Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 AL121579.1-201ENST00000555129 305 ntBASIC0.71□□□□□ -2.3
RAB4AP20338 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC0.71□□□□□ -2.3
RAB4AP20338 AC010999.1-201ENST00000611856 324 ntBASIC0.71□□□□□ -2.3
RAB4AP20338 AC106800.4-201ENST00000614905 153 ntBASIC0.71□□□□□ -2.3
RAB4AP20338 AC005858.4-201ENST00000623191 700 ntBASIC0.71□□□□□ -2.3
RAB4AP20338 HSBP1P2-201ENST00000299671 229 ntBASIC0.7□□□□□ -2.3
RAB4AP20338 RNU4-38P-201ENST00000364472 129 ntBASIC0.7□□□□□ -2.3
RAB4AP20338 Y_RNA.363-201ENST00000365529 113 ntBASIC0.7□□□□□ -2.3
RAB4AP20338 RNU6-780P-201ENST00000391030 104 ntBASIC0.7□□□□□ -2.3
RAB4AP20338 U8.16-201ENST00000391279 133 ntBASIC0.7□□□□□ -2.3
RAB4AP20338 AF228730.1-201ENST00000397972 663 ntBASIC0.7□□□□□ -2.3
RAB4AP20338 AC243428.1-201ENST00000421099 264 ntBASIC0.7□□□□□ -2.3
RAB4AP20338 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.7□□□□□ -2.3
RAB4AP20338 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC0.7□□□□□ -2.3
RAB4AP20338 Y_RNA.683-201ENST00000516508 93 ntBASIC0.7□□□□□ -2.3
RAB4AP20338 RNU7-28P-201ENST00000516759 62 ntBASIC0.7□□□□□ -2.3
RAB4AP20338 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.7□□□□□ -2.3
RAB4AP20338 AC090142.3-201ENST00000519012 385 ntBASIC0.7□□□□□ -2.3
RAB4AP20338 MIR5696-201ENST00000578474 85 ntBASIC0.7□□□□□ -2.3
RAB4AP20338 AC025811.1-201ENST00000604312 472 ntBASIC0.7□□□□□ -2.3
RAB4AP20338 AL512598.1-201ENST00000610158 273 ntBASIC0.7□□□□□ -2.3
RAB4AP20338 Z99129.1-201ENST00000612510 255 ntBASIC0.7□□□□□ -2.3
RAB4AP20338 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC0.7□□□□□ -2.3
RAB4AP20338 SNORA7.1-201ENST00000363750 139 ntBASIC0.69□□□□□ -2.3
RAB4AP20338 SNORD114-2-201ENST00000363953 78 ntBASIC0.69□□□□□ -2.3
RAB4AP20338 SNORD116-9-201ENST00000384000 95 ntBASIC0.69□□□□□ -2.3
RAB4AP20338 RNU6-483P-201ENST00000384088 108 ntBASIC0.69□□□□□ -2.3
RAB4AP20338 SNORD116-3-201ENST00000384287 95 ntBASIC0.69□□□□□ -2.3
RAB4AP20338 SNORD116-7-201ENST00000384404 95 ntBASIC0.69□□□□□ -2.3
RAB4AP20338 SNORD116-5-201ENST00000384462 95 ntBASIC0.69□□□□□ -2.3
RAB4AP20338 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC0.69□□□□□ -2.3
RAB4AP20338 MIR942-201ENST00000401111 86 ntBASIC0.69□□□□□ -2.3
RAB4AP20338 RNU6-908P-201ENST00000410160 94 ntBASIC0.69□□□□□ -2.3
RAB4AP20338 MTCO2P7-201ENST00000446518 666 ntBASIC0.69□□□□□ -2.3
RAB4AP20338 OR9P1P-201ENST00000496431 281 ntBASIC0.69□□□□□ -2.3
RAB4AP20338 AC019235.1-201ENST00000503847 207 ntBASIC0.69□□□□□ -2.3
RAB4AP20338 AC022493.2-201ENST00000506122 481 ntBASIC0.69□□□□□ -2.3
RAB4AP20338 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC0.69□□□□□ -2.3
RAB4AP20338 NBR2-204ENST00000587322 63 ntBASIC0.69□□□□□ -2.3
RAB4AP20338 AC092954.2-201ENST00000609103 430 ntBASIC0.69□□□□□ -2.3
RAB4AP20338 AL353770.2-201ENST00000620024 78 ntBASIC0.69□□□□□ -2.3
RAB4AP20338 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.69□□□□□ -2.3
RAB4AP20338 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC0.69□□□□□ -2.3
RAB4AP20338 Y_RNA.212-201ENST00000364177 102 ntBASIC0.68□□□□□ -2.3
RAB4AP20338 Y_RNA.256-201ENST00000364594 104 ntBASIC0.68□□□□□ -2.3
RAB4AP20338 Y_RNA.267-201ENST00000364679 109 ntBASIC0.68□□□□□ -2.3
RAB4AP20338 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.68□□□□□ -2.3
RAB4AP20338 Y_RNA.500-201ENST00000384466 111 ntBASIC0.68□□□□□ -2.3
RAB4AP20338 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC0.68□□□□□ -2.3
RAB4AP20338 MIR1289-2-201ENST00000408360 111 ntBASIC0.68□□□□□ -2.3
RAB4AP20338 RPS3AP1-201ENST00000413190 320 ntBASIC0.68□□□□□ -2.3
RAB4AP20338 AC114482.1-201ENST00000418010 247 ntBASIC0.68□□□□□ -2.3
RAB4AP20338 USMG5P1-201ENST00000425964 177 ntBASIC0.68□□□□□ -2.3
RAB4AP20338 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC0.68□□□□□ -2.3
RAB4AP20338 AC093850.1-201ENST00000454121 251 ntBASIC0.68□□□□□ -2.3
RAB4AP20338 AC091021.1-201ENST00000468051 388 ntBASIC0.68□□□□□ -2.3
RAB4AP20338 RNU6-1114P-201ENST00000516022 107 ntBASIC0.68□□□□□ -2.3
RAB4AP20338 RNU7-12P-201ENST00000516030 62 ntBASIC0.68□□□□□ -2.3
RAB4AP20338 Y_RNA.688-201ENST00000516565 95 ntBASIC0.68□□□□□ -2.3
RAB4AP20338 RNU6-197P-201ENST00000516680 100 ntBASIC0.68□□□□□ -2.3
RAB4AP20338 AC136628.3-201ENST00000521868 290 ntBASIC0.68□□□□□ -2.3
RAB4AP20338 AP002004.2-201ENST00000531656 154 ntBASIC0.68□□□□□ -2.3
RAB4AP20338 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC0.68□□□□□ -2.3
RAB4AP20338 MIR3672-201ENST00000584290 82 ntBASIC0.68□□□□□ -2.3
RAB4AP20338 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.68□□□□□ -2.3
RAB4AP20338 AC245008.1-201ENST00000608123 476 ntBASIC0.68□□□□□ -2.3
RAB4AP20338 RNY3P3-201ENST00000363816 102 ntBASIC0.67□□□□□ -2.3
RAB4AP20338 RNU6-969P-201ENST00000383900 105 ntBASIC0.67□□□□□ -2.3
RAB4AP20338 Y_RNA.414-201ENST00000384011 101 ntBASIC0.67□□□□□ -2.3
RAB4AP20338 SNORA20B-201ENST00000384220 132 ntBASIC0.67□□□□□ -2.3
RAB4AP20338 RNU6-306P-201ENST00000384617 107 ntBASIC0.67□□□□□ -2.3
RAB4AP20338 RNU6-376P-201ENST00000384731 106 ntBASIC0.67□□□□□ -2.3
RAB4AP20338 RNA5SP482-201ENST00000391269 118 ntBASIC0.67□□□□□ -2.3
RAB4AP20338 USP9YP16-201ENST00000430287 407 ntBASIC0.67□□□□□ -2.3
RAB4AP20338 MTATP6P17-201ENST00000431030 672 ntBASIC0.67□□□□□ -2.3
RAB4AP20338 MTND3P23-201ENST00000431980 347 ntBASIC0.67□□□□□ -2.3
RAB4AP20338 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC0.67□□□□□ -2.3
RAB4AP20338 AC104332.1-201ENST00000440471 797 ntBASIC0.67□□□□□ -2.3
RAB4AP20338 AC009474.2-201ENST00000451383 136 ntBASIC0.67□□□□□ -2.3
RAB4AP20338 USP9YP23-201ENST00000455085 407 ntBASIC0.67□□□□□ -2.3
RAB4AP20338 LINC01399-202ENST00000458450 244 ntBASIC0.67□□□□□ -2.3
RAB4AP20338 snoU13.15-201ENST00000459407 104 ntBASIC0.67□□□□□ -2.3
RAB4AP20338 AC087343.1-201ENST00000477341 475 ntBASIC0.67□□□□□ -2.3
RAB4AP20338 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC0.67□□□□□ -2.3
RAB4AP20338 AC018710.1-201ENST00000506509 158 ntBASIC0.67□□□□□ -2.3
RAB4AP20338 RNU6-341P-201ENST00000516973 96 ntBASIC0.67□□□□□ -2.3
RAB4AP20338 AP002001.1-203ENST00000534002 267 ntBASIC0.67□□□□□ -2.3
RAB4AP20338 MIR3684-201ENST00000579779 74 ntBASIC0.67□□□□□ -2.3
RAB4AP20338 MIR4273-201ENST00000582824 84 ntBASIC0.67□□□□□ -2.3
RAB4AP20338 ZNF299P-201ENST00000406845 1804 ntBASIC0.66□□□□□ -2.3
RAB4AP20338 SNORA1B-201ENST00000362535 133 ntBASIC0.66□□□□□ -2.3
RAB4AP20338 RNU6-451P-201ENST00000362921 107 ntBASIC0.66□□□□□ -2.3
RAB4AP20338 RNU6-407P-201ENST00000365280 104 ntBASIC0.66□□□□□ -2.3
RAB4AP20338 Y_RNA.405-201ENST00000383979 100 ntBASIC0.66□□□□□ -2.3
RAB4AP20338 Y_RNA.451-201ENST00000384200 100 ntBASIC0.66□□□□□ -2.3
RAB4AP20338 Y_RNA.490-201ENST00000384413 102 ntBASIC0.66□□□□□ -2.3
RAB4AP20338 Y_RNA.524-201ENST00000384564 100 ntBASIC0.66□□□□□ -2.3
RAB4AP20338 Y_RNA.533-201ENST00000384596 114 ntBASIC0.66□□□□□ -2.3
RAB4AP20338 Y_RNA.561-201ENST00000384694 100 ntBASIC0.66□□□□□ -2.3
RAB4AP20338 MIR608-201ENST00000384820 100 ntBASIC0.66□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 122.3 ms