Protein–RNA interactions for Protein: P46779

RPL28, 60S ribosomal protein L28, humanhuman

Known RBP Predictions only

Length 137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28P46779 MTCO1P19-201ENST00000443487 500 ntBASIC0.25□□□□□ -2.37
RPL28P46779 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC0.25□□□□□ -2.37
RPL28P46779 AP000870.1-201ENST00000472927 406 ntBASIC0.25□□□□□ -2.37
RPL28P46779 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC0.25□□□□□ -2.37
RPL28P46779 AC097462.1-201ENST00000514125 324 ntBASIC0.25□□□□□ -2.37
RPL28P46779 AC023157.2-201ENST00000540596 141 ntBASIC0.25□□□□□ -2.37
RPL28P46779 7SK.7-201ENST00000603504 247 ntBASIC0.25□□□□□ -2.37
RPL28P46779 AC005592.1-201ENST00000566527 1640 ntBASIC0.24□□□□□ -2.37
RPL28P46779 MTND4P12-201ENST00000498999 1377 ntBASIC0.24□□□□□ -2.37
RPL28P46779 AC134026.1-201ENST00000623249 2239 ntBASIC0.24□□□□□ -2.37
RPL28P46779 SNORD115-32-201ENST00000364079 82 ntBASIC0.24□□□□□ -2.37
RPL28P46779 RNU1-133P-201ENST00000364867 167 ntBASIC0.24□□□□□ -2.37
RPL28P46779 Y_RNA.330-201ENST00000365230 109 ntBASIC0.24□□□□□ -2.37
RPL28P46779 Y_RNA.415-201ENST00000384012 112 ntBASIC0.24□□□□□ -2.37
RPL28P46779 RNU5A-2P-201ENST00000384337 116 ntBASIC0.24□□□□□ -2.37
RPL28P46779 MIR562-201ENST00000384894 95 ntBASIC0.24□□□□□ -2.37
RPL28P46779 MIR521-1-201ENST00000384902 87 ntBASIC0.24□□□□□ -2.37
RPL28P46779 MIR1287-201ENST00000408492 90 ntBASIC0.24□□□□□ -2.37
RPL28P46779 MTCO3P19-201ENST00000415864 321 ntBASIC0.24□□□□□ -2.37
RPL28P46779 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC0.24□□□□□ -2.37
RPL28P46779 MTND4P18-201ENST00000447010 465 ntBASIC0.24□□□□□ -2.37
RPL28P46779 TPTE2P5-203ENST00000458118 728 ntBASIC0.24□□□□□ -2.37
RPL28P46779 AC092436.3-201ENST00000511788 257 ntBASIC0.24□□□□□ -2.37
RPL28P46779 SNORA25.14-201ENST00000516481 132 ntBASIC0.24□□□□□ -2.37
RPL28P46779 RNU2-56P-201ENST00000516826 190 ntBASIC0.24□□□□□ -2.37
RPL28P46779 RNU6-1198P-201ENST00000516904 67 ntBASIC0.24□□□□□ -2.37
RPL28P46779 RNU6-341P-201ENST00000516973 96 ntBASIC0.24□□□□□ -2.37
RPL28P46779 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC0.24□□□□□ -2.37
RPL28P46779 AC027288.2-201ENST00000553028 243 ntBASIC0.24□□□□□ -2.37
RPL28P46779 AC023827.1-201ENST00000569247 97 ntBASIC0.24□□□□□ -2.37
RPL28P46779 MIR3913-1-201ENST00000577744 102 ntBASIC0.24□□□□□ -2.37
RPL28P46779 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC0.24□□□□□ -2.37
RPL28P46779 AC091178.2-201ENST00000584401 117 ntBASIC0.24□□□□□ -2.37
RPL28P46779 MIR5692C1-201ENST00000585309 91 ntBASIC0.24□□□□□ -2.37
RPL28P46779 AC087683.1-201ENST00000591187 441 ntBASIC0.24□□□□□ -2.37
RPL28P46779 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC0.24□□□□□ -2.37
RPL28P46779 Z83818.1-201ENST00000603584 150 ntBASIC0.24□□□□□ -2.37
RPL28P46779 AC243829.6-201ENST00000612652 106 ntBASIC0.24□□□□□ -2.37
RPL28P46779 AC007014.2-201ENST00000615581 479 ntBASIC0.24□□□□□ -2.37
RPL28P46779 AC072046.2-201ENST00000618366 268 ntBASIC0.24□□□□□ -2.37
RPL28P46779 7SK.10-201ENST00000621414 298 ntBASIC0.24□□□□□ -2.37
RPL28P46779 SNORA1B-201ENST00000362535 133 ntBASIC0.23□□□□□ -2.37
RPL28P46779 Y_RNA.201-201ENST00000364052 96 ntBASIC0.23□□□□□ -2.37
RPL28P46779 Y_RNA.336-201ENST00000365307 109 ntBASIC0.23□□□□□ -2.37
RPL28P46779 RNY3P9-201ENST00000384727 106 ntBASIC0.23□□□□□ -2.37
RPL28P46779 RNU6-1067P-201ENST00000384752 107 ntBASIC0.23□□□□□ -2.37
RPL28P46779 RNY3P10-201ENST00000384764 102 ntBASIC0.23□□□□□ -2.37
RPL28P46779 RNA5SP482-201ENST00000391269 118 ntBASIC0.23□□□□□ -2.37
RPL28P46779 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC0.23□□□□□ -2.37
RPL28P46779 MTND2P18-201ENST00000419962 1030 ntBASIC0.23□□□□□ -2.37
RPL28P46779 NDUFA5P4-201ENST00000436704 385 ntBASIC0.23□□□□□ -2.37
RPL28P46779 DAP3P1-201ENST00000441522 278 ntBASIC0.23□□□□□ -2.37
RPL28P46779 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC0.23□□□□□ -2.37
RPL28P46779 AC010469.2-201ENST00000496412 480 ntBASIC0.23□□□□□ -2.37
RPL28P46779 MTCO1P29-201ENST00000496868 288 ntBASIC0.23□□□□□ -2.37
RPL28P46779 RNU4-57P-201ENST00000515980 135 ntBASIC0.23□□□□□ -2.37
RPL28P46779 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC0.23□□□□□ -2.37
RPL28P46779 AP001372.4-201ENST00000524889 472 ntBASIC0.23□□□□□ -2.37
RPL28P46779 AP002004.2-201ENST00000531656 154 ntBASIC0.23□□□□□ -2.37
RPL28P46779 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC0.23□□□□□ -2.37
RPL28P46779 MIR3915-201ENST00000578518 97 ntBASIC0.23□□□□□ -2.37
RPL28P46779 AL357078.3-201ENST00000607528 618 ntBASIC0.23□□□□□ -2.37
RPL28P46779 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC0.23□□□□□ -2.37
RPL28P46779 MTND5P16-201ENST00000460269 1703 ntBASIC0.23□□□□□ -2.37
RPL28P46779 SNORD50.1-201ENST00000362987 71 ntBASIC0.22□□□□□ -2.37
RPL28P46779 MIR1185-1-201ENST00000408598 86 ntBASIC0.22□□□□□ -2.37
RPL28P46779 MTCO2P12-201ENST00000427426 682 ntBASIC0.22□□□□□ -2.37
RPL28P46779 AL358934.1-201ENST00000432346 324 ntBASIC0.22□□□□□ -2.37
RPL28P46779 MTCO2P16-201ENST00000436962 677 ntBASIC0.22□□□□□ -2.37
RPL28P46779 AL031667.1-201ENST00000440222 725 ntBASIC0.22□□□□□ -2.37
RPL28P46779 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.22□□□□□ -2.37
RPL28P46779 AC079354.2-201ENST00000453523 154 ntBASIC0.22□□□□□ -2.37
RPL28P46779 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC0.22□□□□□ -2.37
RPL28P46779 HMGN2P26-201ENST00000463169 339 ntBASIC0.22□□□□□ -2.37
RPL28P46779 AC091021.1-201ENST00000468051 388 ntBASIC0.22□□□□□ -2.37
RPL28P46779 AC091179.3-201ENST00000474761 144 ntBASIC0.22□□□□□ -2.37
RPL28P46779 AC010598.1-201ENST00000510378 103 ntBASIC0.22□□□□□ -2.37
RPL28P46779 RNU6-496P-201ENST00000516145 99 ntBASIC0.22□□□□□ -2.37
RPL28P46779 RNU7-172P-201ENST00000517125 64 ntBASIC0.22□□□□□ -2.37
RPL28P46779 AC060788.1-201ENST00000521318 469 ntBASIC0.22□□□□□ -2.37
RPL28P46779 AC016957.1-201ENST00000534895 309 ntBASIC0.22□□□□□ -2.37
RPL28P46779 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.22□□□□□ -2.37
RPL28P46779 AC092747.3-201ENST00000603769 301 ntBASIC0.22□□□□□ -2.37
RPL28P46779 AL158209.2-201ENST00000619266 216 ntBASIC0.22□□□□□ -2.37
RPL28P46779 AC068137.4-201ENST00000638485 296 ntBASIC0.22□□□□□ -2.37
RPL28P46779 MIR103A2-201ENST00000362154 78 ntBASIC0.21□□□□□ -2.38
RPL28P46779 RNU6-833P-201ENST00000363486 107 ntBASIC0.21□□□□□ -2.38
RPL28P46779 RNU6-727P-201ENST00000363592 107 ntBASIC0.21□□□□□ -2.38
RPL28P46779 RNU6-873P-201ENST00000363833 107 ntBASIC0.21□□□□□ -2.38
RPL28P46779 RNA5SP499-201ENST00000363982 119 ntBASIC0.21□□□□□ -2.38
RPL28P46779 Y_RNA.226-201ENST00000364337 114 ntBASIC0.21□□□□□ -2.38
RPL28P46779 Y_RNA.319-201ENST00000365138 92 ntBASIC0.21□□□□□ -2.38
RPL28P46779 MIR32-201ENST00000384965 70 ntBASIC0.21□□□□□ -2.38
RPL28P46779 MIR518E-201ENST00000385252 88 ntBASIC0.21□□□□□ -2.38
RPL28P46779 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC0.21□□□□□ -2.38
RPL28P46779 MRPS18CP6-201ENST00000423587 223 ntBASIC0.21□□□□□ -2.38
RPL28P46779 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC0.21□□□□□ -2.38
RPL28P46779 AC098934.3-201ENST00000430450 190 ntBASIC0.21□□□□□ -2.38
RPL28P46779 SNORA68.3-201ENST00000515906 83 ntBASIC0.21□□□□□ -2.38
RPL28P46779 AL118558.2-201ENST00000556294 238 ntBASIC0.21□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 114.2 ms