Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC-0.06□□□□□ -2.42
NUP98P52948 AC022418.1-201ENST00000624118 445 ntBASIC-0.06□□□□□ -2.42
NUP98P52948 MIRLET7C-201ENST00000362160 84 ntBASIC-0.06□□□□□ -2.42
NUP98P52948 SNORA2B-201ENST00000384583 137 ntBASIC-0.06□□□□□ -2.42
NUP98P52948 MIR520F-201ENST00000384824 87 ntBASIC-0.06□□□□□ -2.42
NUP98P52948 MIR520C-201ENST00000385005 87 ntBASIC-0.06□□□□□ -2.42
NUP98P52948 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC-0.06□□□□□ -2.42
NUP98P52948 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC-0.06□□□□□ -2.42
NUP98P52948 AC079781.2-201ENST00000446424 169 ntBASIC-0.06□□□□□ -2.42
NUP98P52948 AL392103.1-201ENST00000447000 198 ntBASIC-0.06□□□□□ -2.42
NUP98P52948 HSFY5P-201ENST00000453726 309 ntBASIC-0.06□□□□□ -2.42
NUP98P52948 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC-0.06□□□□□ -2.42
NUP98P52948 MTND1P22-201ENST00000510572 951 ntBASIC-0.06□□□□□ -2.42
NUP98P52948 RNU6-1198P-201ENST00000516904 67 ntBASIC-0.06□□□□□ -2.42
NUP98P52948 AC141557.1-201ENST00000540982 400 ntBASIC-0.06□□□□□ -2.42
NUP98P52948 AL139418.1-201ENST00000613613 177 ntBASIC-0.06□□□□□ -2.42
NUP98P52948 AC009159.2-201ENST00000617603 606 ntBASIC-0.06□□□□□ -2.42
NUP98P52948 RNU6-931P-201ENST00000363850 107 ntBASIC-0.07□□□□□ -2.42
NUP98P52948 RNU6-30P-201ENST00000384561 107 ntBASIC-0.07□□□□□ -2.42
NUP98P52948 RNA5SP494-201ENST00000410653 129 ntBASIC-0.07□□□□□ -2.42
NUP98P52948 AC016909.1-201ENST00000415916 166 ntBASIC-0.07□□□□□ -2.42
NUP98P52948 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC-0.07□□□□□ -2.42
NUP98P52948 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC-0.07□□□□□ -2.42
NUP98P52948 U8.21-201ENST00000459536 136 ntBASIC-0.07□□□□□ -2.42
NUP98P52948 RPS29P27-201ENST00000463711 170 ntBASIC-0.07□□□□□ -2.42
NUP98P52948 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC-0.07□□□□□ -2.42
NUP98P52948 AC074133.1-201ENST00000515696 183 ntBASIC-0.07□□□□□ -2.42
NUP98P52948 RNU6-410P-201ENST00000517006 107 ntBASIC-0.07□□□□□ -2.42
NUP98P52948 AC069113.3-201ENST00000521019 150 ntBASIC-0.07□□□□□ -2.42
NUP98P52948 AP003168.1-201ENST00000530091 307 ntBASIC-0.07□□□□□ -2.42
NUP98P52948 MRPS36P4-201ENST00000534436 298 ntBASIC-0.07□□□□□ -2.42
NUP98P52948 AL121992.2-201ENST00000606262 256 ntBASIC-0.07□□□□□ -2.42
NUP98P52948 AC027279.3-201ENST00000625055 122 ntBASIC-0.07□□□□□ -2.42
NUP98P52948 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC-0.07□□□□□ -2.42
NUP98P52948 MIR101-1-201ENST00000362265 75 ntBASIC-0.08□□□□□ -2.42
NUP98P52948 RNU5B-2P-201ENST00000363036 113 ntBASIC-0.08□□□□□ -2.42
NUP98P52948 RNU6-715P-201ENST00000365204 103 ntBASIC-0.08□□□□□ -2.42
NUP98P52948 Y_RNA.598-201ENST00000410480 95 ntBASIC-0.08□□□□□ -2.42
NUP98P52948 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC-0.08□□□□□ -2.42
NUP98P52948 HMGN2P26-201ENST00000463169 339 ntBASIC-0.08□□□□□ -2.42
NUP98P52948 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC-0.08□□□□□ -2.42
NUP98P52948 Vault.3-201ENST00000516676 95 ntBASIC-0.08□□□□□ -2.42
NUP98P52948 AC027288.2-201ENST00000553028 243 ntBASIC-0.08□□□□□ -2.42
NUP98P52948 BNIP3P39-201ENST00000601077 554 ntBASIC-0.08□□□□□ -2.42
NUP98P52948 AC104010.1-201ENST00000616889 150 ntBASIC-0.08□□□□□ -2.42
NUP98P52948 ZNF204P-201ENST00000416749 2397 ntBASIC-0.08□□□□□ -2.42
NUP98P52948 MIR18A-201ENST00000362310 71 ntBASIC-0.08□□□□□ -2.42
NUP98P52948 SNORA9.1-201ENST00000362412 131 ntBASIC-0.08□□□□□ -2.42
NUP98P52948 RNU6-227P-201ENST00000362865 103 ntBASIC-0.08□□□□□ -2.42
NUP98P52948 RNA5SP98-201ENST00000363158 137 ntBASIC-0.08□□□□□ -2.42
NUP98P52948 RNU6-1286P-201ENST00000383871 107 ntBASIC-0.08□□□□□ -2.42
NUP98P52948 MIR214-201ENST00000385214 110 ntBASIC-0.08□□□□□ -2.42
NUP98P52948 MIR454-201ENST00000390180 115 ntBASIC-0.08□□□□□ -2.42
NUP98P52948 MIR1827-201ENST00000408549 66 ntBASIC-0.08□□□□□ -2.42
NUP98P52948 AC073261.1-201ENST00000429409 121 ntBASIC-0.08□□□□□ -2.42
NUP98P52948 CALM2P4-201ENST00000430810 426 ntBASIC-0.08□□□□□ -2.42
NUP98P52948 MTCO3P10-201ENST00000455912 772 ntBASIC-0.08□□□□□ -2.42
NUP98P52948 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC-0.08□□□□□ -2.42
NUP98P52948 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC-0.08□□□□□ -2.42
NUP98P52948 AC002044.1-201ENST00000606707 158 ntBASIC-0.08□□□□□ -2.42
NUP98P52948 RNU4-68P-201ENST00000364314 141 ntBASIC-0.09□□□□□ -2.42
NUP98P52948 Y_RNA.336-201ENST00000365307 109 ntBASIC-0.09□□□□□ -2.42
NUP98P52948 RNY1P8-201ENST00000383970 114 ntBASIC-0.09□□□□□ -2.42
NUP98P52948 RNU6-533P-201ENST00000384144 107 ntBASIC-0.09□□□□□ -2.42
NUP98P52948 RNU6-83P-201ENST00000384568 112 ntBASIC-0.09□□□□□ -2.42
NUP98P52948 MIR526A1-201ENST00000384897 85 ntBASIC-0.09□□□□□ -2.42
NUP98P52948 RNU4-46P-201ENST00000410818 138 ntBASIC-0.09□□□□□ -2.42
NUP98P52948 RN7SKP142-201ENST00000411236 328 ntBASIC-0.09□□□□□ -2.42
NUP98P52948 HMGN2P22-201ENST00000427588 175 ntBASIC-0.09□□□□□ -2.42
NUP98P52948 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC-0.09□□□□□ -2.42
NUP98P52948 AP000870.1-201ENST00000472927 406 ntBASIC-0.09□□□□□ -2.42
NUP98P52948 AC010469.2-201ENST00000496412 480 ntBASIC-0.09□□□□□ -2.42
NUP98P52948 AC105417.1-201ENST00000514691 285 ntBASIC-0.09□□□□□ -2.42
NUP98P52948 RNU2-46P-201ENST00000517038 113 ntBASIC-0.09□□□□□ -2.42
NUP98P52948 RNU6-58P-201ENST00000517143 103 ntBASIC-0.09□□□□□ -2.42
NUP98P52948 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC-0.09□□□□□ -2.42
NUP98P52948 MTND1P35-201ENST00000526739 508 ntBASIC-0.09□□□□□ -2.42
NUP98P52948 AC104383.1-201ENST00000530297 370 ntBASIC-0.09□□□□□ -2.42
NUP98P52948 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC-0.09□□□□□ -2.42
NUP98P52948 RPL21P9-201ENST00000556149 474 ntBASIC-0.09□□□□□ -2.42
NUP98P52948 MIR4300-201ENST00000581016 96 ntBASIC-0.09□□□□□ -2.42
NUP98P52948 MIR4775-201ENST00000581168 75 ntBASIC-0.09□□□□□ -2.42
NUP98P52948 AL607023.1-201ENST00000620045 248 ntBASIC-0.09□□□□□ -2.42
NUP98P52948 AC006435.5-201ENST00000624486 112 ntBASIC-0.09□□□□□ -2.42
NUP98P52948 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC-0.09□□□□□ -2.42
NUP98P52948 AC068137.4-201ENST00000638485 296 ntBASIC-0.09□□□□□ -2.42
NUP98P52948 AC006927.3-201ENST00000638789 384 ntBASIC-0.09□□□□□ -2.42
NUP98P52948 RNU6-501P-201ENST00000364072 100 ntBASIC-0.1□□□□□ -2.43
NUP98P52948 RNU6-514P-201ENST00000384208 107 ntBASIC-0.1□□□□□ -2.43
NUP98P52948 Y_RNA.571-201ENST00000384753 98 ntBASIC-0.1□□□□□ -2.43
NUP98P52948 AL365184.2-201ENST00000431139 435 ntBASIC-0.1□□□□□ -2.43
NUP98P52948 GPR143P-201ENST00000434155 205 ntBASIC-0.1□□□□□ -2.43
NUP98P52948 SCARNA18-201ENST00000459004 134 ntBASIC-0.1□□□□□ -2.43
NUP98P52948 RNA5SP454-201ENST00000517231 127 ntBASIC-0.1□□□□□ -2.43
NUP98P52948 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC-0.1□□□□□ -2.43
NUP98P52948 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC-0.1□□□□□ -2.43
NUP98P52948 MIR4645-201ENST00000583158 77 ntBASIC-0.1□□□□□ -2.43
NUP98P52948 AL355073.2-201ENST00000612106 557 ntBASIC-0.1□□□□□ -2.43
NUP98P52948 uc_338.34-201ENST00000617467 174 ntBASIC-0.1□□□□□ -2.43
NUP98P52948 MIR6079-201ENST00000635807 62 ntBASIC-0.1□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms