Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 MRPS36P4-201ENST00000534436 298 ntBASIC0.25□□□□□ -2.37
COL4A5P29400 AP001180.6-201ENST00000584918 159 ntBASIC0.25□□□□□ -2.37
COL4A5P29400 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.25□□□□□ -2.37
COL4A5P29400 AC073349.3-201ENST00000617616 186 ntBASIC0.25□□□□□ -2.37
COL4A5P29400 U6.108-201ENST00000637764 58 ntBASIC0.25□□□□□ -2.37
COL4A5P29400 AL390237.1-201ENST00000404226 1415 ntBASIC0.25□□□□□ -2.37
COL4A5P29400 ZNF204P-201ENST00000416749 2397 ntBASIC0.25□□□□□ -2.37
COL4A5P29400 RNU6-1266P-201ENST00000362794 105 ntBASIC0.24□□□□□ -2.37
COL4A5P29400 RNA5SP98-201ENST00000363158 137 ntBASIC0.24□□□□□ -2.37
COL4A5P29400 RNU6-1317P-201ENST00000364582 104 ntBASIC0.24□□□□□ -2.37
COL4A5P29400 MTCO2P8-201ENST00000412213 658 ntBASIC0.24□□□□□ -2.37
COL4A5P29400 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC0.24□□□□□ -2.37
COL4A5P29400 AL593851.1-201ENST00000426171 157 ntBASIC0.24□□□□□ -2.37
COL4A5P29400 AC098869.1-201ENST00000481627 292 ntBASIC0.24□□□□□ -2.37
COL4A5P29400 SNORA25.14-201ENST00000516481 132 ntBASIC0.24□□□□□ -2.37
COL4A5P29400 AC106038.2-201ENST00000520706 568 ntBASIC0.24□□□□□ -2.37
COL4A5P29400 AC011458.1-201ENST00000604034 617 ntBASIC0.24□□□□□ -2.37
COL4A5P29400 AC122133.1-201ENST00000613964 233 ntBASIC0.24□□□□□ -2.37
COL4A5P29400 AC072046.2-201ENST00000618366 268 ntBASIC0.24□□□□□ -2.37
COL4A5P29400 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC0.24□□□□□ -2.37
COL4A5P29400 ANKRD20A17P-201ENST00000511745 1330 ntBASIC0.24□□□□□ -2.37
COL4A5P29400 AC090625.1-201ENST00000357130 210 ntBASIC0.24□□□□□ -2.37
COL4A5P29400 RNU6-1214P-201ENST00000363650 109 ntBASIC0.24□□□□□ -2.37
COL4A5P29400 RNU6-923P-201ENST00000364753 107 ntBASIC0.24□□□□□ -2.37
COL4A5P29400 RNU6-1303P-201ENST00000364841 107 ntBASIC0.24□□□□□ -2.37
COL4A5P29400 SNORD111-201ENST00000408139 94 ntBASIC0.24□□□□□ -2.37
COL4A5P29400 RNU6-195P-201ENST00000411352 109 ntBASIC0.24□□□□□ -2.37
COL4A5P29400 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC0.24□□□□□ -2.37
COL4A5P29400 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC0.24□□□□□ -2.37
COL4A5P29400 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC0.24□□□□□ -2.37
COL4A5P29400 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC0.24□□□□□ -2.37
COL4A5P29400 SNORD65B-201ENST00000459126 73 ntBASIC0.24□□□□□ -2.37
COL4A5P29400 RNU7-167P-201ENST00000459160 62 ntBASIC0.24□□□□□ -2.37
COL4A5P29400 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC0.24□□□□□ -2.37
COL4A5P29400 RPL23AP75-201ENST00000491601 451 ntBASIC0.24□□□□□ -2.37
COL4A5P29400 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.24□□□□□ -2.37
COL4A5P29400 RNU6-612P-201ENST00000516909 102 ntBASIC0.24□□□□□ -2.37
COL4A5P29400 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC0.24□□□□□ -2.37
COL4A5P29400 AC008536.2-201ENST00000607284 349 ntBASIC0.24□□□□□ -2.37
COL4A5P29400 AL136317.1-201ENST00000612653 226 ntBASIC0.24□□□□□ -2.37
COL4A5P29400 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.24□□□□□ -2.37
COL4A5P29400 SEPT14P17-201ENST00000617978 177 ntBASIC0.24□□□□□ -2.37
COL4A5P29400 7SK.10-201ENST00000621414 298 ntBASIC0.24□□□□□ -2.37
COL4A5P29400 AC099654.13-201ENST00000639774 207 ntBASIC0.24□□□□□ -2.37
COL4A5P29400 RNU5B-2P-201ENST00000363036 113 ntBASIC0.23□□□□□ -2.37
COL4A5P29400 RNU6-833P-201ENST00000363486 107 ntBASIC0.23□□□□□ -2.37
COL4A5P29400 RNU6-280P-201ENST00000364145 104 ntBASIC0.23□□□□□ -2.37
COL4A5P29400 RNU6-606P-201ENST00000384721 111 ntBASIC0.23□□□□□ -2.37
COL4A5P29400 SNORD73A-201ENST00000386062 65 ntBASIC0.23□□□□□ -2.37
COL4A5P29400 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC0.23□□□□□ -2.37
