Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 SNORD78.2-201ENST00000391076 69 ntBASIC2.01□□□□□ -2.09
CLK1P49759 AL079342.1-201ENST00000401460 267 ntBASIC2.01□□□□□ -2.09
CLK1P49759 RPL21P38-201ENST00000418090 167 ntBASIC2.01□□□□□ -2.09
CLK1P49759 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC2.01□□□□□ -2.09
CLK1P49759 TRAPPC2P8-201ENST00000440676 396 ntBASIC2.01□□□□□ -2.09
CLK1P49759 AL021397.1-201ENST00000451806 248 ntBASIC2.01□□□□□ -2.09
CLK1P49759 PCNPP5-201ENST00000452246 481 ntBASIC2.01□□□□□ -2.09
CLK1P49759 RN7SKP49-201ENST00000516675 260 ntBASIC2.01□□□□□ -2.09
CLK1P49759 RNU6-567P-201ENST00000516746 107 ntBASIC2.01□□□□□ -2.09
CLK1P49759 SNORA40.15-201ENST00000516884 107 ntBASIC2.01□□□□□ -2.09
CLK1P49759 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC2.01□□□□□ -2.09
CLK1P49759 AC093023.1-201ENST00000547375 507 ntBASIC2.01□□□□□ -2.09
CLK1P49759 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC2.01□□□□□ -2.09
CLK1P49759 MIR4659A-201ENST00000580269 81 ntBASIC2.01□□□□□ -2.09
CLK1P49759 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2□□□□□ -2.09
CLK1P49759 MIR449A-201ENST00000362113 91 ntBASIC2□□□□□ -2.09
CLK1P49759 RNU6-873P-201ENST00000363833 107 ntBASIC2□□□□□ -2.09
CLK1P49759 RNU6-879P-201ENST00000364328 108 ntBASIC2□□□□□ -2.09
CLK1P49759 RNU6-1145P-201ENST00000384246 107 ntBASIC2□□□□□ -2.09
CLK1P49759 Y_RNA.461-201ENST00000384263 103 ntBASIC2□□□□□ -2.09
CLK1P49759 RNU6-541P-201ENST00000384709 110 ntBASIC2□□□□□ -2.09
CLK1P49759 MT-TG-201ENST00000387429 68 ntBASIC2□□□□□ -2.09
CLK1P49759 SNORD115-46-201ENST00000390982 71 ntBASIC2□□□□□ -2.09
CLK1P49759 MRPL35P1-201ENST00000404272 572 ntBASIC2□□□□□ -2.09
CLK1P49759 Y_RNA.597-201ENST00000410463 100 ntBASIC2□□□□□ -2.09
CLK1P49759 AC098869.1-201ENST00000481627 292 ntBASIC2□□□□□ -2.09
CLK1P49759 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2□□□□□ -2.09
CLK1P49759 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2□□□□□ -2.09
CLK1P49759 RNU6-408P-201ENST00000515910 100 ntBASIC2□□□□□ -2.09
CLK1P49759 RNY3P15-201ENST00000516297 97 ntBASIC2□□□□□ -2.09
CLK1P49759 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC2□□□□□ -2.09
CLK1P49759 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC2□□□□□ -2.09
CLK1P49759 DEFB131C-201ENST00000528817 165 ntBASIC2□□□□□ -2.09
CLK1P49759 AP003733.2-201ENST00000529409 171 ntBASIC2□□□□□ -2.09
CLK1P49759 MIR3923-201ENST00000579521 83 ntBASIC2□□□□□ -2.09
CLK1P49759 MIR4300-201ENST00000581016 96 ntBASIC2□□□□□ -2.09
CLK1P49759 MIR4435-1-201ENST00000582552 80 ntBASIC2□□□□□ -2.09
CLK1P49759 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC2□□□□□ -2.09
CLK1P49759 PCGEM1.1-201ENST00000613431 131 ntBASIC2□□□□□ -2.09
CLK1P49759 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC2□□□□□ -2.09
CLK1P49759 AL357075.2-201ENST00000614906 189 ntBASIC2□□□□□ -2.09
CLK1P49759 BX322639.1-202ENST00000423987 2213 ntBASIC2□□□□□ -2.09
CLK1P49759 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
CLK1P49759 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.99□□□□□ -2.09
CLK1P49759 snoU2_19.2-201ENST00000363024 80 ntBASIC1.99□□□□□ -2.09
CLK1P49759 RNU6-1164P-201ENST00000364428 107 ntBASIC1.99□□□□□ -2.09
CLK1P49759 RNU6-160P-201ENST00000384591 107 ntBASIC1.99□□□□□ -2.09
CLK1P49759 MIR30A-201ENST00000385092 71 ntBASIC1.99□□□□□ -2.09
CLK1P49759 MIR221-201ENST00000385135 110 ntBASIC1.99□□□□□ -2.09
CLK1P49759 MIR208B-201ENST00000401172 77 ntBASIC1.99□□□□□ -2.09
CLK1P49759 SNORD12B-201ENST00000410433 91 ntBASIC1.99□□□□□ -2.09
CLK1P49759 RNA5SP338-201ENST00000410495 85 ntBASIC1.99□□□□□ -2.09
CLK1P49759 RNA5SP501-201ENST00000410990 112 ntBASIC1.99□□□□□ -2.09
CLK1P49759 AC004866.1-201ENST00000411748 78 ntBASIC1.99□□□□□ -2.09
CLK1P49759 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.99□□□□□ -2.09
CLK1P49759 RNA5SP54-201ENST00000516951 92 ntBASIC1.99□□□□□ -2.09
CLK1P49759 AC023157.2-201ENST00000540596 141 ntBASIC1.99□□□□□ -2.09
CLK1P49759 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC1.99□□□□□ -2.09
CLK1P49759 AL590808.1-201ENST00000618696 141 ntBASIC1.99□□□□□ -2.09
CLK1P49759 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.99□□□□□ -2.09
CLK1P49759 ZNF204P-201ENST00000416749 2397 ntBASIC1.99□□□□□ -2.09
CLK1P49759 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.98□□□□□ -2.09
CLK1P49759 RNU6-926P-201ENST00000384075 107 ntBASIC1.98□□□□□ -2.09
CLK1P49759 Y_RNA.439-201ENST00000384119 94 ntBASIC1.98□□□□□ -2.09
CLK1P49759 RNU6-713P-201ENST00000384761 107 ntBASIC1.98□□□□□ -2.09
CLK1P49759 MIR215-201ENST00000384858 110 ntBASIC1.98□□□□□ -2.09
CLK1P49759 RNU6-1093P-201ENST00000391194 107 ntBASIC1.98□□□□□ -2.09
CLK1P49759 AL357139.1-201ENST00000407792 426 ntBASIC1.98□□□□□ -2.09
CLK1P49759 HSPE1P21-201ENST00000438283 308 ntBASIC1.98□□□□□ -2.09
CLK1P49759 AC145146.1-201ENST00000496370 254 ntBASIC1.98□□□□□ -2.09
CLK1P49759 AC093259.1-201ENST00000509755 300 ntBASIC1.98□□□□□ -2.09
CLK1P49759 MTND1P19-201ENST00000511780 315 ntBASIC1.98□□□□□ -2.09
CLK1P49759 RNU6-1143P-201ENST00000516125 104 ntBASIC1.98□□□□□ -2.09
CLK1P49759 SCARNA16.3-201ENST00000516595 184 ntBASIC1.98□□□□□ -2.09
CLK1P49759 RNU6-1198P-201ENST00000516904 67 ntBASIC1.98□□□□□ -2.09
CLK1P49759 CBX3P4-201ENST00000538909 354 ntBASIC1.98□□□□□ -2.09
CLK1P49759 AC110588.1-201ENST00000559699 137 ntBASIC1.98□□□□□ -2.09
CLK1P49759 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.98□□□□□ -2.09
CLK1P49759 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC1.98□□□□□ -2.09
CLK1P49759 MIR4423-201ENST00000580922 80 ntBASIC1.98□□□□□ -2.09
CLK1P49759 MIR4285-201ENST00000581001 85 ntBASIC1.98□□□□□ -2.09
CLK1P49759 MIR4513-201ENST00000581077 86 ntBASIC1.98□□□□□ -2.09
CLK1P49759 AC103810.8-201ENST00000607347 118 ntBASIC1.98□□□□□ -2.09
CLK1P49759 AC062037.2-201ENST00000610137 73 ntBASIC1.98□□□□□ -2.09
CLK1P49759 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.98□□□□□ -2.09
CLK1P49759 NAA50-211ENST00000630058 177 ntTSL 5 BASIC1.98□□□□□ -2.09
CLK1P49759 AC092881.1-201ENST00000638218 2733 ntBASIC1.97□□□□□ -2.09
CLK1P49759 Y_RNA.84-201ENST00000363011 104 ntBASIC1.97□□□□□ -2.09
CLK1P49759 RNU6-23P-201ENST00000363283 107 ntBASIC1.97□□□□□ -2.09
CLK1P49759 Y_RNA.143-201ENST00000363520 106 ntBASIC1.97□□□□□ -2.09
CLK1P49759 RNU4-56P-201ENST00000364700 142 ntBASIC1.97□□□□□ -2.09
CLK1P49759 Y_RNA.307-201ENST00000365022 117 ntBASIC1.97□□□□□ -2.09
CLK1P49759 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
CLK1P49759 MIR1294-201ENST00000408503 142 ntBASIC1.97□□□□□ -2.09
CLK1P49759 Y_RNA.618-201ENST00000410949 107 ntBASIC1.97□□□□□ -2.09
CLK1P49759 AC005002.2-201ENST00000438228 269 ntBASIC1.97□□□□□ -2.09
CLK1P49759 AC007395.1-201ENST00000451333 677 ntBASIC1.97□□□□□ -2.09
CLK1P49759 AC091179.3-201ENST00000474761 144 ntBASIC1.97□□□□□ -2.09
CLK1P49759 Y_RNA.680-201ENST00000516441 93 ntBASIC1.97□□□□□ -2.09
CLK1P49759 RNU6-570P-201ENST00000517051 105 ntBASIC1.97□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 116.1 ms