Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 MIR3684-201ENST00000579779 74 ntBASIC2.41□□□□□ -2.02
TM4SF4P48230 AL390123.1-201ENST00000603216 237 ntBASIC2.41□□□□□ -2.02
TM4SF4P48230 AC138305.3-201ENST00000624988 240 ntBASIC2.41□□□□□ -2.02
TM4SF4P48230 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC2.41□□□□□ -2.02
TM4SF4P48230 ANKRD30BP1-201ENST00000451052 2186 ntBASIC2.41□□□□□ -2.02
TM4SF4P48230 AC005592.1-201ENST00000566527 1640 ntBASIC2.41□□□□□ -2.02
TM4SF4P48230 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
TM4SF4P48230 RNY1P10-201ENST00000363268 113 ntBASIC2.4□□□□□ -2.03
TM4SF4P48230 RNU4-50P-201ENST00000364361 141 ntBASIC2.4□□□□□ -2.03
TM4SF4P48230 MIR1185-2-201ENST00000408687 86 ntBASIC2.4□□□□□ -2.03
TM4SF4P48230 RNA5SP450-201ENST00000411206 102 ntBASIC2.4□□□□□ -2.03
TM4SF4P48230 AL353689.1-201ENST00000438895 199 ntBASIC2.4□□□□□ -2.03
TM4SF4P48230 MTND4P19-201ENST00000446659 478 ntBASIC2.4□□□□□ -2.03
TM4SF4P48230 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.4□□□□□ -2.03
TM4SF4P48230 MIR3169-201ENST00000578032 83 ntBASIC2.4□□□□□ -2.03
TM4SF4P48230 MIR5188-201ENST00000583467 113 ntBASIC2.4□□□□□ -2.03
TM4SF4P48230 AC007485.1-201ENST00000616755 206 ntBASIC2.4□□□□□ -2.03
TM4SF4P48230 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
TM4SF4P48230 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.39□□□□□ -2.03
TM4SF4P48230 RNU6-457P-201ENST00000363999 107 ntBASIC2.39□□□□□ -2.03
TM4SF4P48230 RNU6-1240P-201ENST00000365155 104 ntBASIC2.39□□□□□ -2.03
TM4SF4P48230 SNORD14.1-201ENST00000365609 90 ntBASIC2.39□□□□□ -2.03
TM4SF4P48230 MIR1283-2-201ENST00000408621 87 ntBASIC2.39□□□□□ -2.03
TM4SF4P48230 HMGN2P34-201ENST00000437647 269 ntBASIC2.39□□□□□ -2.03
TM4SF4P48230 AC011406.1-201ENST00000512440 370 ntBASIC2.39□□□□□ -2.03
TM4SF4P48230 RNU6-408P-201ENST00000515910 100 ntBASIC2.39□□□□□ -2.03
TM4SF4P48230 RNU6-1041P-201ENST00000516254 102 ntBASIC2.39□□□□□ -2.03
TM4SF4P48230 Y_RNA.713-201ENST00000517013 96 ntBASIC2.39□□□□□ -2.03
TM4SF4P48230 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC2.39□□□□□ -2.03
TM4SF4P48230 AC004486.1-201ENST00000546846 233 ntBASIC2.39□□□□□ -2.03
TM4SF4P48230 Y_RNA.772-201ENST00000606692 102 ntBASIC2.39□□□□□ -2.03
TM4SF4P48230 MIR6840-201ENST00000611937 71 ntBASIC2.39□□□□□ -2.03
TM4SF4P48230 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC2.39□□□□□ -2.03
TM4SF4P48230 Y_RNA.28-201ENST00000362554 111 ntBASIC2.38□□□□□ -2.03
TM4SF4P48230 MIR489-201ENST00000384923 84 ntBASIC2.38□□□□□ -2.03
TM4SF4P48230 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC2.38□□□□□ -2.03
TM4SF4P48230 RAB28P5-201ENST00000427490 651 ntBASIC2.38□□□□□ -2.03
TM4SF4P48230 AC005840.1-201ENST00000498412 377 ntBASIC2.38□□□□□ -2.03
TM4SF4P48230 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
TM4SF4P48230 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC2.38□□□□□ -2.03
TM4SF4P48230 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.38□□□□□ -2.03
TM4SF4P48230 MIR3683-201ENST00000580847 82 ntBASIC2.38□□□□□ -2.03
TM4SF4P48230 AL359821.1-201ENST00000605519 182 ntBASIC2.38□□□□□ -2.03
TM4SF4P48230 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC2.38□□□□□ -2.03
TM4SF4P48230 CENPF-206ENST00000614578 528 ntTSL 5 BASIC2.38□□□□□ -2.03
TM4SF4P48230 AL357075.2-201ENST00000614906 189 ntBASIC2.38□□□□□ -2.03
TM4SF4P48230 U6.92-201ENST00000636464 89 ntBASIC2.38□□□□□ -2.03
TM4SF4P48230 MIR3674-201ENST00000636576 68 ntBASIC2.38□□□□□ -2.03
TM4SF4P48230 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
TM4SF4P48230 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.38□□□□□ -2.03
TM4SF4P48230 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
TM4SF4P48230 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.37□□□□□ -2.03
TM4SF4P48230 MIR340-201ENST00000362125 95 ntBASIC2.37□□□□□ -2.03
TM4SF4P48230 Y_RNA.80-201ENST00000362996 102 ntBASIC2.37□□□□□ -2.03
TM4SF4P48230 Y_RNA.138-201ENST00000363462 102 ntBASIC2.37□□□□□ -2.03
TM4SF4P48230 Y_RNA.202-201ENST00000364083 110 ntBASIC2.37□□□□□ -2.03
TM4SF4P48230 SNORA25.6-201ENST00000364121 118 ntBASIC2.37□□□□□ -2.03
TM4SF4P48230 RNU4-76P-201ENST00000364509 141 ntBASIC2.37□□□□□ -2.03
TM4SF4P48230 Y_RNA.394-201ENST00000383942 103 ntBASIC2.37□□□□□ -2.03
TM4SF4P48230 Y_RNA.466-201ENST00000384294 113 ntBASIC2.37□□□□□ -2.03
TM4SF4P48230 MIR515-2-201ENST00000384883 83 ntBASIC2.37□□□□□ -2.03
TM4SF4P48230 MIR515-1-201ENST00000384884 83 ntBASIC2.37□□□□□ -2.03
TM4SF4P48230 MIR518E-201ENST00000385252 88 ntBASIC2.37□□□□□ -2.03
TM4SF4P48230 MRPL35P1-201ENST00000404272 572 ntBASIC2.37□□□□□ -2.03
TM4SF4P48230 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.37□□□□□ -2.03
TM4SF4P48230 AC005534.2-201ENST00000431047 433 ntBASIC2.37□□□□□ -2.03
TM4SF4P48230 CHEK2P4-201ENST00000450340 246 ntBASIC2.37□□□□□ -2.03
TM4SF4P48230 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC2.37□□□□□ -2.03
TM4SF4P48230 AC093852.1-201ENST00000503587 266 ntBASIC2.37□□□□□ -2.03
TM4SF4P48230 TRAPPC2P7-201ENST00000509650 231 ntBASIC2.37□□□□□ -2.03
TM4SF4P48230 Y_RNA.721-201ENST00000517207 102 ntBASIC2.37□□□□□ -2.03
TM4SF4P48230 AC040926.1-201ENST00000530195 238 ntBASIC2.37□□□□□ -2.03
TM4SF4P48230 MIR4659A-201ENST00000580269 81 ntBASIC2.37□□□□□ -2.03
TM4SF4P48230 AL356055.1-201ENST00000602528 446 ntBASIC2.37□□□□□ -2.03
TM4SF4P48230 AL109918.3-201ENST00000603072 338 ntBASIC2.37□□□□□ -2.03
TM4SF4P48230 Y_RNA.783-201ENST00000613546 102 ntBASIC2.37□□□□□ -2.03
TM4SF4P48230 DLEU2_2.2-201ENST00000615474 90 ntBASIC2.37□□□□□ -2.03
TM4SF4P48230 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.37□□□□□ -2.03
TM4SF4P48230 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.37□□□□□ -2.03
TM4SF4P48230 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.37□□□□□ -2.03
TM4SF4P48230 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.37□□□□□ -2.03
TM4SF4P48230 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
TM4SF4P48230 Y_RNA.116-201ENST00000363292 103 ntBASIC2.36□□□□□ -2.03
TM4SF4P48230 RNU6-474P-201ENST00000384243 107 ntBASIC2.36□□□□□ -2.03
TM4SF4P48230 RNU6-101P-201ENST00000410323 104 ntBASIC2.36□□□□□ -2.03
TM4SF4P48230 AL139156.1-201ENST00000412785 841 ntBASIC2.36□□□□□ -2.03
TM4SF4P48230 AP1B1P2-201ENST00000416196 106 ntBASIC2.36□□□□□ -2.03
TM4SF4P48230 PMCHL1-202ENST00000423102 261 ntBASIC2.36□□□□□ -2.03
TM4SF4P48230 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.36□□□□□ -2.03
TM4SF4P48230 TRMT112P2-201ENST00000512910 132 ntBASIC2.36□□□□□ -2.03
TM4SF4P48230 RNU6-1012P-201ENST00000516606 109 ntBASIC2.36□□□□□ -2.03
TM4SF4P48230 AC025647.1-201ENST00000517879 253 ntBASIC2.36□□□□□ -2.03
TM4SF4P48230 MIR3171-201ENST00000584270 74 ntBASIC2.36□□□□□ -2.03
TM4SF4P48230 AC069114.2-201ENST00000604699 304 ntBASIC2.36□□□□□ -2.03
TM4SF4P48230 AL121655.1-201ENST00000605811 308 ntBASIC2.36□□□□□ -2.03
TM4SF4P48230 SNORD58B-201ENST00000607313 66 ntBASIC2.36□□□□□ -2.03
TM4SF4P48230 AL353149.1-201ENST00000610667 244 ntBASIC2.36□□□□□ -2.03
TM4SF4P48230 Y_RNA.31-201ENST00000362574 102 ntBASIC2.35□□□□□ -2.03
TM4SF4P48230 snoU2-30.2-201ENST00000362805 70 ntBASIC2.35□□□□□ -2.03
TM4SF4P48230 SNORA25.9-201ENST00000365087 128 ntBASIC2.35□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 125.8 ms