COL4A5P29400 BX295541.1-201ENST00000417774 250 ntBASIC0.23□□□□□ -2.37
COL4A5P29400 MTND3P9-201ENST00000429526 346 ntBASIC0.23□□□□□ -2.37
COL4A5P29400 CETN4P-201ENST00000432407 469 ntBASIC0.23□□□□□ -2.37
COL4A5P29400 RPS29P27-201ENST00000463711 170 ntBASIC0.23□□□□□ -2.37
COL4A5P29400 CYCTP-201ENST00000504253 315 ntBASIC0.23□□□□□ -2.37
COL4A5P29400 RNU6-1110P-201ENST00000516462 101 ntBASIC0.23□□□□□ -2.37
COL4A5P29400 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.23□□□□□ -2.37
COL4A5P29400 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC0.23□□□□□ -2.37
COL4A5P29400 MTCO3P23-201ENST00000561363 289 ntBASIC0.23□□□□□ -2.37
COL4A5P29400 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC0.23□□□□□ -2.37
COL4A5P29400 AC087683.2-201ENST00000611384 326 ntBASIC0.23□□□□□ -2.37
COL4A5P29400 AC240442.1-201ENST00000616055 283 ntBASIC0.23□□□□□ -2.37
COL4A5P29400 AC006504.8-201ENST00000621046 635 ntBASIC0.23□□□□□ -2.37
COL4A5P29400 MIR6516-201ENST00000630554 81 ntBASIC0.23□□□□□ -2.37
COL4A5P29400 AC068137.4-201ENST00000638485 296 ntBASIC0.23□□□□□ -2.37
COL4A5P29400 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.23□□□□□ -2.37
COL4A5P29400 SNORA33-201ENST00000363664 130 ntBASIC0.22□□□□□ -2.37
COL4A5P29400 RNU6-137P-201ENST00000363680 108 ntBASIC0.22□□□□□ -2.37
COL4A5P29400 RNU6-933P-201ENST00000384424 107 ntBASIC0.22□□□□□ -2.37
COL4A5P29400 RNA5SP482-201ENST00000391269 118 ntBASIC0.22□□□□□ -2.37
COL4A5P29400 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC0.22□□□□□ -2.37
COL4A5P29400 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC0.22□□□□□ -2.37
COL4A5P29400 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.22□□□□□ -2.37
COL4A5P29400 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC0.22□□□□□ -2.37
COL4A5P29400 AL049830.1-201ENST00000468034 425 ntBASIC0.22□□□□□ -2.37
COL4A5P29400 OR9P1P-201ENST00000496431 281 ntBASIC0.22□□□□□ -2.37
COL4A5P29400 AC022493.2-201ENST00000506122 481 ntBASIC0.22□□□□□ -2.37
COL4A5P29400 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.22□□□□□ -2.37
COL4A5P29400 AC068790.2-201ENST00000602601 557 ntBASIC0.22□□□□□ -2.37
COL4A5P29400 SNORD11B-201ENST00000607707 90 ntBASIC0.22□□□□□ -2.37
COL4A5P29400 AL357075.2-201ENST00000614906 189 ntBASIC0.22□□□□□ -2.37
COL4A5P29400 MIR103A2-201ENST00000362154 78 ntBASIC0.21□□□□□ -2.38
COL4A5P29400 RNU5F-3P-201ENST00000363767 117 ntBASIC0.21□□□□□ -2.38
COL4A5P29400 RNU6-82P-201ENST00000363970 107 ntBASIC0.21□□□□□ -2.38
COL4A5P29400 MIR604-201ENST00000384880 94 ntBASIC0.21□□□□□ -2.38
COL4A5P29400 U8.16-201ENST00000391279 133 ntBASIC0.21□□□□□ -2.38
COL4A5P29400 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC0.21□□□□□ -2.38
COL4A5P29400 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC0.21□□□□□ -2.38
COL4A5P29400 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC0.21□□□□□ -2.38
COL4A5P29400 AC245047.8-201ENST00000456455 284 ntBASIC0.21□□□□□ -2.38
COL4A5P29400 snoU13.6-201ENST00000458785 104 ntBASIC0.21□□□□□ -2.38
COL4A5P29400 MTCO3P38-201ENST00000468910 766 ntBASIC0.21□□□□□ -2.38
COL4A5P29400 SNORD27.1-201ENST00000516319 72 ntBASIC0.21□□□□□ -2.38
COL4A5P29400 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC0.21□□□□□ -2.38
COL4A5P29400 AL137161.1-201ENST00000532231 390 ntBASIC0.21□□□□□ -2.38
COL4A5P29400 MIR4438-201ENST00000585271 93 ntBASIC0.21□□□□□ -2.38
COL4A5P29400 AC080078.2-201ENST00000603766 501 ntBASIC0.21□□□□□ -2.38
COL4A5P29400 RNU6-1120P-201ENST00000362988 108 ntBASIC0.21□□□□□ -2.38
COL4A5P29400 RNU6-214P-201ENST00000384130 107 ntBASIC0.21□□□□□ -2.38
COL4A5P29400 RNU6-784P-201ENST00000384330 106 ntBASIC0.21□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 119.7 ms