Protein–RNA interactions for Protein: P31431

SDC4, Syndecan-4, humanhuman

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4P31431 AC079781.2-201ENST00000446424 169 ntBASIC-0.36□□□□□ -2.47
SDC4P31431 AC007215.1-201ENST00000464893 276 ntBASIC-0.36□□□□□ -2.47
SDC4P31431 AC025449.1-201ENST00000603896 529 ntBASIC-0.36□□□□□ -2.47
SDC4P31431 MIR8076-201ENST00000611401 83 ntBASIC-0.36□□□□□ -2.47
SDC4P31431 AC009159.2-201ENST00000617603 606 ntBASIC-0.36□□□□□ -2.47
SDC4P31431 uc_338.16-201ENST00000621804 95 ntBASIC-0.36□□□□□ -2.47
SDC4P31431 SNORA9.1-201ENST00000362412 131 ntBASIC-0.37□□□□□ -2.47
SDC4P31431 SNORA36.1-201ENST00000363424 132 ntBASIC-0.37□□□□□ -2.47
SDC4P31431 RNU6-1099P-201ENST00000363533 107 ntBASIC-0.37□□□□□ -2.47
SDC4P31431 MIR450B-201ENST00000401182 78 ntBASIC-0.37□□□□□ -2.47
SDC4P31431 AL355143.1-201ENST00000407101 841 ntBASIC-0.37□□□□□ -2.47
SDC4P31431 MIR1298-201ENST00000408783 112 ntBASIC-0.37□□□□□ -2.47
SDC4P31431 RNU6-613P-201ENST00000410412 108 ntBASIC-0.37□□□□□ -2.47
SDC4P31431 BTBD7P2-201ENST00000441962 620 ntBASIC-0.37□□□□□ -2.47
SDC4P31431 MRPS10P1-201ENST00000448483 130 ntBASIC-0.37□□□□□ -2.47
SDC4P31431 SNORD65B-201ENST00000459126 73 ntBASIC-0.37□□□□□ -2.47
SDC4P31431 RPS29P27-201ENST00000463711 170 ntBASIC-0.37□□□□□ -2.47
SDC4P31431 MTND4LP18-201ENST00000526864 291 ntBASIC-0.37□□□□□ -2.47
SDC4P31431 MIR4804-201ENST00000581683 73 ntBASIC-0.37□□□□□ -2.47
SDC4P31431 RNU6-1287P-201ENST00000362914 107 ntBASIC-0.38□□□□□ -2.47
SDC4P31431 Y_RNA.168-201ENST00000363740 102 ntBASIC-0.38□□□□□ -2.47
SDC4P31431 RNA5SP48-201ENST00000363969 126 ntBASIC-0.38□□□□□ -2.47
SDC4P31431 RNU6-514P-201ENST00000384208 107 ntBASIC-0.38□□□□□ -2.47
SDC4P31431 RNU6-1060P-201ENST00000384664 107 ntBASIC-0.38□□□□□ -2.47
SDC4P31431 MIR610-201ENST00000385139 96 ntBASIC-0.38□□□□□ -2.47
SDC4P31431 RNA5SP482-201ENST00000391269 118 ntBASIC-0.38□□□□□ -2.47
SDC4P31431 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC-0.38□□□□□ -2.47
SDC4P31431 RNU7-56P-201ENST00000458744 62 ntBASIC-0.38□□□□□ -2.47
SDC4P31431 RNU7-182P-201ENST00000459009 62 ntBASIC-0.38□□□□□ -2.47
SDC4P31431 AF186996.7-201ENST00000492781 209 ntBASIC-0.38□□□□□ -2.47
SDC4P31431 AC114811.1-201ENST00000507207 168 ntBASIC-0.38□□□□□ -2.47
SDC4P31431 AC091133.4-201ENST00000511142 308 ntBASIC-0.38□□□□□ -2.47
SDC4P31431 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC-0.38□□□□□ -2.47
SDC4P31431 RNU6-344P-201ENST00000516635 111 ntBASIC-0.38□□□□□ -2.47
SDC4P31431 SNORA18.7-201ENST00000516910 131 ntBASIC-0.38□□□□□ -2.47
SDC4P31431 RNU2-46P-201ENST00000517038 113 ntBASIC-0.38□□□□□ -2.47
SDC4P31431 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC-0.38□□□□□ -2.47
SDC4P31431 AGGF1P4-201ENST00000568249 801 ntBASIC-0.38□□□□□ -2.47
SDC4P31431 AC020891.4-201ENST00000605745 93 ntBASIC-0.38□□□□□ -2.47
SDC4P31431 AL355073.2-201ENST00000612106 557 ntBASIC-0.38□□□□□ -2.47
SDC4P31431 AC022418.1-201ENST00000624118 445 ntBASIC-0.38□□□□□ -2.47
SDC4P31431 RNA5SP457-201ENST00000363657 124 ntBASIC-0.39□□□□□ -2.47
SDC4P31431 RNU6-266P-201ENST00000364225 107 ntBASIC-0.39□□□□□ -2.47
SDC4P31431 Y_RNA.302-201ENST00000364997 102 ntBASIC-0.39□□□□□ -2.47
SDC4P31431 RNA5SP128-201ENST00000365305 116 ntBASIC-0.39□□□□□ -2.47
SDC4P31431 RNU6-533P-201ENST00000384144 107 ntBASIC-0.39□□□□□ -2.47
SDC4P31431 MIR562-201ENST00000384894 95 ntBASIC-0.39□□□□□ -2.47
SDC4P31431 SNORD115.1-201ENST00000391109 76 ntBASIC-0.39□□□□□ -2.47
SDC4P31431 RNU2-59P-201ENST00000410482 191 ntBASIC-0.39□□□□□ -2.47
SDC4P31431 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC-0.39□□□□□ -2.47
SDC4P31431 ZNF736P12Y-201ENST00000443152 1243 ntBASIC-0.39□□□□□ -2.47
SDC4P31431 AC069271.1-201ENST00000445577 156 ntBASIC-0.39□□□□□ -2.47
SDC4P31431 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC-0.39□□□□□ -2.47
SDC4P31431 ZNF736P4Y-201ENST00000454995 1243 ntBASIC-0.39□□□□□ -2.47
SDC4P31431 HMGN1P10-201ENST00000474557 553 ntBASIC-0.39□□□□□ -2.47
SDC4P31431 AC091951.3-201ENST00000504093 246 ntBASIC-0.39□□□□□ -2.47
SDC4P31431 AC097462.1-201ENST00000514125 324 ntBASIC-0.39□□□□□ -2.47
SDC4P31431 RNU2-69P-201ENST00000516061 100 ntBASIC-0.39□□□□□ -2.47
SDC4P31431 RNU6-276P-201ENST00000516114 96 ntBASIC-0.39□□□□□ -2.47
SDC4P31431 RNU6-341P-201ENST00000516973 96 ntBASIC-0.39□□□□□ -2.47
SDC4P31431 RNU6-430P-201ENST00000517078 107 ntBASIC-0.39□□□□□ -2.47
SDC4P31431 MIR4771-2-201ENST00000577758 74 ntBASIC-0.39□□□□□ -2.47
SDC4P31431 MIR4771-1-201ENST00000582617 74 ntBASIC-0.39□□□□□ -2.47
SDC4P31431 AC120024.3-201ENST00000603167 156 ntBASIC-0.39□□□□□ -2.47
SDC4P31431 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC-0.39□□□□□ -2.47
SDC4P31431 AL139418.1-201ENST00000613613 177 ntBASIC-0.39□□□□□ -2.47
SDC4P31431 AC138649.3-201ENST00000622154 254 ntBASIC-0.39□□□□□ -2.47
SDC4P31431 Y_RNA.85-201ENST00000363014 111 ntBASIC-0.4□□□□□ -2.47
SDC4P31431 SNORD45.3-201ENST00000363836 72 ntBASIC-0.4□□□□□ -2.47
SDC4P31431 RNU6-660P-201ENST00000364566 109 ntBASIC-0.4□□□□□ -2.47
SDC4P31431 RNU6-934P-201ENST00000365154 107 ntBASIC-0.4□□□□□ -2.47
SDC4P31431 SNORD14.1-201ENST00000365609 90 ntBASIC-0.4□□□□□ -2.47
SDC4P31431 Y_RNA.567-201ENST00000384736 106 ntBASIC-0.4□□□□□ -2.47
SDC4P31431 PCNPP5-201ENST00000452246 481 ntBASIC-0.4□□□□□ -2.47
SDC4P31431 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC-0.4□□□□□ -2.47
SDC4P31431 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC-0.4□□□□□ -2.47
SDC4P31431 RNU6-612P-201ENST00000516909 102 ntBASIC-0.4□□□□□ -2.47
SDC4P31431 RNU7-172P-201ENST00000517125 64 ntBASIC-0.4□□□□□ -2.47
SDC4P31431 MTND1P5-201ENST00000517906 940 ntBASIC-0.4□□□□□ -2.47
SDC4P31431 AP002004.2-201ENST00000531656 154 ntBASIC-0.4□□□□□ -2.47
SDC4P31431 AC008608.1-201ENST00000603910 127 ntBASIC-0.4□□□□□ -2.47
SDC4P31431 RNU6-169P-201ENST00000365336 107 ntBASIC-0.41□□□□□ -2.48
SDC4P31431 SNORA2A-201ENST00000383885 135 ntBASIC-0.41□□□□□ -2.48
SDC4P31431 RNU6-393P-201ENST00000384475 107 ntBASIC-0.41□□□□□ -2.48
SDC4P31431 SNORD73A-201ENST00000386062 65 ntBASIC-0.41□□□□□ -2.48
SDC4P31431 SNORD70.1-201ENST00000391007 85 ntBASIC-0.41□□□□□ -2.48
SDC4P31431 SNORD100-201ENST00000408573 76 ntBASIC-0.41□□□□□ -2.48
SDC4P31431 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC-0.41□□□□□ -2.48
SDC4P31431 AL390729.2-201ENST00000416137 156 ntBASIC-0.41□□□□□ -2.48
SDC4P31431 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC-0.41□□□□□ -2.48
SDC4P31431 MTND3P9-201ENST00000429526 346 ntBASIC-0.41□□□□□ -2.48
SDC4P31431 AC112204.1-201ENST00000502591 103 ntBASIC-0.41□□□□□ -2.48
SDC4P31431 RNU7-129P-201ENST00000516128 62 ntBASIC-0.41□□□□□ -2.48
SDC4P31431 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC-0.41□□□□□ -2.48
SDC4P31431 HIF1AP1-201ENST00000553642 175 ntBASIC-0.41□□□□□ -2.48
SDC4P31431 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC-0.41□□□□□ -2.48
SDC4P31431 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC-0.41□□□□□ -2.48
SDC4P31431 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC-0.41□□□□□ -2.48
SDC4P31431 MIR4676-201ENST00000583078 72 ntBASIC-0.41□□□□□ -2.48
SDC4P31431 SNORD11B-201ENST00000607707 90 ntBASIC-0.41□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 140.2 ms