Protein–RNA interactions for Protein: P23469

PTPRE, Receptor-type tyrosine-protein phosphatase epsilon, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPREP23469 AL110115.1-201ENST00000614396 364 ntBASIC4.49□□□□□ -1.69
PTPREP23469 AC090517.3-201ENST00000625170 141 ntBASIC4.49□□□□□ -1.69
PTPREP23469 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
PTPREP23469 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
PTPREP23469 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.48□□□□□ -1.69
PTPREP23469 SNORD115-13-201ENST00000363358 82 ntBASIC4.48□□□□□ -1.69
PTPREP23469 SNORD115-16-201ENST00000363887 82 ntBASIC4.48□□□□□ -1.69
PTPREP23469 RNU1-133P-201ENST00000364867 167 ntBASIC4.48□□□□□ -1.69
PTPREP23469 SNORD115-1-201ENST00000364961 82 ntBASIC4.48□□□□□ -1.69
PTPREP23469 SNORD116-22-201ENST00000384430 92 ntBASIC4.48□□□□□ -1.69
PTPREP23469 RNU6-938P-201ENST00000411285 103 ntBASIC4.48□□□□□ -1.69
PTPREP23469 HMGN2P31-201ENST00000432430 273 ntBASIC4.48□□□□□ -1.69
PTPREP23469 TRBV25OR9-2-201ENST00000438417 374 ntBASIC4.48□□□□□ -1.69
PTPREP23469 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC4.48□□□□□ -1.69
PTPREP23469 MIR548Z-201ENST00000584743 97 ntBASIC4.48□□□□□ -1.69
PTPREP23469 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.48□□□□□ -1.69
PTPREP23469 LINC02471-203ENST00000641941 4752 ntBASIC4.48□□□□□ -1.69
PTPREP23469 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.47□□□□□ -1.69
PTPREP23469 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.47□□□□□ -1.69
PTPREP23469 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.47□□□□□ -1.69
PTPREP23469 Y_RNA.253-201ENST00000364562 112 ntBASIC4.47□□□□□ -1.69
PTPREP23469 Y_RNA.410-201ENST00000383992 113 ntBASIC4.47□□□□□ -1.69
PTPREP23469 BTF3P4-201ENST00000418852 495 ntBASIC4.47□□□□□ -1.69
PTPREP23469 AL035423.1-201ENST00000420331 213 ntBASIC4.47□□□□□ -1.69
PTPREP23469 AC113410.1-201ENST00000505029 247 ntBASIC4.47□□□□□ -1.69
PTPREP23469 RNU7-70P-201ENST00000516941 66 ntBASIC4.47□□□□□ -1.69
PTPREP23469 AC022217.4-201ENST00000604389 163 ntBASIC4.47□□□□□ -1.69
PTPREP23469 FAM35DP-201ENST00000323387 2712 ntBASIC4.47□□□□□ -1.69
PTPREP23469 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC4.47□□□□□ -1.69
PTPREP23469 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.47□□□□□ -1.69
PTPREP23469 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
PTPREP23469 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
PTPREP23469 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.46□□□□□ -1.7
PTPREP23469 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
PTPREP23469 Y_RNA.507-201ENST00000384500 99 ntBASIC4.46□□□□□ -1.7
PTPREP23469 MIR183-201ENST00000384958 110 ntBASIC4.46□□□□□ -1.7
PTPREP23469 MIR520G-201ENST00000385064 90 ntBASIC4.46□□□□□ -1.7
PTPREP23469 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC4.46□□□□□ -1.7
PTPREP23469 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC4.46□□□□□ -1.7
PTPREP23469 AL139247.1-201ENST00000422768 325 ntBASIC4.46□□□□□ -1.7
PTPREP23469 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC4.46□□□□□ -1.7
PTPREP23469 MIR4694-201ENST00000578534 80 ntBASIC4.46□□□□□ -1.7
PTPREP23469 MIR4305-201ENST00000583252 102 ntBASIC4.46□□□□□ -1.7
PTPREP23469 AL591424.2-201ENST00000617023 128 ntBASIC4.46□□□□□ -1.7
PTPREP23469 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
PTPREP23469 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
PTPREP23469 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.45□□□□□ -1.7
PTPREP23469 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.45□□□□□ -1.7
PTPREP23469 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.45□□□□□ -1.7
PTPREP23469 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
PTPREP23469 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
PTPREP23469 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC4.45□□□□□ -1.7
PTPREP23469 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.45□□□□□ -1.7
PTPREP23469 Y_RNA.190-201ENST00000363964 101 ntBASIC4.45□□□□□ -1.7
PTPREP23469 RNU6-1189P-201ENST00000383958 107 ntBASIC4.45□□□□□ -1.7
PTPREP23469 AC106707.2-201ENST00000484182 374 ntBASIC4.45□□□□□ -1.7
PTPREP23469 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC4.45□□□□□ -1.7
PTPREP23469 RNU6-1018P-201ENST00000516577 106 ntBASIC4.45□□□□□ -1.7
PTPREP23469 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC4.45□□□□□ -1.7
PTPREP23469 MIR3690-201ENST00000580266 75 ntBASIC4.45□□□□□ -1.7
PTPREP23469 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
PTPREP23469 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC4.45□□□□□ -1.7
PTPREP23469 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
PTPREP23469 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC4.44□□□□□ -1.7
PTPREP23469 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.44□□□□□ -1.7
PTPREP23469 RNU6-832P-201ENST00000363319 107 ntBASIC4.44□□□□□ -1.7
PTPREP23469 RNU6-219P-201ENST00000364728 107 ntBASIC4.44□□□□□ -1.7
PTPREP23469 RNA5SP189-201ENST00000364920 115 ntBASIC4.44□□□□□ -1.7
PTPREP23469 MIR483-201ENST00000385070 76 ntBASIC4.44□□□□□ -1.7
PTPREP23469 MIR577-201ENST00000385196 96 ntBASIC4.44□□□□□ -1.7
PTPREP23469 RPS29P4-201ENST00000414733 161 ntBASIC4.44□□□□□ -1.7
PTPREP23469 RNU1-131P-201ENST00000458943 161 ntBASIC4.44□□□□□ -1.7
PTPREP23469 AC104619.4-201ENST00000510773 249 ntBASIC4.44□□□□□ -1.7
PTPREP23469 SCGB1D5P-201ENST00000515134 247 ntBASIC4.44□□□□□ -1.7
PTPREP23469 RNU2-35P-201ENST00000516446 142 ntBASIC4.44□□□□□ -1.7
PTPREP23469 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC4.44□□□□□ -1.7
PTPREP23469 MIR5187-201ENST00000583479 76 ntBASIC4.44□□□□□ -1.7
PTPREP23469 MIR3922-201ENST00000585192 84 ntBASIC4.44□□□□□ -1.7
PTPREP23469 LINC00901.1-201ENST00000617252 152 ntBASIC4.44□□□□□ -1.7
PTPREP23469 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
PTPREP23469 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
PTPREP23469 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
PTPREP23469 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
PTPREP23469 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.43□□□□□ -1.7
PTPREP23469 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
PTPREP23469 SNORD115-35-201ENST00000365122 82 ntBASIC4.43□□□□□ -1.7
PTPREP23469 MRPL35P3-201ENST00000421557 364 ntBASIC4.43□□□□□ -1.7
PTPREP23469 SNRPGP5-201ENST00000456003 220 ntBASIC4.43□□□□□ -1.7
PTPREP23469 RN7SL293P-201ENST00000481765 281 ntBASIC4.43□□□□□ -1.7
PTPREP23469 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC4.43□□□□□ -1.7
PTPREP23469 U3.45-201ENST00000607547 219 ntBASIC4.43□□□□□ -1.7
PTPREP23469 U6.105-201ENST00000637379 88 ntBASIC4.43□□□□□ -1.7
PTPREP23469 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
PTPREP23469 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
PTPREP23469 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.43□□□□□ -1.7
PTPREP23469 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
PTPREP23469 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.43□□□□□ -1.7
PTPREP23469 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
PTPREP23469 AC073346.2-201ENST00000624724 2058 ntBASIC4.42□□□□□ -1.7
PTPREP23469 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms