Protein–RNA interactions for Protein: P49642

PRIM1, DNA primase small subunit, humanhuman

Known RBP Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1P49642 MIR423-201ENST00000362201 94 ntBASIC4.62□□□□□ -1.67
PRIM1P49642 UBE2DNL-203ENST00000474922 222 ntBASIC4.62□□□□□ -1.67
PRIM1P49642 TRBV12-2-201ENST00000489763 344 ntBASIC4.62□□□□□ -1.67
PRIM1P49642 RNA5SP112-201ENST00000515937 99 ntBASIC4.62□□□□□ -1.67
PRIM1P49642 AC007751.1-201ENST00000529260 376 ntBASIC4.62□□□□□ -1.67
PRIM1P49642 PRELID2P1-201ENST00000552837 301 ntBASIC4.62□□□□□ -1.67
PRIM1P49642 RNU6-94P-201ENST00000607728 107 ntBASIC4.62□□□□□ -1.67
PRIM1P49642 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC4.62□□□□□ -1.67
PRIM1P49642 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.62□□□□□ -1.67
PRIM1P49642 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
PRIM1P49642 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC4.61□□□□□ -1.67
PRIM1P49642 Y_RNA.66-201ENST00000362862 102 ntBASIC4.61□□□□□ -1.67
PRIM1P49642 RNU6-640P-201ENST00000363693 105 ntBASIC4.61□□□□□ -1.67
PRIM1P49642 Z98941.1-201ENST00000407764 100 ntBASIC4.61□□□□□ -1.67
PRIM1P49642 MIR1289-1-201ENST00000408836 144 ntBASIC4.61□□□□□ -1.67
PRIM1P49642 RNY4P29-201ENST00000410801 97 ntBASIC4.61□□□□□ -1.67
PRIM1P49642 AC011604.1-201ENST00000545978 196 ntBASIC4.61□□□□□ -1.67
PRIM1P49642 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC4.61□□□□□ -1.67
PRIM1P49642 AC002064.3-201ENST00000623448 346 ntBASIC4.61□□□□□ -1.67
PRIM1P49642 AC090517.3-201ENST00000625170 141 ntBASIC4.61□□□□□ -1.67
PRIM1P49642 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
PRIM1P49642 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC4.61□□□□□ -1.67
PRIM1P49642 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
PRIM1P49642 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
PRIM1P49642 RNU1-22P-201ENST00000363334 158 ntBASIC4.6□□□□□ -1.67
PRIM1P49642 SNORD24-201ENST00000383884 75 ntBASIC4.6□□□□□ -1.67
PRIM1P49642 Y_RNA.510-201ENST00000384511 114 ntBASIC4.6□□□□□ -1.67
PRIM1P49642 NDUFB1P1-201ENST00000435191 180 ntBASIC4.6□□□□□ -1.67
PRIM1P49642 RPS4XP11-201ENST00000446897 772 ntBASIC4.6□□□□□ -1.67
PRIM1P49642 RNA5SP236-201ENST00000516169 116 ntBASIC4.6□□□□□ -1.67
PRIM1P49642 MIR5680-201ENST00000577577 84 ntBASIC4.6□□□□□ -1.67
PRIM1P49642 MIR4325-201ENST00000583049 90 ntBASIC4.6□□□□□ -1.67
PRIM1P49642 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC4.6□□□□□ -1.67
PRIM1P49642 AC107294.3-201ENST00000609211 526 ntBASIC4.6□□□□□ -1.67
PRIM1P49642 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
PRIM1P49642 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
PRIM1P49642 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
PRIM1P49642 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
PRIM1P49642 RNU6-508P-201ENST00000363231 103 ntBASIC4.59□□□□□ -1.67
PRIM1P49642 Y_RNA.323-201ENST00000365157 109 ntBASIC4.59□□□□□ -1.67
PRIM1P49642 Y_RNA.486-201ENST00000384398 107 ntBASIC4.59□□□□□ -1.67
PRIM1P49642 MIR520G-201ENST00000385064 90 ntBASIC4.59□□□□□ -1.67
PRIM1P49642 AL138878.1-201ENST00000405131 347 ntBASIC4.59□□□□□ -1.67
PRIM1P49642 HSPE1P26-201ENST00000405341 275 ntBASIC4.59□□□□□ -1.67
PRIM1P49642 AC016717.1-201ENST00000448918 286 ntBASIC4.59□□□□□ -1.67
PRIM1P49642 S100A11P2-201ENST00000467589 312 ntBASIC4.59□□□□□ -1.67
PRIM1P49642 AC097462.1-201ENST00000514125 324 ntBASIC4.59□□□□□ -1.67
PRIM1P49642 RNU7-172P-201ENST00000517125 64 ntBASIC4.59□□□□□ -1.67
PRIM1P49642 SNORA31.21-201ENST00000517180 77 ntBASIC4.59□□□□□ -1.67
