Protein–RNA interactions for Protein: P20339

RAB5A, Ras-related protein Rab-5A, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5AP20339 SEPT14P2-201ENST00000453405 183 ntBASIC0.67□□□□□ -2.3
RAB5AP20339 RPL39P39-201ENST00000455840 151 ntBASIC0.67□□□□□ -2.3
RAB5AP20339 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC0.67□□□□□ -2.3
RAB5AP20339 AP000870.1-201ENST00000472927 406 ntBASIC0.67□□□□□ -2.3
RAB5AP20339 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC0.67□□□□□ -2.3
RAB5AP20339 AC022493.2-201ENST00000506122 481 ntBASIC0.67□□□□□ -2.3
RAB5AP20339 AC010598.1-201ENST00000510378 103 ntBASIC0.67□□□□□ -2.3
RAB5AP20339 SEPT14P4-201ENST00000513445 186 ntBASIC0.67□□□□□ -2.3
RAB5AP20339 AC097462.1-201ENST00000514125 324 ntBASIC0.67□□□□□ -2.3
RAB5AP20339 RNU7-172P-201ENST00000517125 64 ntBASIC0.67□□□□□ -2.3
RAB5AP20339 FO082796.1-201ENST00000523795 183 ntBASIC0.67□□□□□ -2.3
RAB5AP20339 AP002001.1-203ENST00000534002 267 ntBASIC0.67□□□□□ -2.3
RAB5AP20339 AL357312.1-201ENST00000603879 298 ntBASIC0.67□□□□□ -2.3
RAB5AP20339 AC019193.3-201ENST00000609144 554 ntBASIC0.67□□□□□ -2.3
RAB5AP20339 AL359880.1-201ENST00000621879 266 ntBASIC0.67□□□□□ -2.3
RAB5AP20339 AC006435.5-201ENST00000624486 112 ntBASIC0.67□□□□□ -2.3
RAB5AP20339 RNU6-780P-201ENST00000391030 104 ntBASIC0.66□□□□□ -2.3
RAB5AP20339 RPS3AP1-201ENST00000413190 320 ntBASIC0.66□□□□□ -2.3
RAB5AP20339 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC0.66□□□□□ -2.3
RAB5AP20339 AC104332.1-201ENST00000440471 797 ntBASIC0.66□□□□□ -2.3
RAB5AP20339 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC0.66□□□□□ -2.3
RAB5AP20339 AC091021.1-201ENST00000468051 388 ntBASIC0.66□□□□□ -2.3
RAB5AP20339 RNU7-12P-201ENST00000516030 62 ntBASIC0.66□□□□□ -2.3
RAB5AP20339 RNU6-351P-201ENST00000516097 100 ntBASIC0.66□□□□□ -2.3
RAB5AP20339 RNU6-405P-201ENST00000516637 110 ntBASIC0.66□□□□□ -2.3
RAB5AP20339 RNU2-56P-201ENST00000516826 190 ntBASIC0.66□□□□□ -2.3
RAB5AP20339 Y_RNA.704-201ENST00000516851 102 ntBASIC0.66□□□□□ -2.3
RAB5AP20339 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.66□□□□□ -2.3
RAB5AP20339 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.66□□□□□ -2.3
RAB5AP20339 AC010620.1-201ENST00000601088 1102 ntBASIC0.66□□□□□ -2.3
RAB5AP20339 AC010999.1-201ENST00000611856 324 ntBASIC0.66□□□□□ -2.3
RAB5AP20339 RNU5F-3P-201ENST00000363767 117 ntBASIC0.65□□□□□ -2.31
RAB5AP20339 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.65□□□□□ -2.31
RAB5AP20339 MIR605-201ENST00000385078 83 ntBASIC0.65□□□□□ -2.31
RAB5AP20339 SNORA17.3-201ENST00000391159 129 ntBASIC0.65□□□□□ -2.31
RAB5AP20339 RNU2-66P-201ENST00000410650 161 ntBASIC0.65□□□□□ -2.31
RAB5AP20339 MTCO3P19-201ENST00000415864 321 ntBASIC0.65□□□□□ -2.31
RAB5AP20339 AL591806.2-201ENST00000433122 173 ntBASIC0.65□□□□□ -2.31
RAB5AP20339 MTATP6P13-201ENST00000438531 667 ntBASIC0.65□□□□□ -2.31
RAB5AP20339 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.65□□□□□ -2.31
RAB5AP20339 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC0.65□□□□□ -2.31
RAB5AP20339 AC010486.3-201ENST00000511602 785 ntBASIC0.65□□□□□ -2.31
RAB5AP20339 RNU6-1281P-201ENST00000516223 105 ntBASIC0.65□□□□□ -2.31
RAB5AP20339 AC136628.3-201ENST00000521868 290 ntBASIC0.65□□□□□ -2.31
RAB5AP20339 AC134698.4-201ENST00000523451 826 ntBASIC0.65□□□□□ -2.31
RAB5AP20339 RPL21P9-201ENST00000556149 474 ntBASIC0.65□□□□□ -2.31
RAB5AP20339 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC0.65□□□□□ -2.31
RAB5AP20339 AL117336.2-201ENST00000602435 335 ntBASIC0.65□□□□□ -2.31
RAB5AP20339 AC124303.1-201ENST00000605703 360 ntBASIC0.65□□□□□ -2.31
RAB5AP20339 DISC2.1-201ENST00000612827 205 ntBASIC0.65□□□□□ -2.31
RAB5AP20339 AC106800.4-201ENST00000614905 153 ntBASIC0.65□□□□□ -2.31
RAB5AP20339 AC068137.4-201ENST00000638485 296 ntBASIC0.65□□□□□ -2.31
RAB5AP20339 SNORA1B-201ENST00000362535 133 ntBASIC0.64□□□□□ -2.31
RAB5AP20339 RNU6-483P-201ENST00000384088 108 ntBASIC0.64□□□□□ -2.31
RAB5AP20339 SNORA20B-201ENST00000384220 132 ntBASIC0.64□□□□□ -2.31
RAB5AP20339 SNORA75.2-201ENST00000391138 150 ntBASIC0.64□□□□□ -2.31
RAB5AP20339 SNORA75.3-201ENST00000391231 150 ntBASIC0.64□□□□□ -2.31
RAB5AP20339 AL606490.4-201ENST00000423117 127 ntBASIC0.64□□□□□ -2.31
RAB5AP20339 RNU7-95P-201ENST00000459222 64 ntBASIC0.64□□□□□ -2.31
RAB5AP20339 RNU7-21P-201ENST00000459430 62 ntBASIC0.64□□□□□ -2.31
RAB5AP20339 RNU7-66P-201ENST00000459469 62 ntBASIC0.64□□□□□ -2.31
RAB5AP20339 HMGN2P26-201ENST00000463169 339 ntBASIC0.64□□□□□ -2.31
RAB5AP20339 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC0.64□□□□□ -2.31
RAB5AP20339 TRBVA-201ENST00000498804 316 ntBASIC0.64□□□□□ -2.31
RAB5AP20339 RNU6-256P-201ENST00000516747 97 ntBASIC0.64□□□□□ -2.31
RAB5AP20339 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.64□□□□□ -2.31
RAB5AP20339 MIR5696-201ENST00000578474 85 ntBASIC0.64□□□□□ -2.31
RAB5AP20339 MIR3672-201ENST00000584290 82 ntBASIC0.64□□□□□ -2.31
RAB5AP20339 MIR4653-201ENST00000585107 83 ntBASIC0.64□□□□□ -2.31
RAB5AP20339 7SK.7-201ENST00000603504 247 ntBASIC0.64□□□□□ -2.31
RAB5AP20339 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC0.64□□□□□ -2.31
RAB5AP20339 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC0.63□□□□□ -2.31
RAB5AP20339 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.63□□□□□ -2.31
RAB5AP20339 HSBP1P2-201ENST00000299671 229 ntBASIC0.63□□□□□ -2.31
RAB5AP20339 RNA5SP361-201ENST00000362686 118 ntBASIC0.63□□□□□ -2.31
RAB5AP20339 Y_RNA.405-201ENST00000383979 100 ntBASIC0.63□□□□□ -2.31
RAB5AP20339 Y_RNA.451-201ENST00000384200 100 ntBASIC0.63□□□□□ -2.31
RAB5AP20339 Y_RNA.524-201ENST00000384564 100 ntBASIC0.63□□□□□ -2.31
RAB5AP20339 Y_RNA.533-201ENST00000384596 114 ntBASIC0.63□□□□□ -2.31
RAB5AP20339 Y_RNA.561-201ENST00000384694 100 ntBASIC0.63□□□□□ -2.31
RAB5AP20339 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC0.63□□□□□ -2.31
RAB5AP20339 AC243428.1-201ENST00000421099 264 ntBASIC0.63□□□□□ -2.31
RAB5AP20339 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC0.63□□□□□ -2.31
RAB5AP20339 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC0.63□□□□□ -2.31
RAB5AP20339 AC018710.1-201ENST00000506509 158 ntBASIC0.63□□□□□ -2.31
RAB5AP20339 RNU7-175P-201ENST00000515915 61 ntBASIC0.63□□□□□ -2.31
RAB5AP20339 Y_RNA.683-201ENST00000516508 93 ntBASIC0.63□□□□□ -2.31
RAB5AP20339 RNU7-28P-201ENST00000516759 62 ntBASIC0.63□□□□□ -2.31
RAB5AP20339 RNU6-341P-201ENST00000516973 96 ntBASIC0.63□□□□□ -2.31
RAB5AP20339 CBX3P8-201ENST00000532412 525 ntBASIC0.63□□□□□ -2.31
RAB5AP20339 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC0.63□□□□□ -2.31
RAB5AP20339 AC091178.2-201ENST00000584401 117 ntBASIC0.63□□□□□ -2.31
RAB5AP20339 AL162413.1-201ENST00000603198 110 ntBASIC0.63□□□□□ -2.31
RAB5AP20339 PRELID3BP2-201ENST00000605362 201 ntBASIC0.63□□□□□ -2.31
RAB5AP20339 AC092954.2-201ENST00000609103 430 ntBASIC0.63□□□□□ -2.31
RAB5AP20339 Z99129.1-201ENST00000612510 255 ntBASIC0.63□□□□□ -2.31
RAB5AP20339 AC023934.1-201ENST00000574529 2389 ntBASIC0.62□□□□□ -2.31
RAB5AP20339 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
RAB5AP20339 MIRLET7C-201ENST00000362160 84 ntBASIC0.62□□□□□ -2.31
RAB5AP20339 Y_RNA.135-201ENST00000363439 95 ntBASIC0.62□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 123.9 ms