Protein–RNA interactions for Protein: P48553

TRAPPC10, Trafficking protein particle complex subunit 10, humanhuman

Predictions only

Length 1,259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC10P48553 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC2.19□□□□□ -2.06
TRAPPC10P48553 AL137100.2-201ENST00000555786 315 ntBASIC2.19□□□□□ -2.06
TRAPPC10P48553 MIR3935-201ENST00000583472 104 ntBASIC2.19□□□□□ -2.06
TRAPPC10P48553 AC103810.8-201ENST00000607347 118 ntBASIC2.19□□□□□ -2.06
TRAPPC10P48553 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.19□□□□□ -2.06
TRAPPC10P48553 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.19□□□□□ -2.06
TRAPPC10P48553 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
TRAPPC10P48553 RNU4-73P-201ENST00000363164 141 ntBASIC2.18□□□□□ -2.06
TRAPPC10P48553 Y_RNA.428-201ENST00000384078 102 ntBASIC2.18□□□□□ -2.06
TRAPPC10P48553 RNU6-296P-201ENST00000384608 107 ntBASIC2.18□□□□□ -2.06
TRAPPC10P48553 MIR628-201ENST00000385229 95 ntBASIC2.18□□□□□ -2.06
TRAPPC10P48553 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
TRAPPC10P48553 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC2.18□□□□□ -2.06
TRAPPC10P48553 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC2.18□□□□□ -2.06
TRAPPC10P48553 AC105758.1-201ENST00000506038 399 ntBASIC2.18□□□□□ -2.06
TRAPPC10P48553 SNORA40.9-201ENST00000515895 93 ntBASIC2.18□□□□□ -2.06
TRAPPC10P48553 RNU6-976P-201ENST00000516086 111 ntBASIC2.18□□□□□ -2.06
TRAPPC10P48553 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC2.18□□□□□ -2.06
TRAPPC10P48553 AC093027.1-201ENST00000546698 429 ntBASIC2.18□□□□□ -2.06
TRAPPC10P48553 AC018448.1-201ENST00000552843 316 ntBASIC2.18□□□□□ -2.06
TRAPPC10P48553 AL442163.3-201ENST00000554110 156 ntBASIC2.18□□□□□ -2.06
TRAPPC10P48553 AC015712.3-201ENST00000559380 164 ntBASIC2.18□□□□□ -2.06
TRAPPC10P48553 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.18□□□□□ -2.06
TRAPPC10P48553 MIR3198-2-201ENST00000577868 80 ntBASIC2.18□□□□□ -2.06
TRAPPC10P48553 AL359075.3-201ENST00000613288 217 ntBASIC2.18□□□□□ -2.06
TRAPPC10P48553 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.18□□□□□ -2.06
TRAPPC10P48553 ZNF72P-201ENST00000425869 1908 ntBASIC2.18□□□□□ -2.06
TRAPPC10P48553 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
TRAPPC10P48553 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.18□□□□□ -2.06
TRAPPC10P48553 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
TRAPPC10P48553 Y_RNA.287-201ENST00000364853 94 ntBASIC2.17□□□□□ -2.06
TRAPPC10P48553 Y_RNA.314-201ENST00000365114 102 ntBASIC2.17□□□□□ -2.06
TRAPPC10P48553 Y_RNA.431-201ENST00000384086 102 ntBASIC2.17□□□□□ -2.06
TRAPPC10P48553 RNU6-1310P-201ENST00000384153 107 ntBASIC2.17□□□□□ -2.06
TRAPPC10P48553 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
TRAPPC10P48553 RNU11-5P-201ENST00000391216 129 ntBASIC2.17□□□□□ -2.06
TRAPPC10P48553 SNORD12B-201ENST00000410433 91 ntBASIC2.17□□□□□ -2.06
TRAPPC10P48553 Y_RNA.605-201ENST00000410577 105 ntBASIC2.17□□□□□ -2.06
TRAPPC10P48553 ELOCP21-201ENST00000412558 336 ntBASIC2.17□□□□□ -2.06
TRAPPC10P48553 TRAPPC2P8-201ENST00000440676 396 ntBASIC2.17□□□□□ -2.06
TRAPPC10P48553 RNU6-625P-201ENST00000459412 107 ntBASIC2.17□□□□□ -2.06
TRAPPC10P48553 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.17□□□□□ -2.06
TRAPPC10P48553 SRP72-202ENST00000504757 745 ntTSL 2 BASIC2.17□□□□□ -2.06
TRAPPC10P48553 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC2.17□□□□□ -2.06
TRAPPC10P48553 RNU6-120P-201ENST00000516077 103 ntBASIC2.17□□□□□ -2.06
TRAPPC10P48553 SNORA31.17-201ENST00000516953 127 ntBASIC2.17□□□□□ -2.06
TRAPPC10P48553 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC2.17□□□□□ -2.06
TRAPPC10P48553 AC084364.2-201ENST00000546924 395 ntBASIC2.17□□□□□ -2.06
TRAPPC10P48553 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.17□□□□□ -2.06
TRAPPC10P48553 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
TRAPPC10P48553 RNU6-1115P-201ENST00000362490 106 ntBASIC2.16□□□□□ -2.06
TRAPPC10P48553 RNU4-42P-201ENST00000364738 142 ntBASIC2.16□□□□□ -2.06
TRAPPC10P48553 Y_RNA.463-201ENST00000384271 102 ntBASIC2.16□□□□□ -2.06
TRAPPC10P48553 Y_RNA.498-201ENST00000384460 102 ntBASIC2.16□□□□□ -2.06
TRAPPC10P48553 SUMO2P12-201ENST00000405924 140 ntBASIC2.16□□□□□ -2.06
TRAPPC10P48553 AF228730.4-201ENST00000421457 183 ntBASIC2.16□□□□□ -2.06
TRAPPC10P48553 AC107393.1-201ENST00000512403 346 ntBASIC2.16□□□□□ -2.06
TRAPPC10P48553 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC2.16□□□□□ -2.06
TRAPPC10P48553 SNORD116.3-201ENST00000517176 78 ntBASIC2.16□□□□□ -2.06
TRAPPC10P48553 U2.1-201ENST00000618978 145 ntBASIC2.16□□□□□ -2.06
TRAPPC10P48553 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.15□□□□□ -2.06
TRAPPC10P48553 AL356292.1-201ENST00000283110 373 ntBASIC2.15□□□□□ -2.07
TRAPPC10P48553 RNU1-115P-201ENST00000365329 160 ntBASIC2.15□□□□□ -2.07
TRAPPC10P48553 RNU6-417P-201ENST00000384712 107 ntBASIC2.15□□□□□ -2.07
TRAPPC10P48553 RNA5SP323-201ENST00000391094 133 ntBASIC2.15□□□□□ -2.07
TRAPPC10P48553 MIR1289-2-201ENST00000408360 111 ntBASIC2.15□□□□□ -2.07
TRAPPC10P48553 RNU2-7P-201ENST00000410794 178 ntBASIC2.15□□□□□ -2.07
TRAPPC10P48553 MTCO3P19-201ENST00000415864 321 ntBASIC2.15□□□□□ -2.07
TRAPPC10P48553 AL591806.2-201ENST00000433122 173 ntBASIC2.15□□□□□ -2.07
TRAPPC10P48553 FCF1P4-201ENST00000448326 183 ntBASIC2.15□□□□□ -2.07
TRAPPC10P48553 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.15□□□□□ -2.07
TRAPPC10P48553 RPL36AP21-201ENST00000490372 323 ntBASIC2.15□□□□□ -2.07
TRAPPC10P48553 AC010598.1-201ENST00000510378 103 ntBASIC2.15□□□□□ -2.07
TRAPPC10P48553 AC025465.3-201ENST00000510570 311 ntBASIC2.15□□□□□ -2.07
TRAPPC10P48553 RNU6-699P-201ENST00000517081 110 ntBASIC2.15□□□□□ -2.07
TRAPPC10P48553 MIR4795-201ENST00000584182 89 ntBASIC2.15□□□□□ -2.07
TRAPPC10P48553 VN1R91P-201ENST00000594377 169 ntBASIC2.15□□□□□ -2.07
TRAPPC10P48553 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.15□□□□□ -2.07
TRAPPC10P48553 AL117336.2-201ENST00000602435 335 ntBASIC2.15□□□□□ -2.07
TRAPPC10P48553 SNRPGP19-201ENST00000603826 189 ntBASIC2.15□□□□□ -2.07
TRAPPC10P48553 AL357075.2-201ENST00000614906 189 ntBASIC2.15□□□□□ -2.07
TRAPPC10P48553 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.15□□□□□ -2.07
TRAPPC10P48553 WWP1P1-201ENST00000466609 2769 ntBASIC2.14□□□□□ -2.07
TRAPPC10P48553 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.14□□□□□ -2.07
TRAPPC10P48553 RNU4-79P-201ENST00000362764 141 ntBASIC2.14□□□□□ -2.07
TRAPPC10P48553 Y_RNA.252-201ENST00000364556 101 ntBASIC2.14□□□□□ -2.07
TRAPPC10P48553 SNORD78.2-201ENST00000391076 69 ntBASIC2.14□□□□□ -2.07
TRAPPC10P48553 AC019129.1-201ENST00000403786 261 ntBASIC2.14□□□□□ -2.07
TRAPPC10P48553 MRPS18CP6-201ENST00000423587 223 ntBASIC2.14□□□□□ -2.07
TRAPPC10P48553 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.14□□□□□ -2.07
TRAPPC10P48553 HMGB3P17-201ENST00000504195 649 ntBASIC2.14□□□□□ -2.07
TRAPPC10P48553 HMGN1P13-201ENST00000505795 138 ntBASIC2.14□□□□□ -2.07
TRAPPC10P48553 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
TRAPPC10P48553 RNA5SP182-201ENST00000516064 82 ntBASIC2.14□□□□□ -2.07
TRAPPC10P48553 Y_RNA.675-201ENST00000516389 149 ntBASIC2.14□□□□□ -2.07
TRAPPC10P48553 RNU1-142P-201ENST00000516682 145 ntBASIC2.14□□□□□ -2.07
TRAPPC10P48553 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC2.14□□□□□ -2.07
TRAPPC10P48553 RAB11AP2-201ENST00000545905 639 ntBASIC2.14□□□□□ -2.07
TRAPPC10P48553 CENPF-206ENST00000614578 528 ntTSL 5 BASIC2.14□□□□□ -2.07
TRAPPC10P48553 MIR3674-201ENST00000636576 68 ntBASIC2.14□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms