Protein–RNA interactions for Protein: P31270

HOXA11, Homeobox protein Hox-A11, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA11P31270 MDM2-232ENST00000544561 213 ntTSL 5 BASIC2.38□□□□□ -2.03
HOXA11P31270 AC004486.1-201ENST00000546846 233 ntBASIC2.38□□□□□ -2.03
HOXA11P31270 EIF4A1P12-201ENST00000551910 141 ntBASIC2.38□□□□□ -2.03
HOXA11P31270 AC026470.2-201ENST00000561492 181 ntBASIC2.38□□□□□ -2.03
HOXA11P31270 TEX41-243ENST00000614173 190 ntTSL 5 BASIC2.38□□□□□ -2.03
HOXA11P31270 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.37□□□□□ -2.03
HOXA11P31270 Y_RNA.136-201ENST00000363444 102 ntBASIC2.37□□□□□ -2.03
HOXA11P31270 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.37□□□□□ -2.03
HOXA11P31270 RNU6-926P-201ENST00000384075 107 ntBASIC2.37□□□□□ -2.03
HOXA11P31270 RNU6-20P-201ENST00000384106 107 ntBASIC2.37□□□□□ -2.03
HOXA11P31270 RNU6-378P-201ENST00000384324 107 ntBASIC2.37□□□□□ -2.03
HOXA11P31270 Y_RNA.477-201ENST00000384352 108 ntBASIC2.37□□□□□ -2.03
HOXA11P31270 Y_RNA.595-201ENST00000410403 105 ntBASIC2.37□□□□□ -2.03
HOXA11P31270 RNU2-20P-201ENST00000410425 191 ntBASIC2.37□□□□□ -2.03
HOXA11P31270 ELOCP21-201ENST00000412558 336 ntBASIC2.37□□□□□ -2.03
HOXA11P31270 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.37□□□□□ -2.03
HOXA11P31270 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.37□□□□□ -2.03
HOXA11P31270 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.37□□□□□ -2.03
HOXA11P31270 RNU4-71P-201ENST00000516258 113 ntBASIC2.37□□□□□ -2.03
HOXA11P31270 IGLV3-17-201ENST00000519099 244 ntBASIC2.37□□□□□ -2.03
HOXA11P31270 CYCSP26-201ENST00000534107 320 ntBASIC2.37□□□□□ -2.03
HOXA11P31270 MIR3126-201ENST00000577443 74 ntBASIC2.37□□□□□ -2.03
HOXA11P31270 AC104984.5-201ENST00000586878 94 ntBASIC2.37□□□□□ -2.03
HOXA11P31270 SNRPGP20-201ENST00000604477 205 ntBASIC2.37□□□□□ -2.03
HOXA11P31270 AC010900.2-201ENST00000604508 210 ntBASIC2.37□□□□□ -2.03
HOXA11P31270 AC022441.3-201ENST00000605737 136 ntBASIC2.37□□□□□ -2.03
HOXA11P31270 AL590240.4-201ENST00000616908 390 ntBASIC2.37□□□□□ -2.03
HOXA11P31270 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.37□□□□□ -2.03
HOXA11P31270 MIR219B-201ENST00000637023 88 ntBASIC2.37□□□□□ -2.03
HOXA11P31270 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.37□□□□□ -2.03
HOXA11P31270 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.37□□□□□ -2.03
HOXA11P31270 MTND5P35-201ENST00000557537 1720 ntBASIC2.37□□□□□ -2.03
HOXA11P31270 ZNF204P-201ENST00000416749 2397 ntBASIC2.36□□□□□ -2.03
HOXA11P31270 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
HOXA11P31270 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.36□□□□□ -2.03
HOXA11P31270 SNORD114-1-201ENST00000362705 72 ntBASIC2.36□□□□□ -2.03
HOXA11P31270 RNU6-655P-201ENST00000362858 107 ntBASIC2.36□□□□□ -2.03
HOXA11P31270 Y_RNA.179-201ENST00000363844 90 ntBASIC2.36□□□□□ -2.03
HOXA11P31270 RNU6-793P-201ENST00000384233 104 ntBASIC2.36□□□□□ -2.03
HOXA11P31270 MIR208B-201ENST00000401172 77 ntBASIC2.36□□□□□ -2.03
HOXA11P31270 AL133475.1-201ENST00000404414 305 ntBASIC2.36□□□□□ -2.03
HOXA11P31270 SNORA11.4-201ENST00000408823 129 ntBASIC2.36□□□□□ -2.03
HOXA11P31270 Y_RNA.602-201ENST00000410535 92 ntBASIC2.36□□□□□ -2.03
HOXA11P31270 AL139156.1-201ENST00000412785 841 ntBASIC2.36□□□□□ -2.03
HOXA11P31270 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC2.36□□□□□ -2.03
HOXA11P31270 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.36□□□□□ -2.03
HOXA11P31270 AC091179.3-201ENST00000474761 144 ntBASIC2.36□□□□□ -2.03
HOXA11P31270 UBL5P3-201ENST00000475112 231 ntBASIC2.36□□□□□ -2.03
HOXA11P31270 SNORA25.14-201ENST00000516481 132 ntBASIC2.36□□□□□ -2.03
