Protein–RNA interactions for Protein: P49917

LIG4, DNA ligase 4, humanhuman

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4P49917 RNA5SP323-201ENST00000391094 133 ntBASIC1.74□□□□□ -2.13
LIG4P49917 SNORA75.6-201ENST00000391318 127 ntBASIC1.74□□□□□ -2.13
LIG4P49917 UQCRBP2-201ENST00000447827 297 ntBASIC1.74□□□□□ -2.13
LIG4P49917 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.74□□□□□ -2.13
LIG4P49917 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC1.74□□□□□ -2.13
LIG4P49917 CYCSP23-201ENST00000519781 313 ntBASIC1.74□□□□□ -2.13
LIG4P49917 AC024995.1-201ENST00000523014 93 ntBASIC1.74□□□□□ -2.13
LIG4P49917 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.74□□□□□ -2.13
LIG4P49917 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.74□□□□□ -2.13
LIG4P49917 FRG2DP-202ENST00000566967 323 ntBASIC1.74□□□□□ -2.13
LIG4P49917 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.74□□□□□ -2.13
LIG4P49917 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.74□□□□□ -2.13
LIG4P49917 RNU6-1145P-201ENST00000384246 107 ntBASIC1.73□□□□□ -2.13
LIG4P49917 TOMM22P2-201ENST00000430735 237 ntBASIC1.73□□□□□ -2.13
LIG4P49917 AC073910.1-201ENST00000445047 438 ntBASIC1.73□□□□□ -2.13
LIG4P49917 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.73□□□□□ -2.13
LIG4P49917 MIR2053-201ENST00000459295 91 ntBASIC1.73□□□□□ -2.13
LIG4P49917 AC005908.1-201ENST00000468701 347 ntBASIC1.73□□□□□ -2.13
LIG4P49917 RPL26P26-201ENST00000480251 434 ntBASIC1.73□□□□□ -2.13
LIG4P49917 RNU6-264P-201ENST00000517134 104 ntBASIC1.73□□□□□ -2.13
LIG4P49917 SNORD53B-201ENST00000577887 78 ntBASIC1.73□□□□□ -2.13
LIG4P49917 AC022432.1-201ENST00000595739 310 ntBASIC1.73□□□□□ -2.13
LIG4P49917 BX248123.2-201ENST00000606318 124 ntBASIC1.73□□□□□ -2.13
LIG4P49917 AL357075.2-201ENST00000614906 189 ntBASIC1.73□□□□□ -2.13
LIG4P49917 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
LIG4P49917 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.72□□□□□ -2.13
LIG4P49917 Y_RNA.303-201ENST00000364998 94 ntBASIC1.72□□□□□ -2.13
LIG4P49917 RNU6-890P-201ENST00000384121 107 ntBASIC1.72□□□□□ -2.13
LIG4P49917 MIR1267-201ENST00000408723 78 ntBASIC1.72□□□□□ -2.13
LIG4P49917 AL163195.1-201ENST00000496941 348 ntBASIC1.72□□□□□ -2.13
LIG4P49917 AC022493.2-201ENST00000506122 481 ntBASIC1.72□□□□□ -2.13
LIG4P49917 MIR4801-201ENST00000582704 82 ntBASIC1.72□□□□□ -2.13
LIG4P49917 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
LIG4P49917 AC016925.2-201ENST00000605108 242 ntBASIC1.72□□□□□ -2.13
LIG4P49917 AL359075.3-201ENST00000613288 217 ntBASIC1.72□□□□□ -2.13
LIG4P49917 AC104260.1-201ENST00000616660 539 ntBASIC1.72□□□□□ -2.13
LIG4P49917 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.72□□□□□ -2.13
LIG4P49917 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.71□□□□□ -2.14
LIG4P49917 RNU6-1297P-201ENST00000384415 104 ntBASIC1.71□□□□□ -2.14
LIG4P49917 Y_RNA.577-201ENST00000384794 101 ntBASIC1.71□□□□□ -2.14
LIG4P49917 RNU6-482P-201ENST00000391068 107 ntBASIC1.71□□□□□ -2.14
LIG4P49917 MIR934-201ENST00000401241 83 ntBASIC1.71□□□□□ -2.14
LIG4P49917 ELOCP21-201ENST00000412558 336 ntBASIC1.71□□□□□ -2.14
LIG4P49917 FTH1P12-201ENST00000432137 551 ntBASIC1.71□□□□□ -2.14
LIG4P49917 MTCO3P10-201ENST00000455912 772 ntBASIC1.71□□□□□ -2.14
LIG4P49917 RPL30P15-201ENST00000457129 321 ntBASIC1.71□□□□□ -2.14
LIG4P49917 Y_RNA.653-201ENST00000459091 95 ntBASIC1.71□□□□□ -2.14
LIG4P49917 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC1.71□□□□□ -2.14
LIG4P49917 RNU6-277P-201ENST00000516272 106 ntBASIC1.71□□□□□ -2.14
