Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 AC093027.1-201ENST00000546698 429 ntBASIC1.7□□□□□ -2.14
NEDD4P46934 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC1.7□□□□□ -2.14
NEDD4P46934 MIR1244-1-201ENST00000612829 85 ntBASIC1.7□□□□□ -2.14
NEDD4P46934 SDR42E1P4-201ENST00000620894 481 ntBASIC1.7□□□□□ -2.14
NEDD4P46934 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.7□□□□□ -2.14
NEDD4P46934 MIR1244-3-201ENST00000635744 85 ntBASIC1.7□□□□□ -2.14
NEDD4P46934 MIR1244-2-201ENST00000636449 85 ntBASIC1.7□□□□□ -2.14
NEDD4P46934 MIR1244-4-202ENST00000636813 85 ntBASIC1.7□□□□□ -2.14
NEDD4P46934 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
NEDD4P46934 AL159152.1-201ENST00000635019 2587 ntBASIC1.7□□□□□ -2.14
NEDD4P46934 MTND5P35-201ENST00000557537 1720 ntBASIC1.7□□□□□ -2.14
NEDD4P46934 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
NEDD4P46934 WWP1P1-201ENST00000466609 2769 ntBASIC1.7□□□□□ -2.14
NEDD4P46934 ZNF702P-202ENST00000434269 1966 ntBASIC1.7□□□□□ -2.14
NEDD4P46934 Y_RNA.315-201ENST00000365117 102 ntBASIC1.69□□□□□ -2.14
NEDD4P46934 RNU6-1145P-201ENST00000384246 107 ntBASIC1.69□□□□□ -2.14
NEDD4P46934 MIR597-201ENST00000384968 97 ntBASIC1.69□□□□□ -2.14
NEDD4P46934 MIR329-1-201ENST00000385028 80 ntBASIC1.69□□□□□ -2.14
NEDD4P46934 MIR559-201ENST00000385188 96 ntBASIC1.69□□□□□ -2.14
NEDD4P46934 SNORA69.1-201ENST00000390904 137 ntBASIC1.69□□□□□ -2.14
NEDD4P46934 RNA5SP212-201ENST00000391223 107 ntBASIC1.69□□□□□ -2.14
NEDD4P46934 AL158823.1-201ENST00000418441 478 ntBASIC1.69□□□□□ -2.14
NEDD4P46934 RPL31P63-201ENST00000422565 375 ntBASIC1.69□□□□□ -2.14
NEDD4P46934 AL445305.1-201ENST00000432577 575 ntBASIC1.69□□□□□ -2.14
NEDD4P46934 AL353689.1-201ENST00000438895 199 ntBASIC1.69□□□□□ -2.14
NEDD4P46934 RNU7-95P-201ENST00000459222 64 ntBASIC1.69□□□□□ -2.14
NEDD4P46934 HMGB3P17-201ENST00000504195 649 ntBASIC1.69□□□□□ -2.14
NEDD4P46934 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC1.69□□□□□ -2.14
NEDD4P46934 RNU1-117P-201ENST00000517041 158 ntBASIC1.69□□□□□ -2.14
NEDD4P46934 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.69□□□□□ -2.14
NEDD4P46934 AC073544.1-201ENST00000600110 1595 ntBASIC1.69□□□□□ -2.14
NEDD4P46934 MIR378A-201ENST00000362177 66 ntBASIC1.68□□□□□ -2.14
NEDD4P46934 Y_RNA.58-201ENST00000362807 102 ntBASIC1.68□□□□□ -2.14
NEDD4P46934 RNU6-727P-201ENST00000363592 107 ntBASIC1.68□□□□□ -2.14
NEDD4P46934 Y_RNA.154-201ENST00000363624 102 ntBASIC1.68□□□□□ -2.14
NEDD4P46934 RNU6-879P-201ENST00000364328 108 ntBASIC1.68□□□□□ -2.14
NEDD4P46934 RNY3P1-201ENST00000365085 102 ntBASIC1.68□□□□□ -2.14
NEDD4P46934 RNY3-201ENST00000365484 102 ntBASIC1.68□□□□□ -2.14
NEDD4P46934 SNORA48.1-201ENST00000390879 135 ntBASIC1.68□□□□□ -2.14
NEDD4P46934 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
NEDD4P46934 BTF3P4-201ENST00000418852 495 ntBASIC1.68□□□□□ -2.14
NEDD4P46934 AF228730.4-201ENST00000421457 183 ntBASIC1.68□□□□□ -2.14
NEDD4P46934 AC096920.1-201ENST00000423991 241 ntBASIC1.68□□□□□ -2.14
NEDD4P46934 MTND4P28-201ENST00000426217 387 ntBASIC1.68□□□□□ -2.14
NEDD4P46934 RPL23AP3-201ENST00000453844 468 ntBASIC1.68□□□□□ -2.14
NEDD4P46934 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.68□□□□□ -2.14
NEDD4P46934 AC074133.1-201ENST00000515696 183 ntBASIC1.68□□□□□ -2.14
NEDD4P46934 RNU6-120P-201ENST00000516077 103 ntBASIC1.68□□□□□ -2.14
NEDD4P46934 RN7SKP49-201ENST00000516675 260 ntBASIC1.68□□□□□ -2.14
NEDD4P46934 AC022868.1-201ENST00000517767 391 ntBASIC1.68□□□□□ -2.14
NEDD4P46934 SUMO2P18-201ENST00000518873 252 ntBASIC1.68□□□□□ -2.14
NEDD4P46934 DNAJC19P9-201ENST00000555084 351 ntBASIC1.68□□□□□ -2.14
NEDD4P46934 C8orf59P2-201ENST00000603441 271 ntBASIC1.68□□□□□ -2.14
NEDD4P46934 MZT1P2-201ENST00000604387 248 ntBASIC1.68□□□□□ -2.14
NEDD4P46934 AC087588.2-201ENST00000617667 426 ntBASIC1.68□□□□□ -2.14
NEDD4P46934 snoZ196.1-201ENST00000625269 89 ntBASIC1.68□□□□□ -2.14
NEDD4P46934 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.68□□□□□ -2.14
NEDD4P46934 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
NEDD4P46934 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.68□□□□□ -2.14
NEDD4P46934 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.67□□□□□ -2.14
NEDD4P46934 Y_RNA.415-201ENST00000384012 112 ntBASIC1.67□□□□□ -2.14
NEDD4P46934 Y_RNA.428-201ENST00000384078 102 ntBASIC1.67□□□□□ -2.14
NEDD4P46934 MIR548B-201ENST00000385247 97 ntBASIC1.67□□□□□ -2.14
NEDD4P46934 MIR1185-2-201ENST00000408687 86 ntBASIC1.67□□□□□ -2.14
NEDD4P46934 Y_RNA.592-201ENST00000410274 109 ntBASIC1.67□□□□□ -2.14
NEDD4P46934 Y_RNA.605-201ENST00000410577 105 ntBASIC1.67□□□□□ -2.14
NEDD4P46934 AC008134.1-201ENST00000420943 193 ntBASIC1.67□□□□□ -2.14
NEDD4P46934 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.67□□□□□ -2.14
NEDD4P46934 AC016717.1-201ENST00000448918 286 ntBASIC1.67□□□□□ -2.14
NEDD4P46934 RNU6-221P-201ENST00000459541 99 ntBASIC1.67□□□□□ -2.14
NEDD4P46934 MIR4287-201ENST00000579398 78 ntBASIC1.67□□□□□ -2.14
NEDD4P46934 AC125232.2-201ENST00000592457 143 ntBASIC1.67□□□□□ -2.14
NEDD4P46934 AC005034.5-201ENST00000604219 466 ntBASIC1.67□□□□□ -2.14
NEDD4P46934 AC083806.3-201ENST00000614016 455 ntBASIC1.67□□□□□ -2.14
NEDD4P46934 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.67□□□□□ -2.14
NEDD4P46934 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.67□□□□□ -2.14
NEDD4P46934 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.67□□□□□ -2.14
NEDD4P46934 SNORD87-201ENST00000364849 89 ntBASIC1.66□□□□□ -2.14
NEDD4P46934 Y_RNA.463-201ENST00000384271 102 ntBASIC1.66□□□□□ -2.14
NEDD4P46934 MIR676-201ENST00000390702 67 ntBASIC1.66□□□□□ -2.14
NEDD4P46934 RNA5SP501-201ENST00000410990 112 ntBASIC1.66□□□□□ -2.14
NEDD4P46934 RNU6-1001P-201ENST00000411265 100 ntBASIC1.66□□□□□ -2.14
NEDD4P46934 AP1B1P2-201ENST00000416196 106 ntBASIC1.66□□□□□ -2.14
NEDD4P46934 ATP5J2P3-201ENST00000451550 258 ntBASIC1.66□□□□□ -2.14
NEDD4P46934 PCNPP5-201ENST00000452246 481 ntBASIC1.66□□□□□ -2.14
NEDD4P46934 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.66□□□□□ -2.14
NEDD4P46934 AC023790.1-201ENST00000482174 347 ntBASIC1.66□□□□□ -2.14
NEDD4P46934 AC011406.1-201ENST00000512440 370 ntBASIC1.66□□□□□ -2.14
NEDD4P46934 RNU6-1170P-201ENST00000515974 106 ntBASIC1.66□□□□□ -2.14
NEDD4P46934 RNU6-976P-201ENST00000516086 111 ntBASIC1.66□□□□□ -2.14
NEDD4P46934 RNU6-1146P-201ENST00000516282 102 ntBASIC1.66□□□□□ -2.14
NEDD4P46934 RNU6-911P-201ENST00000516523 104 ntBASIC1.66□□□□□ -2.14
NEDD4P46934 RNU6-699P-201ENST00000517081 110 ntBASIC1.66□□□□□ -2.14
NEDD4P46934 SNORD116.3-201ENST00000517176 78 ntBASIC1.66□□□□□ -2.14
NEDD4P46934 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.66□□□□□ -2.14
NEDD4P46934 AL161670.1-201ENST00000554348 137 ntBASIC1.66□□□□□ -2.14
NEDD4P46934 AL109918.3-201ENST00000603072 338 ntBASIC1.66□□□□□ -2.14
NEDD4P46934 AL133255.1-201ENST00000606374 441 ntBASIC1.66□□□□□ -2.14
NEDD4P46934 AL353149.1-201ENST00000610667 244 ntBASIC1.66□□□□□ -2.14
NEDD4P46934 AL773524.1-201ENST00000614065 229 ntBASIC1.66□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 240.6 ms