HOXA11P31270 RNU6-344P-201ENST00000516635 111 ntBASIC2.36□□□□□ -2.03
HOXA11P31270 RNU7-193P-201ENST00000516723 65 ntBASIC2.36□□□□□ -2.03
HOXA11P31270 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.36□□□□□ -2.03
HOXA11P31270 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.36□□□□□ -2.03
HOXA11P31270 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.36□□□□□ -2.03
HOXA11P31270 MZT1P2-201ENST00000604387 248 ntBASIC2.36□□□□□ -2.03
HOXA11P31270 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.36□□□□□ -2.03
HOXA11P31270 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
HOXA11P31270 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.36□□□□□ -2.03
HOXA11P31270 ANKRD30BP1-201ENST00000451052 2186 ntBASIC2.36□□□□□ -2.03
HOXA11P31270 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
HOXA11P31270 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
HOXA11P31270 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
HOXA11P31270 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.35□□□□□ -2.03
HOXA11P31270 UBE2WP1-201ENST00000362030 340 ntBASIC2.35□□□□□ -2.03
HOXA11P31270 RNU6-1266P-201ENST00000362794 105 ntBASIC2.35□□□□□ -2.03
HOXA11P31270 Y_RNA.286-201ENST00000364813 102 ntBASIC2.35□□□□□ -2.03
HOXA11P31270 RNU6-338P-201ENST00000383888 105 ntBASIC2.35□□□□□ -2.03
HOXA11P31270 AL355497.1-201ENST00000406262 551 ntBASIC2.35□□□□□ -2.03
HOXA11P31270 MIR320B2-201ENST00000408479 138 ntBASIC2.35□□□□□ -2.03
HOXA11P31270 RNA5SP181-201ENST00000410246 98 ntBASIC2.35□□□□□ -2.03
HOXA11P31270 AC138623.1-201ENST00000418060 216 ntBASIC2.35□□□□□ -2.03
HOXA11P31270 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.35□□□□□ -2.03
HOXA11P31270 AC009238.1-201ENST00000442165 424 ntBASIC2.35□□□□□ -2.03
HOXA11P31270 AC009237.6-201ENST00000446969 424 ntBASIC2.35□□□□□ -2.03
HOXA11P31270 AC112771.1-201ENST00000463581 102 ntBASIC2.35□□□□□ -2.03
HOXA11P31270 RNU6-138P-201ENST00000515952 107 ntBASIC2.35□□□□□ -2.03
HOXA11P31270 RNU2-31P-201ENST00000516954 155 ntBASIC2.35□□□□□ -2.03
HOXA11P31270 MIR4282-201ENST00000583613 67 ntBASIC2.35□□□□□ -2.03
HOXA11P31270 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC2.35□□□□□ -2.03
HOXA11P31270 RPL17P51-201ENST00000605218 238 ntBASIC2.35□□□□□ -2.03
HOXA11P31270 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
HOXA11P31270 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
HOXA11P31270 U3.9-201ENST00000363823 204 ntBASIC2.34□□□□□ -2.03
HOXA11P31270 RNU6-1175P-201ENST00000365200 107 ntBASIC2.34□□□□□ -2.03
HOXA11P31270 Y_RNA.446-201ENST00000384178 104 ntBASIC2.34□□□□□ -2.03
HOXA11P31270 RNU1-148P-201ENST00000384472 162 ntBASIC2.34□□□□□ -2.03
HOXA11P31270 MIR144-201ENST00000384886 86 ntBASIC2.34□□□□□ -2.03
HOXA11P31270 SNORA48.3-201ENST00000391081 134 ntBASIC2.34□□□□□ -2.03
HOXA11P31270 MIR1289-2-201ENST00000408360 111 ntBASIC2.34□□□□□ -2.03
HOXA11P31270 RNU2-2P-201ENST00000410396 191 ntBASIC2.34□□□□□ -2.03
HOXA11P31270 AL445305.1-201ENST00000432577 575 ntBASIC2.34□□□□□ -2.03
HOXA11P31270 HMGB3P17-201ENST00000504195 649 ntBASIC2.34□□□□□ -2.03
HOXA11P31270 HSPE1P18-201ENST00000517602 280 ntBASIC2.34□□□□□ -2.03
HOXA11P31270 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC2.34□□□□□ -2.03
HOXA11P31270 AC018448.1-201ENST00000552843 316 ntBASIC2.34□□□□□ -2.03
HOXA11P31270 MIR4643-201ENST00000577473 78 ntBASIC2.34□□□□□ -2.03
HOXA11P31270 AC098479.1-201ENST00000609225 154 ntBASIC2.34□□□□□ -2.03
HOXA11P31270 U2.15-201ENST00000611544 191 ntBASIC2.34□□□□□ -2.03
HOXA11P31270 U2.16-201ENST00000613119 191 ntBASIC2.34□□□□□ -2.03
HOXA11P31270 U2.12-201ENST00000613778 191 ntBASIC2.34□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 123.6 ms