Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.5□□□□□ -2.01
COPB1P53618 AC009963.1-201ENST00000417265 157 ntBASIC2.5□□□□□ -2.01
COPB1P53618 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.5□□□□□ -2.01
COPB1P53618 AC104435.1-201ENST00000483483 166 ntBASIC2.5□□□□□ -2.01
COPB1P53618 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.5□□□□□ -2.01
COPB1P53618 SERF1AP1-201ENST00000514575 187 ntBASIC2.5□□□□□ -2.01
COPB1P53618 Y_RNA.673-201ENST00000516306 88 ntBASIC2.5□□□□□ -2.01
COPB1P53618 MIR5007-201ENST00000583098 95 ntBASIC2.5□□□□□ -2.01
COPB1P53618 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.5□□□□□ -2.01
COPB1P53618 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.5□□□□□ -2.01
COPB1P53618 AC091932.3-201ENST00000624223 323 ntBASIC2.5□□□□□ -2.01
COPB1P53618 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.5□□□□□ -2.01
COPB1P53618 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.5□□□□□ -2.01
COPB1P53618 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.5□□□□□ -2.01
COPB1P53618 MIRLET7G-201ENST00000362280 84 ntBASIC2.49□□□□□ -2.01
COPB1P53618 RNU6-454P-201ENST00000364292 107 ntBASIC2.49□□□□□ -2.01
COPB1P53618 RNU6-326P-201ENST00000365480 107 ntBASIC2.49□□□□□ -2.01
COPB1P53618 RNU6-1310P-201ENST00000384153 107 ntBASIC2.49□□□□□ -2.01
COPB1P53618 RNU6-1026P-201ENST00000384465 108 ntBASIC2.49□□□□□ -2.01
COPB1P53618 Y_RNA.539-201ENST00000384635 107 ntBASIC2.49□□□□□ -2.01
COPB1P53618 RNU6-21P-201ENST00000384710 107 ntBASIC2.49□□□□□ -2.01
COPB1P53618 MIR586-201ENST00000385035 97 ntBASIC2.49□□□□□ -2.01
COPB1P53618 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
COPB1P53618 RNU6-220P-201ENST00000390919 107 ntBASIC2.49□□□□□ -2.01
COPB1P53618 RNU6-847P-201ENST00000411115 108 ntBASIC2.49□□□□□ -2.01
COPB1P53618 RN7SKP192-201ENST00000411291 327 ntBASIC2.49□□□□□ -2.01
COPB1P53618 AL135786.1-201ENST00000415892 214 ntBASIC2.49□□□□□ -2.01
COPB1P53618 NDUFB4P10-201ENST00000452541 359 ntBASIC2.49□□□□□ -2.01
COPB1P53618 RPL23AP3-201ENST00000453844 468 ntBASIC2.49□□□□□ -2.01
COPB1P53618 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.49□□□□□ -2.01
COPB1P53618 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.49□□□□□ -2.01
COPB1P53618 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.49□□□□□ -2.01
COPB1P53618 AC008749.1-201ENST00000597650 306 ntBASIC2.49□□□□□ -2.01
COPB1P53618 AL109918.3-201ENST00000603072 338 ntBASIC2.49□□□□□ -2.01
COPB1P53618 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.49□□□□□ -2.01
COPB1P53618 MIR5739-201ENST00000619803 80 ntBASIC2.49□□□□□ -2.01
COPB1P53618 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.49□□□□□ -2.01
COPB1P53618 CTSLP2-204ENST00000629029 392 ntBASIC2.49□□□□□ -2.01
COPB1P53618 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
COPB1P53618 AP006437.1-201ENST00000641440 3685 ntBASIC2.48□□□□□ -2.01
COPB1P53618 RNA5SP432-201ENST00000362480 116 ntBASIC2.48□□□□□ -2.01
COPB1P53618 U3.8-201ENST00000363675 217 ntBASIC2.48□□□□□ -2.01
COPB1P53618 SNORA67.1-201ENST00000364749 141 ntBASIC2.48□□□□□ -2.01
COPB1P53618 Y_RNA.331-201ENST00000365267 102 ntBASIC2.48□□□□□ -2.01
COPB1P53618 Y_RNA.352-201ENST00000365439 102 ntBASIC2.48□□□□□ -2.01
COPB1P53618 AL603910.2-201ENST00000407268 136 ntBASIC2.48□□□□□ -2.01
COPB1P53618 MIR548H3-201ENST00000408771 118 ntBASIC2.48□□□□□ -2.01
COPB1P53618 RNU2-54P-201ENST00000410299 190 ntBASIC2.48□□□□□ -2.01
COPB1P53618 RPL23AP36-201ENST00000413895 458 ntBASIC2.48□□□□□ -2.01
COPB1P53618 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.48□□□□□ -2.01