LIG4P49917 RN7SKP49-201ENST00000516675 260 ntBASIC1.71□□□□□ -2.14
LIG4P49917 RNU1-142P-201ENST00000516682 145 ntBASIC1.71□□□□□ -2.14
LIG4P49917 AL137100.2-201ENST00000555786 315 ntBASIC1.71□□□□□ -2.14
LIG4P49917 SUB1P3-201ENST00000564581 315 ntBASIC1.71□□□□□ -2.14
LIG4P49917 U6.108-201ENST00000637764 58 ntBASIC1.71□□□□□ -2.14
LIG4P49917 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.71□□□□□ -2.14
LIG4P49917 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
LIG4P49917 RNA5SP363-201ENST00000365072 115 ntBASIC1.7□□□□□ -2.14
LIG4P49917 SNORA4.2-201ENST00000365313 147 ntBASIC1.7□□□□□ -2.14
LIG4P49917 RNU6-338P-201ENST00000383888 105 ntBASIC1.7□□□□□ -2.14
LIG4P49917 RNU6-1264P-201ENST00000383891 107 ntBASIC1.7□□□□□ -2.14
LIG4P49917 Y_RNA.387-201ENST00000383918 102 ntBASIC1.7□□□□□ -2.14
LIG4P49917 RNU6-318P-201ENST00000384283 103 ntBASIC1.7□□□□□ -2.14
LIG4P49917 MIR625-201ENST00000385047 85 ntBASIC1.7□□□□□ -2.14
LIG4P49917 SNORA67.5-201ENST00000391036 107 ntBASIC1.7□□□□□ -2.14
LIG4P49917 RNU6-1156P-201ENST00000410365 100 ntBASIC1.7□□□□□ -2.14
LIG4P49917 AC114482.1-201ENST00000418010 247 ntBASIC1.7□□□□□ -2.14
LIG4P49917 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC1.7□□□□□ -2.14
LIG4P49917 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.7□□□□□ -2.14
LIG4P49917 JTBP1-201ENST00000441314 247 ntBASIC1.7□□□□□ -2.14
LIG4P49917 PCNPP5-201ENST00000452246 481 ntBASIC1.7□□□□□ -2.14
LIG4P49917 snoU13.9-201ENST00000458927 103 ntBASIC1.7□□□□□ -2.14
LIG4P49917 SNORD65B-201ENST00000459126 73 ntBASIC1.7□□□□□ -2.14
LIG4P49917 snoU13.27-201ENST00000459278 104 ntBASIC1.7□□□□□ -2.14
LIG4P49917 AC091951.2-201ENST00000500762 203 ntBASIC1.7□□□□□ -2.14
LIG4P49917 AC074133.1-201ENST00000515696 183 ntBASIC1.7□□□□□ -2.14
LIG4P49917 MIR4769-201ENST00000584126 77 ntBASIC1.7□□□□□ -2.14
LIG4P49917 AC025253.1-201ENST00000613623 543 ntBASIC1.7□□□□□ -2.14
LIG4P49917 MTND4LP32-201ENST00000636111 270 ntBASIC1.7□□□□□ -2.14
LIG4P49917 MIR1302-1-201ENST00000637932 143 ntBASIC1.7□□□□□ -2.14
LIG4P49917 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
LIG4P49917 AC100821.1-201ENST00000523153 2479 ntBASIC1.69□□□□□ -2.14
LIG4P49917 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
LIG4P49917 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
LIG4P49917 RNA5SP109-201ENST00000391010 116 ntBASIC1.69□□□□□ -2.14
LIG4P49917 RNU6-1186P-201ENST00000410429 97 ntBASIC1.69□□□□□ -2.14
LIG4P49917 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC1.69□□□□□ -2.14
LIG4P49917 AC005002.2-201ENST00000438228 269 ntBASIC1.69□□□□□ -2.14
LIG4P49917 RNU6-470P-201ENST00000515954 104 ntBASIC1.69□□□□□ -2.14
LIG4P49917 SNORA77B-201ENST00000578179 125 ntBASIC1.69□□□□□ -2.14
LIG4P49917 MIR3124-201ENST00000582636 67 ntBASIC1.69□□□□□ -2.14
LIG4P49917 AC080078.3-201ENST00000605407 463 ntBASIC1.69□□□□□ -2.14
LIG4P49917 AL132765.2-201ENST00000610812 351 ntBASIC1.69□□□□□ -2.14
LIG4P49917 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.69□□□□□ -2.14
LIG4P49917 AC133104.2-201ENST00000615272 193 ntBASIC1.69□□□□□ -2.14
LIG4P49917 U6.73-201ENST00000619194 103 ntBASIC1.69□□□□□ -2.14
LIG4P49917 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.69□□□□□ -2.14
LIG4P49917 ZNF72P-201ENST00000425869 1908 ntBASIC1.69□□□□□ -2.14
LIG4P49917 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
LIG4P49917 RNU6-457P-201ENST00000363999 107 ntBASIC1.68□□□□□ -2.14
LIG4P49917 MIR517C-201ENST00000385103 95 ntBASIC1.68□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms