Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 Y_RNA.145-201ENST00000363527 102 ntBASIC1.89□□□□□ -2.11
HNF4AP41235 Y_RNA.153-201ENST00000363615 91 ntBASIC1.89□□□□□ -2.11
HNF4AP41235 RNU6-438P-201ENST00000365561 103 ntBASIC1.89□□□□□ -2.11
HNF4AP41235 Y_RNA.455-201ENST00000384230 98 ntBASIC1.89□□□□□ -2.11
HNF4AP41235 MIR628-201ENST00000385229 95 ntBASIC1.89□□□□□ -2.11
HNF4AP41235 SUMO2P12-201ENST00000405924 140 ntBASIC1.89□□□□□ -2.11
HNF4AP41235 RNU2-2P-201ENST00000410396 191 ntBASIC1.89□□□□□ -2.11
HNF4AP41235 RNA5SP100-201ENST00000410903 110 ntBASIC1.89□□□□□ -2.11
HNF4AP41235 RNA5SP59-201ENST00000410922 110 ntBASIC1.89□□□□□ -2.11
HNF4AP41235 RNU6-1001P-201ENST00000411265 100 ntBASIC1.89□□□□□ -2.11
HNF4AP41235 MTCO3P19-201ENST00000415864 321 ntBASIC1.89□□□□□ -2.11
HNF4AP41235 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
HNF4AP41235 AC004386.2-201ENST00000441858 148 ntBASIC1.89□□□□□ -2.11
HNF4AP41235 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.89□□□□□ -2.11
HNF4AP41235 AC093852.1-201ENST00000503587 266 ntBASIC1.89□□□□□ -2.11
HNF4AP41235 RNU6-764P-201ENST00000516396 105 ntBASIC1.89□□□□□ -2.11
HNF4AP41235 RNU6-1046P-201ENST00000516538 107 ntBASIC1.89□□□□□ -2.11
HNF4AP41235 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.89□□□□□ -2.11
HNF4AP41235 MIR2355-201ENST00000517199 87 ntBASIC1.89□□□□□ -2.11
HNF4AP41235 AC093023.1-201ENST00000547375 507 ntBASIC1.89□□□□□ -2.11
HNF4AP41235 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.89□□□□□ -2.11
HNF4AP41235 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.89□□□□□ -2.11
HNF4AP41235 MZT1P2-201ENST00000604387 248 ntBASIC1.89□□□□□ -2.11
HNF4AP41235 AC010900.2-201ENST00000604508 210 ntBASIC1.89□□□□□ -2.11
HNF4AP41235 U2.15-201ENST00000611544 191 ntBASIC1.89□□□□□ -2.11
HNF4AP41235 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.89□□□□□ -2.11
HNF4AP41235 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.89□□□□□ -2.11
HNF4AP41235 U2.16-201ENST00000613119 191 ntBASIC1.89□□□□□ -2.11
HNF4AP41235 U2.12-201ENST00000613778 191 ntBASIC1.89□□□□□ -2.11
HNF4AP41235 U2.20-201ENST00000613956 192 ntBASIC1.89□□□□□ -2.11
HNF4AP41235 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.89□□□□□ -2.11
HNF4AP41235 U2.9-201ENST00000615427 191 ntBASIC1.89□□□□□ -2.11
HNF4AP41235 U2.11-201ENST00000616345 191 ntBASIC1.89□□□□□ -2.11
HNF4AP41235 U2.2-201ENST00000616535 191 ntBASIC1.89□□□□□ -2.11
HNF4AP41235 U2.3-201ENST00000617785 191 ntBASIC1.89□□□□□ -2.11
HNF4AP41235 AL138825.1-201ENST00000618587 192 ntBASIC1.89□□□□□ -2.11
HNF4AP41235 U2.19-201ENST00000618602 191 ntBASIC1.89□□□□□ -2.11
HNF4AP41235 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.89□□□□□ -2.11
HNF4AP41235 RNU2-1-201ENST00000618664 191 ntBASIC1.89□□□□□ -2.11
HNF4AP41235 U2.6-201ENST00000619225 191 ntBASIC1.89□□□□□ -2.11
HNF4AP41235 U2.5-201ENST00000619465 191 ntBASIC1.89□□□□□ -2.11
HNF4AP41235 U2.10-201ENST00000620268 191 ntBASIC1.89□□□□□ -2.11
HNF4AP41235 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.89□□□□□ -2.11
HNF4AP41235 AL078596.1-201ENST00000624856 447 ntBASIC1.89□□□□□ -2.11
HNF4AP41235 Y_RNA.27-201ENST00000362540 103 ntBASIC1.88□□□□□ -2.11
HNF4AP41235 RNU6-280P-201ENST00000364145 104 ntBASIC1.88□□□□□ -2.11
HNF4AP41235 SNORD114-6-201ENST00000364393 72 ntBASIC1.88□□□□□ -2.11
HNF4AP41235 RNU6-1145P-201ENST00000384246 107 ntBASIC1.88□□□□□ -2.11
HNF4AP41235 RNY3P4-201ENST00000384428 101 ntBASIC1.88□□□□□ -2.11
HNF4AP41235 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
HNF4AP41235 RNU6-101P-201ENST00000410323 104 ntBASIC1.88□□□□□ -2.11
HNF4AP41235 OOSP1P1-201ENST00000423265 274 ntBASIC1.88□□□□□ -2.11
HNF4AP41235 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.88□□□□□ -2.11
HNF4AP41235 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC1.88□□□□□ -2.11
HNF4AP41235 HMGN1P10-201ENST00000474557 553 ntBASIC1.88□□□□□ -2.11
HNF4AP41235 RN7SL429P-201ENST00000479090 223 ntBASIC1.88□□□□□ -2.11
HNF4AP41235 RN7SL489P-201ENST00000486185 223 ntBASIC1.88□□□□□ -2.11
HNF4AP41235 RN7SL327P-201ENST00000488659 223 ntBASIC1.88□□□□□ -2.11
HNF4AP41235 RNU6-1045P-201ENST00000516321 107 ntBASIC1.88□□□□□ -2.11
HNF4AP41235 RNU6-1098P-201ENST00000516772 96 ntBASIC1.88□□□□□ -2.11
HNF4AP41235 Y_RNA.720-201ENST00000517166 92 ntBASIC1.88□□□□□ -2.11
HNF4AP41235 AC022616.4-201ENST00000522985 181 ntBASIC1.88□□□□□ -2.11
HNF4AP41235 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC1.88□□□□□ -2.11
HNF4AP41235 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.88□□□□□ -2.11
HNF4AP41235 SNRPGP20-201ENST00000604477 205 ntBASIC1.88□□□□□ -2.11
HNF4AP41235 AC012493.3-201ENST00000604494 112 ntBASIC1.88□□□□□ -2.11
HNF4AP41235 RPL17P51-201ENST00000605218 238 ntBASIC1.88□□□□□ -2.11
HNF4AP41235 AL357075.2-201ENST00000614906 189 ntBASIC1.88□□□□□ -2.11
HNF4AP41235 TCL6_2.1-201ENST00000615162 119 ntBASIC1.88□□□□□ -2.11
HNF4AP41235 DLEU2_2.2-201ENST00000615474 90 ntBASIC1.88□□□□□ -2.11
HNF4AP41235 RN7SL853P-201ENST00000617250 223 ntBASIC1.88□□□□□ -2.11
HNF4AP41235 AC005562.2-201ENST00000618264 111 ntBASIC1.88□□□□□ -2.11
HNF4AP41235 U6.92-201ENST00000636464 89 ntBASIC1.88□□□□□ -2.11
HNF4AP41235 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.88□□□□□ -2.11
HNF4AP41235 RNU6-245P-201ENST00000384020 107 ntBASIC1.87□□□□□ -2.11
HNF4AP41235 Y_RNA.458-201ENST00000384240 102 ntBASIC1.87□□□□□ -2.11
HNF4AP41235 MIR30A-201ENST00000385092 71 ntBASIC1.87□□□□□ -2.11
HNF4AP41235 AC091179.3-201ENST00000474761 144 ntBASIC1.87□□□□□ -2.11
HNF4AP41235 YWHAEP4-201ENST00000505390 198 ntBASIC1.87□□□□□ -2.11
HNF4AP41235 RNU6-1012P-201ENST00000516606 109 ntBASIC1.87□□□□□ -2.11
HNF4AP41235 Y_RNA.721-201ENST00000517207 102 ntBASIC1.87□□□□□ -2.11
HNF4AP41235 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.87□□□□□ -2.11
HNF4AP41235 AC091144.1-201ENST00000519573 138 ntBASIC1.87□□□□□ -2.11
HNF4AP41235 MIR5006-201ENST00000583027 110 ntBASIC1.87□□□□□ -2.11
HNF4AP41235 AC136443.5-201ENST00000603741 370 ntBASIC1.87□□□□□ -2.11
HNF4AP41235 AL021879.1-201ENST00000611756 288 ntBASIC1.87□□□□□ -2.11
HNF4AP41235 AC010999.1-201ENST00000611856 324 ntBASIC1.87□□□□□ -2.11
HNF4AP41235 RNU6-661P-201ENST00000362409 107 ntBASIC1.86□□□□□ -2.11
HNF4AP41235 RNU6-727P-201ENST00000363592 107 ntBASIC1.86□□□□□ -2.11
HNF4AP41235 Y_RNA.179-201ENST00000363844 90 ntBASIC1.86□□□□□ -2.11
HNF4AP41235 RNU6-926P-201ENST00000384075 107 ntBASIC1.86□□□□□ -2.11
HNF4AP41235 Y_RNA.459-201ENST00000384251 102 ntBASIC1.86□□□□□ -2.11
HNF4AP41235 snosnR66.1-201ENST00000391095 99 ntBASIC1.86□□□□□ -2.11
HNF4AP41235 MIR934-201ENST00000401241 83 ntBASIC1.86□□□□□ -2.11
HNF4AP41235 AL079342.1-201ENST00000401460 267 ntBASIC1.86□□□□□ -2.11
HNF4AP41235 MIR1252-201ENST00000408861 65 ntBASIC1.86□□□□□ -2.11
HNF4AP41235 SNORD12B-201ENST00000410433 91 ntBASIC1.86□□□□□ -2.11
HNF4AP41235 RNU6-130P-201ENST00000411112 103 ntBASIC1.86□□□□□ -2.11
HNF4AP41235 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC1.86□□□□□ -2.11
HNF4AP41235 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.86□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 142.5 ms