COPB1P53618 AL161788.1-201ENST00000441805 169 ntBASIC2.48□□□□□ -2.01
COPB1P53618 ATP5EP1-201ENST00000510257 156 ntBASIC2.48□□□□□ -2.01
COPB1P53618 RNU5F-4P-201ENST00000516581 114 ntBASIC2.48□□□□□ -2.01
COPB1P53618 SCARNA24.2-201ENST00000516968 130 ntBASIC2.48□□□□□ -2.01
COPB1P53618 RNU1-117P-201ENST00000517041 158 ntBASIC2.48□□□□□ -2.01
COPB1P53618 AC090616.3-201ENST00000582184 217 ntBASIC2.48□□□□□ -2.01
COPB1P53618 AC078938.1-201ENST00000620993 318 ntBASIC2.48□□□□□ -2.01
COPB1P53618 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
COPB1P53618 RNU6-545P-201ENST00000362681 104 ntBASIC2.47□□□□□ -2.01
COPB1P53618 Y_RNA.136-201ENST00000363444 102 ntBASIC2.47□□□□□ -2.01
COPB1P53618 Y_RNA.257-201ENST00000364596 102 ntBASIC2.47□□□□□ -2.01
COPB1P53618 SNORA20.1-201ENST00000364790 130 ntBASIC2.47□□□□□ -2.01
COPB1P53618 RNU6-234P-201ENST00000365229 104 ntBASIC2.47□□□□□ -2.01
COPB1P53618 Y_RNA.418-201ENST00000384029 102 ntBASIC2.47□□□□□ -2.01
COPB1P53618 Y_RNA.569-201ENST00000384749 103 ntBASIC2.47□□□□□ -2.01
COPB1P53618 MIR548B-201ENST00000385247 97 ntBASIC2.47□□□□□ -2.01
COPB1P53618 RNA5SP475-201ENST00000410568 110 ntBASIC2.47□□□□□ -2.01
COPB1P53618 RNU2-48P-201ENST00000410694 191 ntBASIC2.47□□□□□ -2.01
COPB1P53618 AC005042.3-201ENST00000453230 174 ntBASIC2.47□□□□□ -2.01
COPB1P53618 HMGN2P9-201ENST00000476875 229 ntBASIC2.47□□□□□ -2.01
COPB1P53618 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.47□□□□□ -2.01
COPB1P53618 RNU2-31P-201ENST00000516954 155 ntBASIC2.47□□□□□ -2.01
COPB1P53618 RNU6-111P-201ENST00000517179 105 ntBASIC2.47□□□□□ -2.01
COPB1P53618 RNU2-12P-201ENST00000517216 168 ntBASIC2.47□□□□□ -2.01
COPB1P53618 AC109329.2-201ENST00000519658 482 ntBASIC2.47□□□□□ -2.01
COPB1P53618 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.47□□□□□ -2.01
COPB1P53618 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC2.47□□□□□ -2.01
COPB1P53618 MIR1248-201ENST00000629190 106 ntBASIC2.47□□□□□ -2.01
COPB1P53618 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.47□□□□□ -2.01
COPB1P53618 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
COPB1P53618 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
COPB1P53618 RNU1-23P-201ENST00000363361 144 ntBASIC2.46□□□□□ -2.02
COPB1P53618 SNORA72.2-201ENST00000365028 127 ntBASIC2.46□□□□□ -2.02
COPB1P53618 Y_RNA.383-201ENST00000383855 97 ntBASIC2.46□□□□□ -2.02
COPB1P53618 MIR504-201ENST00000385065 83 ntBASIC2.46□□□□□ -2.02
COPB1P53618 AC007064.1-201ENST00000412238 351 ntBASIC2.46□□□□□ -2.02
COPB1P53618 AC003685.2-201ENST00000422795 395 ntBASIC2.46□□□□□ -2.02
COPB1P53618 RNU7-14P-201ENST00000459331 62 ntBASIC2.46□□□□□ -2.02
COPB1P53618 RN7SL636P-201ENST00000497504 294 ntBASIC2.46□□□□□ -2.02
COPB1P53618 SNORA48.11-201ENST00000517015 89 ntBASIC2.46□□□□□ -2.02
COPB1P53618 MIR4643-201ENST00000577473 78 ntBASIC2.46□□□□□ -2.02
COPB1P53618 AL356280.1-201ENST00000603614 379 ntBASIC2.46□□□□□ -2.02
COPB1P53618 U2.14-201ENST00000615943 113 ntBASIC2.46□□□□□ -2.02
COPB1P53618 AC141273.2-201ENST00000618989 130 ntBASIC2.46□□□□□ -2.02
COPB1P53618 AC006001.4-201ENST00000622243 395 ntBASIC2.46□□□□□ -2.02
COPB1P53618 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
COPB1P53618 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
COPB1P53618 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.46□□□□□ -2.02
COPB1P53618 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC2.46□□□□□ -2.02
COPB1P53618 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms