Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 U2.19-201ENST00000618602 191 ntBASIC2.67□□□□□ -1.98
CD40P25942 RNU2-1-201ENST00000618664 191 ntBASIC2.67□□□□□ -1.98
CD40P25942 U2.6-201ENST00000619225 191 ntBASIC2.67□□□□□ -1.98
CD40P25942 U2.5-201ENST00000619465 191 ntBASIC2.67□□□□□ -1.98
CD40P25942 U2.10-201ENST00000620268 191 ntBASIC2.67□□□□□ -1.98
CD40P25942 5S_rRNA.13-201ENST00000622298 123 ntBASIC2.67□□□□□ -1.98
CD40P25942 AC068647.2-201ENST00000637380 353 ntBASIC2.67□□□□□ -1.98
CD40P25942 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
CD40P25942 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
CD40P25942 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC2.67□□□□□ -1.98
CD40P25942 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
CD40P25942 CENPCP1-201ENST00000533085 2578 ntBASIC2.66□□□□□ -1.98
CD40P25942 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC2.66□□□□□ -1.98
CD40P25942 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC2.66□□□□□ -1.98
CD40P25942 MIR22-201ENST00000362190 85 ntBASIC2.66□□□□□ -1.98
CD40P25942 SNORD115-3-201ENST00000363100 82 ntBASIC2.66□□□□□ -1.98
CD40P25942 RNU6-1020P-201ENST00000363684 107 ntBASIC2.66□□□□□ -1.98
CD40P25942 RNU6-47P-201ENST00000383866 107 ntBASIC2.66□□□□□ -1.98
CD40P25942 SNORA54-201ENST00000384281 123 ntBASIC2.66□□□□□ -1.98
CD40P25942 MIR518C-201ENST00000384822 101 ntBASIC2.66□□□□□ -1.98
CD40P25942 SNORD67-201ENST00000390833 111 ntBASIC2.66□□□□□ -1.98
CD40P25942 RNU6-493P-201ENST00000391321 108 ntBASIC2.66□□□□□ -1.98
CD40P25942 OOSP1P1-201ENST00000423265 274 ntBASIC2.66□□□□□ -1.98
CD40P25942 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.66□□□□□ -1.98
CD40P25942 AC104332.1-201ENST00000440471 797 ntBASIC2.66□□□□□ -1.98
CD40P25942 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.66□□□□□ -1.98
CD40P25942 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.66□□□□□ -1.98
CD40P25942 RNU7-141P-201ENST00000459304 62 ntBASIC2.66□□□□□ -1.98
CD40P25942 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC2.66□□□□□ -1.98
CD40P25942 HMGB3P3-201ENST00000510526 400 ntBASIC2.66□□□□□ -1.98
CD40P25942 AC011406.1-201ENST00000512440 370 ntBASIC2.66□□□□□ -1.98
CD40P25942 RNU6-1041P-201ENST00000516254 102 ntBASIC2.66□□□□□ -1.98
CD40P25942 CYCSP26-201ENST00000534107 320 ntBASIC2.66□□□□□ -1.98
CD40P25942 AP002392.1-201ENST00000537692 208 ntBASIC2.66□□□□□ -1.98
CD40P25942 AC026271.5-201ENST00000577873 130 ntBASIC2.66□□□□□ -1.98
CD40P25942 MIR5692C2-201ENST00000577959 77 ntBASIC2.66□□□□□ -1.98
CD40P25942 MIR4658-201ENST00000584344 65 ntBASIC2.66□□□□□ -1.98
CD40P25942 MIR4438-201ENST00000585271 93 ntBASIC2.66□□□□□ -1.98
CD40P25942 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.66□□□□□ -1.98
CD40P25942 AC004832.4-201ENST00000608952 331 ntBASIC2.66□□□□□ -1.98
CD40P25942 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.66□□□□□ -1.98
CD40P25942 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.66□□□□□ -1.98
CD40P25942 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
CD40P25942 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC2.65□□□□□ -1.98
CD40P25942 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
CD40P25942 RNU6-653P-201ENST00000363074 106 ntBASIC2.65□□□□□ -1.99
CD40P25942 RNU6-899P-201ENST00000363947 107 ntBASIC2.65□□□□□ -1.99
CD40P25942 Y_RNA.293-201ENST00000364908 93 ntBASIC2.65□□□□□ -1.99
CD40P25942 RNU6-805P-201ENST00000365643 106 ntBASIC2.65□□□□□ -1.99
CD40P25942 RNU6-417P-201ENST00000384712 107 ntBASIC2.65□□□□□ -1.99
CD40P25942 MIR181A2-201ENST00000384863 110 ntBASIC2.65□□□□□ -1.99
CD40P25942 RNA5SP217-201ENST00000515959 91 ntBASIC2.65□□□□□ -1.99
CD40P25942 RPPH1-2P-201ENST00000516688 293 ntBASIC2.65□□□□□ -1.99
CD40P25942 SCARNA20.6-201ENST00000517251 106 ntBASIC2.65□□□□□ -1.99
CD40P25942 AL137100.2-201ENST00000555786 315 ntBASIC2.65□□□□□ -1.99
CD40P25942 AC093732.2-201ENST00000607950 274 ntBASIC2.65□□□□□ -1.99
CD40P25942 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
CD40P25942 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.65□□□□□ -1.99
CD40P25942 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.65□□□□□ -1.99
CD40P25942 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.64□□□□□ -1.99
CD40P25942 snoU2-30.2-201ENST00000362805 70 ntBASIC2.64□□□□□ -1.99
CD40P25942 RNU6-209P-201ENST00000384118 107 ntBASIC2.64□□□□□ -1.99
CD40P25942 RNU1-148P-201ENST00000384472 162 ntBASIC2.64□□□□□ -1.99
CD40P25942 SNORA44-201ENST00000384584 132 ntBASIC2.64□□□□□ -1.99
CD40P25942 RPL32P35-201ENST00000415214 394 ntBASIC2.64□□□□□ -1.99
CD40P25942 AC022018.1-201ENST00000430685 241 ntBASIC2.64□□□□□ -1.99
CD40P25942 RN7SL442P-201ENST00000473804 320 ntBASIC2.64□□□□□ -1.99
CD40P25942 AC117454.1-201ENST00000491120 168 ntBASIC2.64□□□□□ -1.99
CD40P25942 AC107393.1-201ENST00000512403 346 ntBASIC2.64□□□□□ -1.99
CD40P25942 AC097462.1-201ENST00000514125 324 ntBASIC2.64□□□□□ -1.99
CD40P25942 RNU6-1146P-201ENST00000516282 102 ntBASIC2.64□□□□□ -1.99
CD40P25942 MIR3126-201ENST00000577443 74 ntBASIC2.64□□□□□ -1.99
CD40P25942 AC068700.1-201ENST00000565862 3754 ntBASIC2.64□□□□□ -1.99
CD40P25942 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
CD40P25942 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
CD40P25942 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
CD40P25942 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.63□□□□□ -1.99
CD40P25942 RNU1-22P-201ENST00000363334 158 ntBASIC2.63□□□□□ -1.99
CD40P25942 Y_RNA.150-201ENST00000363562 102 ntBASIC2.63□□□□□ -1.99
CD40P25942 U8.7-201ENST00000364940 136 ntBASIC2.63□□□□□ -1.99
CD40P25942 MIR634-201ENST00000385208 97 ntBASIC2.63□□□□□ -1.99
CD40P25942 SNORA26.7-201ENST00000391288 122 ntBASIC2.63□□□□□ -1.99
CD40P25942 MIR548I3-201ENST00000408378 149 ntBASIC2.63□□□□□ -1.99
CD40P25942 MIR548I1-201ENST00000408810 149 ntBASIC2.63□□□□□ -1.99
CD40P25942 AC010154.1-201ENST00000425857 269 ntBASIC2.63□□□□□ -1.99
CD40P25942 AC245102.2-201ENST00000448956 180 ntBASIC2.63□□□□□ -1.99
CD40P25942 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC2.63□□□□□ -1.99
CD40P25942 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.63□□□□□ -1.99
CD40P25942 RNU7-172P-201ENST00000517125 64 ntBASIC2.63□□□□□ -1.99
CD40P25942 SUMO2P18-201ENST00000518873 252 ntBASIC2.63□□□□□ -1.99
CD40P25942 AC022559.1-201ENST00000520905 205 ntBASIC2.63□□□□□ -1.99
CD40P25942 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.63□□□□□ -1.99
CD40P25942 AC104027.1-201ENST00000521887 300 ntBASIC2.63□□□□□ -1.99
CD40P25942 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
CD40P25942 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.63□□□□□ -1.99
CD40P25942 MIR4308-201ENST00000580634 81 ntBASIC2.63□□□□□ -1.99
CD40P25942 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
CD40P25942 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.62□□□□□ -1.99
CD40P25942 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
CD40P25942 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.62□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms