Protein–RNA interactions for Protein: P54278

PMS2, Mismatch repair endonuclease PMS2, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2P54278 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.31□□□□□ -2.04
PMS2P54278 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.31□□□□□ -2.04
PMS2P54278 Y_RNA.84-201ENST00000363011 104 ntBASIC2.31□□□□□ -2.04
PMS2P54278 snoU2_19.2-201ENST00000363024 80 ntBASIC2.31□□□□□ -2.04
PMS2P54278 RNU6-961P-201ENST00000363893 105 ntBASIC2.31□□□□□ -2.04
PMS2P54278 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC2.31□□□□□ -2.04
PMS2P54278 RNU6-926P-201ENST00000384075 107 ntBASIC2.31□□□□□ -2.04
PMS2P54278 Y_RNA.581-201ENST00000391017 97 ntBASIC2.31□□□□□ -2.04
PMS2P54278 U3.40-201ENST00000408706 208 ntBASIC2.31□□□□□ -2.04
PMS2P54278 RNU5A-5P-201ENST00000411054 116 ntBASIC2.31□□□□□ -2.04
PMS2P54278 RPL21P38-201ENST00000418090 167 ntBASIC2.31□□□□□ -2.04
PMS2P54278 AC139712.2-201ENST00000424302 339 ntBASIC2.31□□□□□ -2.04
PMS2P54278 AC027124.2-201ENST00000428249 105 ntBASIC2.31□□□□□ -2.04
PMS2P54278 AC005002.2-201ENST00000438228 269 ntBASIC2.31□□□□□ -2.04
PMS2P54278 SNORD127-201ENST00000458892 86 ntBASIC2.31□□□□□ -2.04
PMS2P54278 SNORA4.4-201ENST00000515921 135 ntBASIC2.31□□□□□ -2.04
PMS2P54278 MIR514B-201ENST00000516774 80 ntBASIC2.31□□□□□ -2.04
PMS2P54278 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.31□□□□□ -2.04
PMS2P54278 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.31□□□□□ -2.04
PMS2P54278 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.31□□□□□ -2.04
PMS2P54278 MIR4648-201ENST00000580107 72 ntBASIC2.31□□□□□ -2.04
PMS2P54278 MIR5007-201ENST00000583098 95 ntBASIC2.31□□□□□ -2.04
PMS2P54278 MIR4769-201ENST00000584126 77 ntBASIC2.31□□□□□ -2.04
PMS2P54278 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC2.31□□□□□ -2.04
PMS2P54278 AC012640.5-201ENST00000623897 319 ntBASIC2.31□□□□□ -2.04
PMS2P54278 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
PMS2P54278 SNORD81.1-201ENST00000363064 77 ntBASIC2.3□□□□□ -2.04
PMS2P54278 RNU6-626P-201ENST00000363354 107 ntBASIC2.3□□□□□ -2.04
PMS2P54278 RNA5SP37-201ENST00000365420 130 ntBASIC2.3□□□□□ -2.04
PMS2P54278 SNORA18.2-201ENST00000383865 132 ntBASIC2.3□□□□□ -2.04
PMS2P54278 Y_RNA.461-201ENST00000384263 103 ntBASIC2.3□□□□□ -2.04
PMS2P54278 RNU6-505P-201ENST00000384427 107 ntBASIC2.3□□□□□ -2.04
PMS2P54278 SNORA12-201ENST00000391162 147 ntBASIC2.3□□□□□ -2.04
PMS2P54278 RNU6-1203P-201ENST00000410703 110 ntBASIC2.3□□□□□ -2.04
PMS2P54278 RNA5SP270-201ENST00000411361 118 ntBASIC2.3□□□□□ -2.04
PMS2P54278 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC2.3□□□□□ -2.04
PMS2P54278 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC2.3□□□□□ -2.04
PMS2P54278 EDDM3CP-201ENST00000415977 425 ntBASIC2.3□□□□□ -2.04
PMS2P54278 AL390729.2-201ENST00000416137 156 ntBASIC2.3□□□□□ -2.04
PMS2P54278 NDUFB4P10-201ENST00000452541 359 ntBASIC2.3□□□□□ -2.04
PMS2P54278 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.3□□□□□ -2.04
PMS2P54278 AC098869.1-201ENST00000481627 292 ntBASIC2.3□□□□□ -2.04
PMS2P54278 HSPE1P18-201ENST00000517602 280 ntBASIC2.3□□□□□ -2.04
PMS2P54278 AC023157.2-201ENST00000540596 141 ntBASIC2.3□□□□□ -2.04
PMS2P54278 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.3□□□□□ -2.04
PMS2P54278 AC046143.2-201ENST00000609789 160 ntBASIC2.3□□□□□ -2.04
PMS2P54278 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.3□□□□□ -2.04
PMS2P54278 AP000553.5-201ENST00000641933 54 ntBASIC2.3□□□□□ -2.04
PMS2P54278 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
PMS2P54278 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
PMS2P54278 Y_RNA.288-201ENST00000364854 92 ntBASIC2.29□□□□□ -2.04
PMS2P54278 RNU6-20P-201ENST00000384106 107 ntBASIC2.29□□□□□ -2.04
PMS2P54278 RNU6-937P-201ENST00000384325 106 ntBASIC2.29□□□□□ -2.04
PMS2P54278 Y_RNA.483-201ENST00000384380 101 ntBASIC2.29□□□□□ -2.04
PMS2P54278 Y_RNA.562-201ENST00000384695 113 ntBASIC2.29□□□□□ -2.04
PMS2P54278 Y_RNA.570-201ENST00000384750 101 ntBASIC2.29□□□□□ -2.04
PMS2P54278 SNORD23.1-201ENST00000408212 104 ntBASIC2.29□□□□□ -2.04
PMS2P54278 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC2.29□□□□□ -2.04
PMS2P54278 AC096920.1-201ENST00000423991 241 ntBASIC2.29□□□□□ -2.04
PMS2P54278 AC018634.1-201ENST00000437554 401 ntBASIC2.29□□□□□ -2.04
PMS2P54278 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.29□□□□□ -2.04
PMS2P54278 TRBVB-201ENST00000477100 408 ntBASIC2.29□□□□□ -2.04
PMS2P54278 RPS27P21-201ENST00000486977 252 ntBASIC2.29□□□□□ -2.04
PMS2P54278 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.29□□□□□ -2.04
PMS2P54278 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.29□□□□□ -2.04
PMS2P54278 RNU6-965P-201ENST00000516721 96 ntBASIC2.29□□□□□ -2.04
PMS2P54278 RNA5SP137-201ENST00000516833 135 ntBASIC2.29□□□□□ -2.04
PMS2P54278 RRN3P3-201ENST00000549207 578 ntBASIC2.29□□□□□ -2.04
PMS2P54278 AC018448.1-201ENST00000552843 316 ntBASIC2.29□□□□□ -2.04
PMS2P54278 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.29□□□□□ -2.04
PMS2P54278 MIR5006-201ENST00000583027 110 ntBASIC2.29□□□□□ -2.04
PMS2P54278 SNORD11B-201ENST00000607707 90 ntBASIC2.29□□□□□ -2.04
PMS2P54278 AC127459.3-201ENST00000624328 466 ntBASIC2.29□□□□□ -2.04
PMS2P54278 AC068205.3-201ENST00000636385 468 ntBASIC2.29□□□□□ -2.04
PMS2P54278 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
PMS2P54278 ANKRD30BP1-201ENST00000451052 2186 ntBASIC2.29□□□□□ -2.04
PMS2P54278 MIR335-201ENST00000362173 94 ntBASIC2.28□□□□□ -2.04
PMS2P54278 RNU6-1310P-201ENST00000384153 107 ntBASIC2.28□□□□□ -2.04
PMS2P54278 MIR215-201ENST00000384858 110 ntBASIC2.28□□□□□ -2.04
PMS2P54278 RNA5SP504-201ENST00000410676 117 ntBASIC2.28□□□□□ -2.04
PMS2P54278 RNU2-48P-201ENST00000410694 191 ntBASIC2.28□□□□□ -2.04
PMS2P54278 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.28□□□□□ -2.04
PMS2P54278 UQCRBP2-201ENST00000447827 297 ntBASIC2.28□□□□□ -2.04
PMS2P54278 RNU6-496P-201ENST00000516145 99 ntBASIC2.28□□□□□ -2.04
PMS2P54278 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC2.28□□□□□ -2.04
PMS2P54278 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.28□□□□□ -2.04
PMS2P54278 MIR1273D-201ENST00000577266 86 ntBASIC2.28□□□□□ -2.04
PMS2P54278 SNORD113-5-201ENST00000607261 78 ntBASIC2.28□□□□□ -2.04
PMS2P54278 AP001282.2-201ENST00000616149 309 ntBASIC2.28□□□□□ -2.04
PMS2P54278 AC008873.1-201ENST00000625051 138 ntBASIC2.28□□□□□ -2.04
PMS2P54278 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.28□□□□□ -2.04
PMS2P54278 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.28□□□□□ -2.04
PMS2P54278 AC010615.1-201ENST00000594254 1764 ntBASIC2.28□□□□□ -2.04
PMS2P54278 SNORD113-8-201ENST00000363497 74 ntBASIC2.27□□□□□ -2.05
PMS2P54278 Y_RNA.188-201ENST00000363952 111 ntBASIC2.27□□□□□ -2.05
PMS2P54278 Y_RNA.498-201ENST00000384460 102 ntBASIC2.27□□□□□ -2.05
PMS2P54278 AC245102.2-201ENST00000448956 180 ntBASIC2.27□□□□□ -2.05
PMS2P54278 AL137159.1-201ENST00000452808 512 ntBASIC2.27□□□□□ -2.05
PMS2P54278 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.27□□□□□ -2.05
PMS2P54278 RNU6-717P-201ENST00000459076 104 ntBASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 168.7 ms