PRIM1P49642 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.59□□□□□ -1.67
PRIM1P49642 AL355596.1-201ENST00000565399 3996 ntBASIC4.59□□□□□ -1.67
PRIM1P49642 AC103810.1-201ENST00000579873 453 ntBASIC4.59□□□□□ -1.67
PRIM1P49642 AC244205.2-202ENST00000635781 342 ntBASIC4.59□□□□□ -1.67
PRIM1P49642 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
PRIM1P49642 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC4.59□□□□□ -1.68
PRIM1P49642 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.59□□□□□ -1.68
PRIM1P49642 AC068647.1-201ENST00000489539 2265 ntBASIC4.58□□□□□ -1.68
PRIM1P49642 RNU1-105P-201ENST00000363470 161 ntBASIC4.58□□□□□ -1.68
PRIM1P49642 RNU6-1014P-201ENST00000383940 103 ntBASIC4.58□□□□□ -1.68
PRIM1P49642 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
PRIM1P49642 MIR1183-201ENST00000408856 89 ntBASIC4.58□□□□□ -1.68
PRIM1P49642 RHEBP3-201ENST00000411920 351 ntBASIC4.58□□□□□ -1.68
PRIM1P49642 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC4.58□□□□□ -1.68
PRIM1P49642 TRBV25OR9-2-201ENST00000438417 374 ntBASIC4.58□□□□□ -1.68
PRIM1P49642 AL137067.1-201ENST00000615933 120 ntBASIC4.58□□□□□ -1.68
PRIM1P49642 MIR2052-201ENST00000636055 55 ntBASIC4.58□□□□□ -1.68
PRIM1P49642 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
PRIM1P49642 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
PRIM1P49642 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
PRIM1P49642 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
PRIM1P49642 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
PRIM1P49642 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
PRIM1P49642 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
PRIM1P49642 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
PRIM1P49642 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
PRIM1P49642 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC4.57□□□□□ -1.68
PRIM1P49642 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC4.57□□□□□ -1.68
PRIM1P49642 RNU6-438P-201ENST00000365561 103 ntBASIC4.57□□□□□ -1.68
PRIM1P49642 CALM2P4-201ENST00000430810 426 ntBASIC4.57□□□□□ -1.68
PRIM1P49642 AC006445.1-201ENST00000491925 405 ntBASIC4.57□□□□□ -1.68
PRIM1P49642 IGKV1-22-201ENST00000524313 326 ntBASIC4.57□□□□□ -1.68
PRIM1P49642 MIR4438-201ENST00000585271 93 ntBASIC4.57□□□□□ -1.68
PRIM1P49642 uc_338.32-201ENST00000615087 172 ntBASIC4.57□□□□□ -1.68
PRIM1P49642 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
PRIM1P49642 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
PRIM1P49642 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
PRIM1P49642 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC4.57□□□□□ -1.68
PRIM1P49642 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
PRIM1P49642 AC027290.2-201ENST00000623210 18662 ntBASIC4.56□□□□□ -1.68
PRIM1P49642 AL136360.1-201ENST00000503377 1900 ntBASIC4.56□□□□□ -1.68
PRIM1P49642 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC4.56□□□□□ -1.68
PRIM1P49642 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
PRIM1P49642 RNY4P6-201ENST00000363667 96 ntBASIC4.56□□□□□ -1.68
PRIM1P49642 MIR759-201ENST00000390224 91 ntBASIC4.56□□□□□ -1.68
PRIM1P49642 RNU2-37P-201ENST00000410695 177 ntBASIC4.56□□□□□ -1.68
PRIM1P49642 HMGN2P32-201ENST00000444648 269 ntBASIC4.56□□□□□ -1.68
PRIM1P49642 AP003327.1-201ENST00000529684 127 ntBASIC4.56□□□□□ -1.68
PRIM1P49642 MIR3129-201ENST00000581095 76 ntBASIC4.56□□□□□ -1.68
PRIM1P49642 U6.73-201ENST00000619194 103 ntBASIC4.56□□□□□ -1.68
PRIM1P49642 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms