Protein–RNA interactions for Protein: P40818

USP8, Ubiquitin carboxyl-terminal hydrolase 8, humanhuman

Predictions only

Length 1,118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP8P40818 RNU6-238P-201ENST00000363313 106 ntBASIC2.1□□□□□ -2.07
USP8P40818 Y_RNA.526-201ENST00000384572 110 ntBASIC2.1□□□□□ -2.07
USP8P40818 RNU6-1105P-201ENST00000384774 107 ntBASIC2.1□□□□□ -2.07
USP8P40818 MIR548F4-201ENST00000408515 105 ntBASIC2.1□□□□□ -2.07
USP8P40818 Y_RNA.595-201ENST00000410403 105 ntBASIC2.1□□□□□ -2.07
USP8P40818 ELOCP20-201ENST00000422460 345 ntBASIC2.1□□□□□ -2.07
USP8P40818 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.1□□□□□ -2.07
USP8P40818 FCF1P4-201ENST00000448326 183 ntBASIC2.1□□□□□ -2.07
USP8P40818 RPL26P26-201ENST00000480251 434 ntBASIC2.1□□□□□ -2.07
USP8P40818 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.1□□□□□ -2.07
USP8P40818 SNORA4.4-201ENST00000515921 135 ntBASIC2.1□□□□□ -2.07
USP8P40818 RNU6-107P-201ENST00000516643 102 ntBASIC2.1□□□□□ -2.07
USP8P40818 RNU6-635P-201ENST00000516651 102 ntBASIC2.1□□□□□ -2.07
USP8P40818 RNU6-897P-201ENST00000517135 105 ntBASIC2.1□□□□□ -2.07
USP8P40818 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.1□□□□□ -2.07
USP8P40818 AC008269.2-201ENST00000561915 1105 ntBASIC2.1□□□□□ -2.07
USP8P40818 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.1□□□□□ -2.07
USP8P40818 AL109918.3-201ENST00000603072 338 ntBASIC2.1□□□□□ -2.07
USP8P40818 AL355297.3-201ENST00000604082 446 ntBASIC2.1□□□□□ -2.07
USP8P40818 SNORD11B-201ENST00000607707 90 ntBASIC2.1□□□□□ -2.07
USP8P40818 U4atac.1-201ENST00000618345 95 ntBASIC2.1□□□□□ -2.07
USP8P40818 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.1□□□□□ -2.07
USP8P40818 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.09□□□□□ -2.07
USP8P40818 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.09□□□□□ -2.07
USP8P40818 RNU1-62P-201ENST00000362599 164 ntBASIC2.09□□□□□ -2.07
USP8P40818 Y_RNA.143-201ENST00000363520 106 ntBASIC2.09□□□□□ -2.07
USP8P40818 RNU6-1305P-201ENST00000364353 104 ntBASIC2.09□□□□□ -2.07
USP8P40818 SNORA25B-201ENST00000365507 128 ntBASIC2.09□□□□□ -2.07
USP8P40818 RNU6-1026P-201ENST00000384465 108 ntBASIC2.09□□□□□ -2.07
USP8P40818 Y_RNA.551-201ENST00000384661 102 ntBASIC2.09□□□□□ -2.07
USP8P40818 AL512604.1-201ENST00000404812 257 ntBASIC2.09□□□□□ -2.07
USP8P40818 ELOCP21-201ENST00000412558 336 ntBASIC2.09□□□□□ -2.07
USP8P40818 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.09□□□□□ -2.07
USP8P40818 AL358176.2-201ENST00000425769 204 ntBASIC2.09□□□□□ -2.07
USP8P40818 AC007395.1-201ENST00000451333 677 ntBASIC2.09□□□□□ -2.07
USP8P40818 RNU6-625P-201ENST00000459412 107 ntBASIC2.09□□□□□ -2.07
USP8P40818 RNU6-344P-201ENST00000516635 111 ntBASIC2.09□□□□□ -2.07
USP8P40818 RNA5SP490-201ENST00000517141 136 ntBASIC2.09□□□□□ -2.07
USP8P40818 AP002001.1-203ENST00000534002 267 ntBASIC2.09□□□□□ -2.07
USP8P40818 AC055872.1-201ENST00000570978 278 ntBASIC2.09□□□□□ -2.07
USP8P40818 MIR4648-201ENST00000580107 72 ntBASIC2.09□□□□□ -2.07
USP8P40818 AL162730.1-201ENST00000605734 292 ntBASIC2.09□□□□□ -2.07
USP8P40818 AL121655.1-201ENST00000605811 308 ntBASIC2.09□□□□□ -2.07
USP8P40818 AC022202.1-201ENST00000613515 211 ntBASIC2.09□□□□□ -2.07
USP8P40818 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.09□□□□□ -2.07
USP8P40818 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
USP8P40818 Y_RNA.380-201ENST00000365663 111 ntBASIC2.08□□□□□ -2.08
USP8P40818 SNORA67.2-201ENST00000384300 149 ntBASIC2.08□□□□□ -2.08
USP8P40818 RNU6-937P-201ENST00000384325 106 ntBASIC2.08□□□□□ -2.08
