Protein–RNA interactions for Protein: P27694

RPA1, Replication protein A 70 kDa DNA-binding subunit, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1P27694 AL117336.2-201ENST00000602435 335 ntBASIC1.53□□□□□ -2.16
RPA1P27694 MTND5P10-201ENST00000603719 1809 ntBASIC1.53□□□□□ -2.16
RPA1P27694 BX322639.1-202ENST00000423987 2213 ntBASIC1.52□□□□□ -2.17
RPA1P27694 ZNF299P-201ENST00000406845 1804 ntBASIC1.52□□□□□ -2.17
RPA1P27694 RNU4-73P-201ENST00000363164 141 ntBASIC1.52□□□□□ -2.17
RPA1P27694 Y_RNA.106-201ENST00000363189 100 ntBASIC1.52□□□□□ -2.17
RPA1P27694 RNU6-727P-201ENST00000363592 107 ntBASIC1.52□□□□□ -2.17
RPA1P27694 RNU6-873P-201ENST00000363833 107 ntBASIC1.52□□□□□ -2.17
RPA1P27694 SNORA63D-201ENST00000364359 132 ntBASIC1.52□□□□□ -2.17
RPA1P27694 SNORD87-201ENST00000364849 89 ntBASIC1.52□□□□□ -2.17
RPA1P27694 RNU6-1235P-201ENST00000384559 107 ntBASIC1.52□□□□□ -2.17
RPA1P27694 MIR10B-201ENST00000385011 110 ntBASIC1.52□□□□□ -2.17
RPA1P27694 AF228730.4-201ENST00000421457 183 ntBASIC1.52□□□□□ -2.17
RPA1P27694 AC009237.7-201ENST00000447357 229 ntBASIC1.52□□□□□ -2.17
RPA1P27694 RNU6-498P-201ENST00000459468 107 ntBASIC1.52□□□□□ -2.17
RPA1P27694 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC1.52□□□□□ -2.17
RPA1P27694 RNU6-1146P-201ENST00000516282 102 ntBASIC1.52□□□□□ -2.17
RPA1P27694 Y_RNA.718-201ENST00000517110 102 ntBASIC1.52□□□□□ -2.17
RPA1P27694 RNU6-902P-201ENST00000517212 91 ntBASIC1.52□□□□□ -2.17
RPA1P27694 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC1.52□□□□□ -2.17
RPA1P27694 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.52□□□□□ -2.17
RPA1P27694 MIR4421-201ENST00000578133 69 ntBASIC1.52□□□□□ -2.17
RPA1P27694 MIR4795-201ENST00000584182 89 ntBASIC1.52□□□□□ -2.17
RPA1P27694 MZT1P2-201ENST00000604387 248 ntBASIC1.52□□□□□ -2.17
RPA1P27694 AC113139.1-201ENST00000605049 239 ntBASIC1.52□□□□□ -2.17
RPA1P27694 AL357075.2-201ENST00000614906 189 ntBASIC1.52□□□□□ -2.17
RPA1P27694 AC104985.2-201ENST00000620598 500 ntBASIC1.52□□□□□ -2.17
RPA1P27694 MTND5P16-201ENST00000460269 1703 ntBASIC1.52□□□□□ -2.17
RPA1P27694 RNY1P16-201ENST00000363063 111 ntBASIC1.51□□□□□ -2.17
RPA1P27694 Y_RNA.140-201ENST00000363474 103 ntBASIC1.51□□□□□ -2.17
RPA1P27694 RNU4-9P-201ENST00000364951 139 ntBASIC1.51□□□□□ -2.17
RPA1P27694 Y_RNA.419-201ENST00000384041 102 ntBASIC1.51□□□□□ -2.17
RPA1P27694 MIR559-201ENST00000385188 96 ntBASIC1.51□□□□□ -2.17
RPA1P27694 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.51□□□□□ -2.17
RPA1P27694 AC245047.4-201ENST00000433189 144 ntBASIC1.51□□□□□ -2.17
RPA1P27694 HSPE1P24-201ENST00000450782 238 ntBASIC1.51□□□□□ -2.17
RPA1P27694 RPL30P15-201ENST00000457129 321 ntBASIC1.51□□□□□ -2.17
RPA1P27694 Y_RNA.635-201ENST00000459041 101 ntBASIC1.51□□□□□ -2.17
RPA1P27694 AC105758.1-201ENST00000506038 399 ntBASIC1.51□□□□□ -2.17
RPA1P27694 FGF7P4-201ENST00000509595 295 ntBASIC1.51□□□□□ -2.17
RPA1P27694 AC011406.1-201ENST00000512440 370 ntBASIC1.51□□□□□ -2.17
RPA1P27694 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.51□□□□□ -2.17
RPA1P27694 AL590705.4-201ENST00000532209 134 ntBASIC1.51□□□□□ -2.17
RPA1P27694 AC084364.2-201ENST00000546924 395 ntBASIC1.51□□□□□ -2.17
RPA1P27694 AP001094.1-201ENST00000579805 193 ntBASIC1.51□□□□□ -2.17
RPA1P27694 MIR5006-201ENST00000583027 110 ntBASIC1.51□□□□□ -2.17
RPA1P27694 AC125232.2-201ENST00000592457 143 ntBASIC1.51□□□□□ -2.17
RPA1P27694 LARP7P1-201ENST00000605576 316 ntBASIC1.51□□□□□ -2.17
RPA1P27694 AC087588.2-201ENST00000617667 426 ntBASIC1.51□□□□□ -2.17
RPA1P27694 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.51□□□□□ -2.17
RPA1P27694 MIR378A-201ENST00000362177 66 ntBASIC1.5□□□□□ -2.17
RPA1P27694 RNA5SP361-201ENST00000362686 118 ntBASIC1.5□□□□□ -2.17
RPA1P27694 Y_RNA.263-201ENST00000364659 114 ntBASIC1.5□□□□□ -2.17
RPA1P27694 RNU6-867P-201ENST00000364956 107 ntBASIC1.5□□□□□ -2.17
RPA1P27694 Y_RNA.319-201ENST00000365138 92 ntBASIC1.5□□□□□ -2.17
RPA1P27694 Y_RNA.415-201ENST00000384012 112 ntBASIC1.5□□□□□ -2.17
RPA1P27694 RNU6-708P-201ENST00000384217 107 ntBASIC1.5□□□□□ -2.17
RPA1P27694 Y_RNA.496-201ENST00000384444 101 ntBASIC1.5□□□□□ -2.17
RPA1P27694 AL117342.1-201ENST00000404861 406 ntBASIC1.5□□□□□ -2.17
RPA1P27694 RN7SKP51-201ENST00000410781 304 ntBASIC1.5□□□□□ -2.17
RPA1P27694 USMG5P1-201ENST00000425964 177 ntBASIC1.5□□□□□ -2.17
RPA1P27694 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC1.5□□□□□ -2.17
RPA1P27694 AC096644.2-201ENST00000429278 159 ntBASIC1.5□□□□□ -2.17
RPA1P27694 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC1.5□□□□□ -2.17
RPA1P27694 MIR2053-201ENST00000459295 91 ntBASIC1.5□□□□□ -2.17
RPA1P27694 AC091179.3-201ENST00000474761 144 ntBASIC1.5□□□□□ -2.17
RPA1P27694 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.5□□□□□ -2.17
RPA1P27694 RNU6-1041P-201ENST00000516254 102 ntBASIC1.5□□□□□ -2.17
RPA1P27694 RNU1-92P-201ENST00000517017 135 ntBASIC1.5□□□□□ -2.17
RPA1P27694 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC1.5□□□□□ -2.17
RPA1P27694 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.5□□□□□ -2.17
RPA1P27694 ICE2P2-201ENST00000483823 2787 ntBASIC1.49□□□□□ -2.17
RPA1P27694 RNU4-79P-201ENST00000362764 141 ntBASIC1.49□□□□□ -2.17
RPA1P27694 SNORA33-201ENST00000363664 130 ntBASIC1.49□□□□□ -2.17
RPA1P27694 RNU6-271P-201ENST00000363858 105 ntBASIC1.49□□□□□ -2.17
RPA1P27694 SNORD115-32-201ENST00000364079 82 ntBASIC1.49□□□□□ -2.17
RPA1P27694 Y_RNA.315-201ENST00000365117 102 ntBASIC1.49□□□□□ -2.17
RPA1P27694 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
RPA1P27694 RNU6-203P-201ENST00000384038 104 ntBASIC1.49□□□□□ -2.17
RPA1P27694 RNU6-975P-201ENST00000384296 105 ntBASIC1.49□□□□□ -2.17
RPA1P27694 Y_RNA.557-201ENST00000384680 107 ntBASIC1.49□□□□□ -2.17
RPA1P27694 MIR758-201ENST00000390227 88 ntBASIC1.49□□□□□ -2.17
RPA1P27694 RNU6-159P-201ENST00000391080 106 ntBASIC1.49□□□□□ -2.17
RPA1P27694 RNU6-1001P-201ENST00000411265 100 ntBASIC1.49□□□□□ -2.17
RPA1P27694 RNU1-123P-201ENST00000458950 160 ntBASIC1.49□□□□□ -2.17
RPA1P27694 RPS26P55-201ENST00000471178 356 ntBASIC1.49□□□□□ -2.17
RPA1P27694 HMGN2P9-201ENST00000476875 229 ntBASIC1.49□□□□□ -2.17
RPA1P27694 AC022493.2-201ENST00000506122 481 ntBASIC1.49□□□□□ -2.17
RPA1P27694 Y_RNA.661-201ENST00000516003 99 ntBASIC1.49□□□□□ -2.17
RPA1P27694 RNA5SP458-201ENST00000516188 119 ntBASIC1.49□□□□□ -2.17
RPA1P27694 SNORA25.14-201ENST00000516481 132 ntBASIC1.49□□□□□ -2.17
RPA1P27694 RNU1-117P-201ENST00000517041 158 ntBASIC1.49□□□□□ -2.17
RPA1P27694 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC1.49□□□□□ -2.17
RPA1P27694 AP002001.1-203ENST00000534002 267 ntBASIC1.49□□□□□ -2.17
RPA1P27694 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC1.49□□□□□ -2.17
RPA1P27694 RRN3P3-201ENST00000549207 578 ntBASIC1.49□□□□□ -2.17
RPA1P27694 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.49□□□□□ -2.17
RPA1P27694 MIR5695-201ENST00000579717 85 ntBASIC1.49□□□□□ -2.17
RPA1P27694 MIR3124-201ENST00000582636 67 ntBASIC1.49□□□□□ -2.17
RPA1P27694 C8orf59P2-201ENST00000603441 271 ntBASIC1.49□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms