| CPA3 | P15088 | AL359075.3-201 | ENST00000613288 | 217 nt | BASIC | 1.45 | □□□□□ -2.18 | | |
| CPA3 | P15088 | U6.73-201 | ENST00000619194 | 103 nt | BASIC | 1.45 | □□□□□ -2.18 | | |
| CPA3 | P15088 | OR4C11-202 | ENST00000641580 | 2737 nt | APPRIS P1 BASIC | 1.45 | □□□□□ -2.18 | | |
| CPA3 | P15088 | CEP57L1-201 | ENST00000359793 | 2515 nt | APPRIS P3 TSL 1 (best) BASIC | 1.44 | □□□□□ -2.18 | | |
| CPA3 | P15088 | RNU6-1145P-201 | ENST00000384246 | 107 nt | BASIC | 1.44 | □□□□□ -2.18 | | |
| CPA3 | P15088 | Y_RNA.557-201 | ENST00000384680 | 107 nt | BASIC | 1.44 | □□□□□ -2.18 | | |
| CPA3 | P15088 | RNA5SP323-201 | ENST00000391094 | 133 nt | BASIC | 1.44 | □□□□□ -2.18 | | |
| CPA3 | P15088 | FGF7P8-201 | ENST00000402994 | 292 nt | BASIC | 1.44 | □□□□□ -2.18 | | |
| CPA3 | P15088 | MIR1289-2-201 | ENST00000408360 | 111 nt | BASIC | 1.44 | □□□□□ -2.18 | | |
| CPA3 | P15088 | ELOCP21-201 | ENST00000412558 | 336 nt | BASIC | 1.44 | □□□□□ -2.18 | | |
| CPA3 | P15088 | AL356010.2-201 | ENST00000422844 | 197 nt | TSL 3 BASIC | 1.44 | □□□□□ -2.18 | | |
| CPA3 | P15088 | MTCYBP10-201 | ENST00000424905 | 650 nt | BASIC | 1.44 | □□□□□ -2.18 | | |
| CPA3 | P15088 | RPS27P16-201 | ENST00000425758 | 201 nt | BASIC | 1.44 | □□□□□ -2.18 | | |
| CPA3 | P15088 | SDAD1P3-201 | ENST00000427380 | 333 nt | BASIC | 1.44 | □□□□□ -2.18 | | |
| CPA3 | P15088 | MTND4P17-201 | ENST00000470444 | 350 nt | BASIC | 1.44 | □□□□□ -2.18 | | |
| CPA3 | P15088 | RNA5SP445-201 | ENST00000515889 | 115 nt | BASIC | 1.44 | □□□□□ -2.18 | | |
| CPA3 | P15088 | SCARNA16.2-201 | ENST00000516520 | 172 nt | BASIC | 1.44 | □□□□□ -2.18 | | |
| CPA3 | P15088 | RNU1-142P-201 | ENST00000516682 | 145 nt | BASIC | 1.44 | □□□□□ -2.18 | | |
| CPA3 | P15088 | RNU6-548P-201 | ENST00000517083 | 115 nt | BASIC | 1.44 | □□□□□ -2.18 | | |
| CPA3 | P15088 | AC016885.2-201 | ENST00000522598 | 261 nt | TSL 3 BASIC | 1.44 | □□□□□ -2.18 | | |
| CPA3 | P15088 | AP000755.2-201 | ENST00000526777 | 571 nt | TSL 5 BASIC | 1.44 | □□□□□ -2.18 | | |
| CPA3 | P15088 | AL442163.3-201 | ENST00000554110 | 156 nt | BASIC | 1.44 | □□□□□ -2.18 | | |
| CPA3 | P15088 | AC008269.2-201 | ENST00000561915 | 1105 nt | BASIC | 1.44 | □□□□□ -2.18 | | |
| CPA3 | P15088 | AC090617.3-201 | ENST00000573670 | 475 nt | BASIC | 1.44 | □□□□□ -2.18 | | |
| CPA3 | P15088 | MIR4709-201 | ENST00000577272 | 72 nt | BASIC | 1.44 | □□□□□ -2.18 | | |
| CPA3 | P15088 | MIR8063-201 | ENST00000621930 | 81 nt | BASIC | 1.44 | □□□□□ -2.18 | | |
| CPA3 | P15088 | RNA5SP361-201 | ENST00000362686 | 118 nt | BASIC | 1.43 | □□□□□ -2.18 | | |
| CPA3 | P15088 | Y_RNA.67-201 | ENST00000362870 | 100 nt | BASIC | 1.43 | □□□□□ -2.18 | | |
| CPA3 | P15088 | RNU6ATAC2P-201 | ENST00000387943 | 126 nt | BASIC | 1.43 | □□□□□ -2.18 | | |
| CPA3 | P15088 | RNU6-700P-201 | ENST00000391043 | 107 nt | BASIC | 1.43 | □□□□□ -2.18 | | |
| CPA3 | P15088 | SNORA75.4-201 | ENST00000391278 | 119 nt | BASIC | 1.43 | □□□□□ -2.18 | | |
| CPA3 | P15088 | AC004965.1-201 | ENST00000413033 | 213 nt | BASIC | 1.43 | □□□□□ -2.18 | | |
| CPA3 | P15088 | AC027119.1-201 | ENST00000440877 | 241 nt | BASIC | 1.43 | □□□□□ -2.18 | | |
| CPA3 | P15088 | AC245517.4-201 | ENST00000448601 | 281 nt | BASIC | 1.43 | □□□□□ -2.18 | | |
| CPA3 | P15088 | RPS29P23-201 | ENST00000458635 | 123 nt | BASIC | 1.43 | □□□□□ -2.18 | | |
| CPA3 | P15088 | RNA5SP61-201 | ENST00000516453 | 100 nt | BASIC | 1.43 | □□□□□ -2.18 | | |
| CPA3 | P15088 | RNU6-1213P-201 | ENST00000517075 | 94 nt | BASIC | 1.43 | □□□□□ -2.18 | | |
| CPA3 | P15088 | MDM2-232 | ENST00000544561 | 213 nt | TSL 5 BASIC | 1.43 | □□□□□ -2.18 | | |
| CPA3 | P15088 | AC092138.2-201 | ENST00000563811 | 428 nt | TSL 5 BASIC | 1.43 | □□□□□ -2.18 | | |
| CPA3 | P15088 | MIR3683-201 | ENST00000580847 | 82 nt | BASIC | 1.43 | □□□□□ -2.18 | | |
| CPA3 | P15088 | AL929325.1-201 | ENST00000603096 | 117 nt | BASIC | 1.43 | □□□□□ -2.18 | | |
| CPA3 | P15088 | AL390123.1-201 | ENST00000603216 | 237 nt | BASIC | 1.43 | □□□□□ -2.18 | | |
| CPA3 | P15088 | CENPF-206 | ENST00000614578 | 528 nt | TSL 5 BASIC | 1.43 | □□□□□ -2.18 | | |
| CPA3 | P15088 | ZNF260-203 | ENST00000588993 | 4174 nt | APPRIS P1 TSL 1 (best) BASIC | 1.43 | □□□□□ -2.18 | | |
| CPA3 | P15088 | SNORD81.2-201 | ENST00000365153 | 76 nt | BASIC | 1.42 | □□□□□ -2.18 | | |
| CPA3 | P15088 | SNORA12.1-201 | ENST00000390873 | 148 nt | BASIC | 1.42 | □□□□□ -2.18 | | |
| CPA3 | P15088 | COX6CP10-201 | ENST00000416832 | 224 nt | BASIC | 1.42 | □□□□□ -2.18 | | |
| CPA3 | P15088 | AC010154.1-201 | ENST00000425857 | 269 nt | BASIC | 1.42 | □□□□□ -2.18 | | |
| CPA3 | P15088 | AL354695.1-201 | ENST00000427935 | 228 nt | BASIC | 1.42 | □□□□□ -2.18 | | |
| CPA3 | P15088 | TOMM22P2-201 | ENST00000430735 | 237 nt | BASIC | 1.42 | □□□□□ -2.18 | | |
| CPA3 | P15088 | AL513185.1-201 | ENST00000431638 | 162 nt | TSL 5 BASIC | 1.42 | □□□□□ -2.18 | | |
| CPA3 | P15088 | AC003988.1-201 | ENST00000447198 | 578 nt | TSL 5 BASIC | 1.42 | □□□□□ -2.18 | | |
| CPA3 | P15088 | AC093893.1-201 | ENST00000505781 | 510 nt | TSL 5 BASIC | 1.42 | □□□□□ -2.18 | | |
| CPA3 | P15088 | AC096721.1-201 | ENST00000513540 | 552 nt | TSL 4 BASIC | 1.42 | □□□□□ -2.18 | | |
| CPA3 | P15088 | RNU6-902P-201 | ENST00000517212 | 91 nt | BASIC | 1.42 | □□□□□ -2.18 | | |
| CPA3 | P15088 | AL137100.2-201 | ENST00000555786 | 315 nt | BASIC | 1.42 | □□□□□ -2.18 | | |
| CPA3 | P15088 | AC025887.1-201 | ENST00000578349 | 264 nt | TSL 3 BASIC | 1.42 | □□□□□ -2.18 | | |
| CPA3 | P15088 | AC022306.2-201 | ENST00000617563 | 647 nt | BASIC | 1.42 | □□□□□ -2.18 | | |
| CPA3 | P15088 | FABP12-201 | ENST00000360464 | 551 nt | APPRIS P1 TSL 1 (best) BASIC | 1.41 | □□□□□ -2.18 | | |
| CPA3 | P15088 | RNU6-318P-201 | ENST00000384283 | 103 nt | BASIC | 1.41 | □□□□□ -2.18 | | |
| CPA3 | P15088 | RNU6-876P-201 | ENST00000391295 | 104 nt | BASIC | 1.41 | □□□□□ -2.18 | | |
| CPA3 | P15088 | SNORA26.9-201 | ENST00000391322 | 122 nt | BASIC | 1.41 | □□□□□ -2.18 | | |
| CPA3 | P15088 | AL355796.1-201 | ENST00000406706 | 323 nt | BASIC | 1.41 | □□□□□ -2.18 | | |
| CPA3 | P15088 | RNU6-1186P-201 | ENST00000410429 | 97 nt | BASIC | 1.41 | □□□□□ -2.18 | | |
| CPA3 | P15088 | RNU7-87P-201 | ENST00000459343 | 62 nt | BASIC | 1.41 | □□□□□ -2.18 | | |
| CPA3 | P15088 | AC108210.2-201 | ENST00000503681 | 201 nt | BASIC | 1.41 | □□□□□ -2.18 | | |
| CPA3 | P15088 | RNU7-99P-201 | ENST00000516271 | 62 nt | BASIC | 1.41 | □□□□□ -2.18 | | |
| CPA3 | P15088 | AP002001.1-203 | ENST00000534002 | 267 nt | BASIC | 1.41 | □□□□□ -2.18 | | |
| CPA3 | P15088 | LINC02293-201 | ENST00000548335 | 574 nt | TSL 5 BASIC | 1.41 | □□□□□ -2.18 | | |
| CPA3 | P15088 | AC096558.1-203 | ENST00000550516 | 574 nt | TSL 3 BASIC | 1.41 | □□□□□ -2.18 | | |
| CPA3 | P15088 | AC005668.1-201 | ENST00000571142 | 476 nt | BASIC | 1.41 | □□□□□ -2.18 | | |
| CPA3 | P15088 | AC090398.1-202 | ENST00000580403 | 457 nt | TSL 2 BASIC | 1.41 | □□□□□ -2.18 | | |
| CPA3 | P15088 | AC021506.2-201 | ENST00000612354 | 169 nt | BASIC | 1.41 | □□□□□ -2.18 | | |
| CPA3 | P15088 | AL359757.2-201 | ENST00000624309 | 274 nt | BASIC | 1.41 | □□□□□ -2.18 | | |
| CPA3 | P15088 | AL669831.3-213 | ENST00000636676 | 183 nt | BASIC | 1.41 | □□□□□ -2.18 | | |
| CPA3 | P15088 | SNORA67.6-201 | ENST00000391093 | 99 nt | BASIC | 1.4 | □□□□□ -2.19 | | |
| CPA3 | P15088 | Y_RNA.595-201 | ENST00000410403 | 105 nt | BASIC | 1.4 | □□□□□ -2.19 | | |
| CPA3 | P15088 | AL136985.1-201 | ENST00000424592 | 395 nt | TSL 3 BASIC | 1.4 | □□□□□ -2.19 | | |
| CPA3 | P15088 | AL591806.2-201 | ENST00000433122 | 173 nt | BASIC | 1.4 | □□□□□ -2.19 | | |
| CPA3 | P15088 | AC015922.2-201 | ENST00000435593 | 184 nt | BASIC | 1.4 | □□□□□ -2.19 | | |
| CPA3 | P15088 | RBMX2P4-201 | ENST00000441256 | 376 nt | BASIC | 1.4 | □□□□□ -2.19 | | |
| CPA3 | P15088 | SNRPGP13-201 | ENST00000442212 | 177 nt | BASIC | 1.4 | □□□□□ -2.19 | | |
| CPA3 | P15088 | snoU13.23-201 | ENST00000458863 | 104 nt | BASIC | 1.4 | □□□□□ -2.19 | | |
| CPA3 | P15088 | RNU7-34P-201 | ENST00000459394 | 64 nt | BASIC | 1.4 | □□□□□ -2.19 | | |
| CPA3 | P15088 | RNU6-120P-201 | ENST00000516077 | 103 nt | BASIC | 1.4 | □□□□□ -2.19 | | |
| CPA3 | P15088 | RNU6-107P-201 | ENST00000516643 | 102 nt | BASIC | 1.4 | □□□□□ -2.19 | | |
| CPA3 | P15088 | AC019176.1-201 | ENST00000518519 | 225 nt | BASIC | 1.4 | □□□□□ -2.19 | | |
| CPA3 | P15088 | AP003033.1-201 | ENST00000527244 | 415 nt | BASIC | 1.4 | □□□□□ -2.19 | | |
| CPA3 | P15088 | AC004584.2-201 | ENST00000570407 | 410 nt | BASIC | 1.4 | □□□□□ -2.19 | | |
| CPA3 | P15088 | SNORD53B-201 | ENST00000577887 | 78 nt | BASIC | 1.4 | □□□□□ -2.19 | | |
| CPA3 | P15088 | MIR4524B-201 | ENST00000581569 | 115 nt | BASIC | 1.4 | □□□□□ -2.19 | | |
| CPA3 | P15088 | AC016727.1-205 | ENST00000605437 | 569 nt | BASIC | 1.4 | □□□□□ -2.19 | | |
| CPA3 | P15088 | AC092794.2-201 | ENST00000620933 | 563 nt | BASIC | 1.4 | □□□□□ -2.19 | | |
| CPA3 | P15088 | HS1BP3-208 | ENST00000631166 | 78 nt | TSL 5 BASIC | 1.4 | □□□□□ -2.19 | | |
| CPA3 | P15088 | AC099654.5-201 | ENST00000636479 | 350 nt | BASIC | 1.4 | □□□□□ -2.19 | | |
| CPA3 | P15088 | RNU6-1266P-201 | ENST00000362794 | 105 nt | BASIC | 1.39 | □□□□□ -2.19 | | |
| CPA3 | P15088 | U8.1-201 | ENST00000362843 | 134 nt | BASIC | 1.39 | □□□□□ -2.19 | | |
| CPA3 | P15088 | Y_RNA.358-201 | ENST00000365491 | 99 nt | BASIC | 1.39 | □□□□□ -2.19 | | |
| CPA3 | P15088 | MRPL35P1-201 | ENST00000404272 | 572 nt | BASIC | 1.39 | □□□□□ -2.19 | | |
| CPA3 | P15088 | AC018511.2-201 | ENST00000413431 | 189 nt | TSL 3 BASIC | 1.39 | □□□□□ -2.19 | | |