USP8P40818 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
USP8P40818 RNU2-2P-201ENST00000410396 191 ntBASIC2.08□□□□□ -2.08
USP8P40818 RNU6-121P-201ENST00000410525 99 ntBASIC2.08□□□□□ -2.08
USP8P40818 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC2.08□□□□□ -2.08
USP8P40818 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
USP8P40818 HMGN2P18-201ENST00000450680 270 ntBASIC2.08□□□□□ -2.08
USP8P40818 PCNPP5-201ENST00000452246 481 ntBASIC2.08□□□□□ -2.08
USP8P40818 HMGN2P9-201ENST00000476875 229 ntBASIC2.08□□□□□ -2.08
USP8P40818 RNY3P15-201ENST00000516297 97 ntBASIC2.08□□□□□ -2.08
USP8P40818 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC2.08□□□□□ -2.08
USP8P40818 AC018448.1-201ENST00000552843 316 ntBASIC2.08□□□□□ -2.08
USP8P40818 AL117187.1-201ENST00000555482 181 ntBASIC2.08□□□□□ -2.08
USP8P40818 AC136932.1-201ENST00000574771 208 ntBASIC2.08□□□□□ -2.08
USP8P40818 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC2.08□□□□□ -2.08
USP8P40818 U2.15-201ENST00000611544 191 ntBASIC2.08□□□□□ -2.08
USP8P40818 U2.16-201ENST00000613119 191 ntBASIC2.08□□□□□ -2.08
USP8P40818 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC2.08□□□□□ -2.08
USP8P40818 U2.12-201ENST00000613778 191 ntBASIC2.08□□□□□ -2.08
USP8P40818 U2.20-201ENST00000613956 192 ntBASIC2.08□□□□□ -2.08
USP8P40818 U2.9-201ENST00000615427 191 ntBASIC2.08□□□□□ -2.08
USP8P40818 U2.11-201ENST00000616345 191 ntBASIC2.08□□□□□ -2.08
USP8P40818 U2.2-201ENST00000616535 191 ntBASIC2.08□□□□□ -2.08
USP8P40818 U2.3-201ENST00000617785 191 ntBASIC2.08□□□□□ -2.08
USP8P40818 U2.19-201ENST00000618602 191 ntBASIC2.08□□□□□ -2.08
USP8P40818 RNU2-1-201ENST00000618664 191 ntBASIC2.08□□□□□ -2.08
USP8P40818 U2.6-201ENST00000619225 191 ntBASIC2.08□□□□□ -2.08
USP8P40818 U2.5-201ENST00000619465 191 ntBASIC2.08□□□□□ -2.08
USP8P40818 U2.10-201ENST00000620268 191 ntBASIC2.08□□□□□ -2.08
USP8P40818 AC068205.3-201ENST00000636385 468 ntBASIC2.08□□□□□ -2.08
USP8P40818 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.08□□□□□ -2.08
USP8P40818 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
USP8P40818 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
USP8P40818 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.07□□□□□ -2.08
USP8P40818 RNU5F-3P-201ENST00000363767 117 ntBASIC2.07□□□□□ -2.08
USP8P40818 Y_RNA.214-201ENST00000364201 112 ntBASIC2.07□□□□□ -2.08
USP8P40818 Y_RNA.439-201ENST00000384119 94 ntBASIC2.07□□□□□ -2.08
USP8P40818 RNU6-574P-201ENST00000384265 107 ntBASIC2.07□□□□□ -2.08
USP8P40818 MIR561-201ENST00000385216 97 ntBASIC2.07□□□□□ -2.08
USP8P40818 RPL21P1-201ENST00000399532 476 ntBASIC2.07□□□□□ -2.08
USP8P40818 RPL21P38-201ENST00000418090 167 ntBASIC2.07□□□□□ -2.08
USP8P40818 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC2.07□□□□□ -2.08
USP8P40818 RAB28P5-201ENST00000427490 651 ntBASIC2.07□□□□□ -2.08
USP8P40818 AC009238.1-201ENST00000442165 424 ntBASIC2.07□□□□□ -2.08
USP8P40818 AC009237.6-201ENST00000446969 424 ntBASIC2.07□□□□□ -2.08
USP8P40818 AC016717.1-201ENST00000448918 286 ntBASIC2.07□□□□□ -2.08
USP8P40818 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC2.07□□□□□ -2.08
USP8P40818 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.07□□□□□ -2.08
USP8P40818 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
USP8P40818 Y_RNA.64-201ENST00000362845 102 ntBASIC2.06□□□□□ -2.08
USP8P40818 Y_RNA.133-201ENST00000363428 110 ntBASIC2.06□□□□□ -2.08
USP8P40818 Y_RNA.222-201ENST00000364264 102 ntBASIC2.06□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 113.6 ms