 Y_RNA.428-201ENST00000384078 102 ntBASIC1.72□□□□□ -2.13
CDH13P55290 Y_RNA.463-201ENST00000384271 102 ntBASIC1.72□□□□□ -2.13
CDH13P55290 AC019129.1-201ENST00000403786 261 ntBASIC1.72□□□□□ -2.13
CDH13P55290 Y_RNA.605-201ENST00000410577 105 ntBASIC1.72□□□□□ -2.13
CDH13P55290 RNU2-7P-201ENST00000410794 178 ntBASIC1.72□□□□□ -2.13
CDH13P55290 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.72□□□□□ -2.13
CDH13P55290 RPL31P63-201ENST00000422565 375 ntBASIC1.72□□□□□ -2.13
CDH13P55290 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC1.72□□□□□ -2.13
CDH13P55290 MRPS18CP6-201ENST00000423587 223 ntBASIC1.72□□□□□ -2.13
CDH13P55290 FTH1P12-201ENST00000432137 551 ntBASIC1.72□□□□□ -2.13
CDH13P55290 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.72□□□□□ -2.13
CDH13P55290 SNORD65B-201ENST00000459126 73 ntBASIC1.72□□□□□ -2.13
CDH13P55290 RNU1-142P-201ENST00000516682 145 ntBASIC1.72□□□□□ -2.13
CDH13P55290 MIR3198-2-201ENST00000577868 80 ntBASIC1.72□□□□□ -2.13
CDH13P55290 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.72□□□□□ -2.13
CDH13P55290 AC138305.3-201ENST00000624988 240 ntBASIC1.72□□□□□ -2.13
CDH13P55290 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.72□□□□□ -2.13
CDH13P55290 ZNF355P-201ENST00000427301 3216 ntBASIC1.71□□□□□ -2.14
CDH13P55290 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
CDH13P55290 RNU4-79P-201ENST00000362764 141 ntBASIC1.71□□□□□ -2.14
CDH13P55290 RNU4-42P-201ENST00000364738 142 ntBASIC1.71□□□□□ -2.14
CDH13P55290 Y_RNA.315-201ENST00000365117 102 ntBASIC1.71□□□□□ -2.14
CDH13P55290 RNU6-1310P-201ENST00000384153 107 ntBASIC1.71□□□□□ -2.14
CDH13P55290 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
CDH13P55290 RNA5SP467-201ENST00000391274 118 ntBASIC1.71□□□□□ -2.14
CDH13P55290 AC022028.1-201ENST00000412054 408 ntBASIC1.71□□□□□ -2.14
CDH13P55290 RNU6-625P-201ENST00000459412 107 ntBASIC1.71□□□□□ -2.14
CDH13P55290 RPL36AP21-201ENST00000490372 323 ntBASIC1.71□□□□□ -2.14
CDH13P55290 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.71□□□□□ -2.14
CDH13P55290 AC025465.3-201ENST00000510570 311 ntBASIC1.71□□□□□ -2.14
CDH13P55290 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC1.71□□□□□ -2.14
CDH13P55290 RNA5SP437-201ENST00000517249 129 ntBASIC1.71□□□□□ -2.14
CDH13P55290 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC1.71□□□□□ -2.14
CDH13P55290 RAB11AP2-201ENST00000545905 639 ntBASIC1.71□□□□□ -2.14
CDH13P55290 MIR3618-201ENST00000580330 88 ntBASIC1.71□□□□□ -2.14
CDH13P55290 MIR4795-201ENST00000584182 89 ntBASIC1.71□□□□□ -2.14
CDH13P55290 AL117336.2-201ENST00000602435 335 ntBASIC1.71□□□□□ -2.14
CDH13P55290 U2.1-201ENST00000618978 145 ntBASIC1.71□□□□□ -2.14
CDH13P55290 U6.73-201ENST00000619194 103 ntBASIC1.71□□□□□ -2.14
CDH13P55290 AC091925.1-201ENST00000623204 462 ntBASIC1.71□□□□□ -2.14
CDH13P55290 MIR3674-201ENST00000636576 68 ntBASIC1.71□□□□□ -2.14
CDH13P55290 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
CDH13P55290 RNU6-1115P-201ENST00000362490 106 ntBASIC1.7□□□□□ -2.14
CDH13P55290 SNORD114-1-201ENST00000362705 72 ntBASIC1.7□□□□□ -2.14
CDH13P55290 MIR30A-201ENST00000385092 71 ntBASIC1.7□□□□□ -2.14
CDH13P55290 RNA5SP323-201ENST00000391094 133 ntBASIC1.7□□□□□ -2.14
CDH13P55290 RAB28P5-201ENST00000427490 651 ntBASIC1.7□□□□□ -2.14
CDH13P55290 HSPE1P9-201ENST00000440046 311 ntBASIC1.7□□□□□ -2.14
CDH13P55290 SUMO1P2-201ENST00000452524 304 ntBASIC1.7□□□□□ -2.14
CDH13P55290 RPS26P45-201ENST00000471748 340 ntBASIC1.7□□□□□ -2.14
CDH13P55290 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.7□□□□□ -2.14
CDH13P55290 HMGN1P13-201ENST00000505795 138 ntBASIC1.7□□□□□ -2.14
CDH13P55290 RNU6-976P-201ENST00000516086 111 ntBASIC1.7□□□□□ -2.14
CDH13P55290 SNORD116.3-201ENST00000517176 78 ntBASIC1.7□□□□□ -2.14
CDH13P55290 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC1.7□□□□□ -2.14
CDH13P55290 U6.108-201ENST00000637764 58 ntBASIC1.7□□□□□ -2.14
CDH13P55290 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.7□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms