Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 AL159153.1-201ENST00000619688 317 ntBASIC-2.22□□□□□ -2.76
TOP2AP11388 AL356094.1-201ENST00000624663 1212 ntBASIC-2.22□□□□□ -2.76
TOP2AP11388 Y_RNA.228-201ENST00000364346 98 ntBASIC-2.22□□□□□ -2.77
TOP2AP11388 SNORA67.2-201ENST00000384300 149 ntBASIC-2.22□□□□□ -2.77
TOP2AP11388 AC245047.3-201ENST00000429428 127 ntBASIC-2.22□□□□□ -2.77
TOP2AP11388 snoU83B.1-201ENST00000517136 88 ntBASIC-2.22□□□□□ -2.77
TOP2AP11388 AC026616.1-201ENST00000523157 525 ntBASIC-2.22□□□□□ -2.77
TOP2AP11388 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC-2.22□□□□□ -2.77
TOP2AP11388 AL359999.1-201ENST00000604513 294 ntBASIC-2.22□□□□□ -2.77
TOP2AP11388 MTND4P21-201ENST00000453886 1357 ntBASIC-2.23□□□□□ -2.77
TOP2AP11388 RNU6-424P-201ENST00000384367 105 ntBASIC-2.23□□□□□ -2.77
TOP2AP11388 AL355143.1-201ENST00000407101 841 ntBASIC-2.23□□□□□ -2.77
TOP2AP11388 AC068135.1-201ENST00000446164 246 ntBASIC-2.23□□□□□ -2.77
TOP2AP11388 FABP5P15-201ENST00000453566 214 ntBASIC-2.23□□□□□ -2.77
TOP2AP11388 AL136221.1-201ENST00000621449 509 ntBASIC-2.23□□□□□ -2.77
TOP2AP11388 snoU2-30.2-201ENST00000362805 70 ntBASIC-2.24□□□□□ -2.77
TOP2AP11388 RNU5E-10P-201ENST00000363506 118 ntBASIC-2.24□□□□□ -2.77
TOP2AP11388 RNA5SP390-201ENST00000410191 113 ntBASIC-2.24□□□□□ -2.77
TOP2AP11388 AC022137.1-201ENST00000483735 151 ntBASIC-2.24□□□□□ -2.77
TOP2AP11388 AC018448.1-201ENST00000552843 316 ntBASIC-2.24□□□□□ -2.77
TOP2AP11388 AC023158.1-201ENST00000561632 1025 ntBASIC-2.24□□□□□ -2.77
TOP2AP11388 TUG1_4.1-201ENST00000619464 181 ntBASIC-2.24□□□□□ -2.77
TOP2AP11388 Y_RNA.12-201ENST00000362393 112 ntBASIC-2.25□□□□□ -2.77
TOP2AP11388 RNU6-702P-201ENST00000364982 107 ntBASIC-2.25□□□□□ -2.77
TOP2AP11388 Y_RNA.497-201ENST00000384447 98 ntBASIC-2.25□□□□□ -2.77
TOP2AP11388 RNU6-417P-201ENST00000384712 107 ntBASIC-2.25□□□□□ -2.77
TOP2AP11388 CDK8P2-201ENST00000415020 547 ntBASIC-2.25□□□□□ -2.77
TOP2AP11388 MIR2115-201ENST00000516657 100 ntBASIC-2.25□□□□□ -2.77
TOP2AP11388 AL117336.2-201ENST00000602435 335 ntBASIC-2.25□□□□□ -2.77
TOP2AP11388 BX322639.1-202ENST00000423987 2213 ntBASIC-2.25□□□□□ -2.77
TOP2AP11388 SNORA1-201ENST00000384107 130 ntBASIC-2.26□□□□□ -2.77
TOP2AP11388 RNU6-901P-201ENST00000384593 106 ntBASIC-2.26□□□□□ -2.77
TOP2AP11388 MIR526A1-201ENST00000384897 85 ntBASIC-2.26□□□□□ -2.77
TOP2AP11388 MIR147A-201ENST00000385079 72 ntBASIC-2.26□□□□□ -2.77
TOP2AP11388 CALM2P2-201ENST00000428512 440 ntBASIC-2.26□□□□□ -2.77
TOP2AP11388 AC015724.1-201ENST00000478577 156 ntBASIC-2.26□□□□□ -2.77
TOP2AP11388 RNU6-1291P-201ENST00000516591 104 ntBASIC-2.26□□□□□ -2.77
TOP2AP11388 RNU1-142P-201ENST00000516682 145 ntBASIC-2.26□□□□□ -2.77
TOP2AP11388 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC-2.26□□□□□ -2.77
TOP2AP11388 ZNF971P-201ENST00000562068 1249 ntBASIC-2.26□□□□□ -2.77
TOP2AP11388 SNORD39.3-201ENST00000584451 71 ntBASIC-2.26□□□□□ -2.77
TOP2AP11388 AL161798.1-201ENST00000604630 131 ntBASIC-2.26□□□□□ -2.77
TOP2AP11388 MIR487A-201ENST00000385009 80 ntBASIC-2.27□□□□□ -2.77
TOP2AP11388 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC-2.27□□□□□ -2.77
TOP2AP11388 RNU7-14P-201ENST00000459331 62 ntBASIC-2.27□□□□□ -2.77
TOP2AP11388 snoU13.16-201ENST00000459350 104 ntBASIC-2.27□□□□□ -2.77
TOP2AP11388 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC-2.27□□□□□ -2.77
TOP2AP11388 RNU6-1146P-201ENST00000516282 102 ntBASIC-2.27□□□□□ -2.77
TOP2AP11388 SNORD92-201ENST00000585078 85 ntBASIC-2.27□□□□□ -2.77
TOP2AP11388 RNU6-188P-201ENST00000364207 107 ntBASIC-2.27□□□□□ -2.77
TOP2AP11388 RNU6-1229P-201ENST00000364295 107 ntBASIC-2.27□□□□□ -2.77
TOP2AP11388 Y_RNA.336-201ENST00000365307 109 ntBASIC-2.27□□□□□ -2.77
TOP2AP11388 SNORD115-44-201ENST00000365391 82 ntBASIC-2.27□□□□□ -2.77
TOP2AP11388 RNU6-880P-201ENST00000384526 107 ntBASIC-2.27□□□□□ -2.77
TOP2AP11388 U8.15-201ENST00000390947 134 ntBASIC-2.27□□□□□ -2.77
TOP2AP11388 RNU6-1300P-201ENST00000391046 108 ntBASIC-2.27□□□□□ -2.77
TOP2AP11388 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC-2.27□□□□□ -2.77
TOP2AP11388 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC-2.27□□□□□ -2.77
TOP2AP11388 RNU7-156P-201ENST00000517214 74 ntBASIC-2.27□□□□□ -2.77
TOP2AP11388 VN1R88P-201ENST00000596787 292 ntBASIC-2.27□□□□□ -2.77
TOP2AP11388 SNORA28-201ENST00000606769 126 ntBASIC-2.27□□□□□ -2.77
TOP2AP11388 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-2.27□□□□□ -2.77
TOP2AP11388 RNU5B-2P-201ENST00000363036 113 ntBASIC-2.28□□□□□ -2.77
TOP2AP11388 RNU6-25P-201ENST00000383873 107 ntBASIC-2.28□□□□□ -2.77
TOP2AP11388 RNU5A-6P-201ENST00000384136 116 ntBASIC-2.28□□□□□ -2.77
TOP2AP11388 RNU6-878P-201ENST00000384578 110 ntBASIC-2.28□□□□□ -2.77
TOP2AP11388 RNU6-29P-201ENST00000384637 107 ntBASIC-2.28□□□□□ -2.77
TOP2AP11388 SNORD28-201ENST00000384706 75 ntBASIC-2.28□□□□□ -2.77
TOP2AP11388 AL592310.1-201ENST00000414330 671 ntBASIC-2.28□□□□□ -2.77
TOP2AP11388 AC243428.1-201ENST00000421099 264 ntBASIC-2.28□□□□□ -2.77
TOP2AP11388 RNU6-927P-201ENST00000516199 100 ntBASIC-2.28□□□□□ -2.77
TOP2AP11388 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC-2.28□□□□□ -2.77
TOP2AP11388 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC-2.28□□□□□ -2.77
TOP2AP11388 AC008521.1-201ENST00000587471 187 ntBASIC-2.28□□□□□ -2.77
TOP2AP11388 AC132825.6-201ENST00000638861 357 ntBASIC-2.28□□□□□ -2.77
TOP2AP11388 Y_RNA.125-201ENST00000363371 111 ntBASIC-2.29□□□□□ -2.78
TOP2AP11388 RNU6-396P-201ENST00000365369 105 ntBASIC-2.29□□□□□ -2.78
TOP2AP11388 MIR125B2-201ENST00000385128 89 ntBASIC-2.29□□□□□ -2.78
TOP2AP11388 MIR516B1-201ENST00000385211 90 ntBASIC-2.29□□□□□ -2.78
TOP2AP11388 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC-2.29□□□□□ -2.78
TOP2AP11388 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC-2.29□□□□□ -2.78
TOP2AP11388 AL606517.1-201ENST00000446914 387 ntBASIC-2.29□□□□□ -2.78
TOP2AP11388 RNU6-983P-201ENST00000516004 103 ntBASIC-2.29□□□□□ -2.78
TOP2AP11388 AC016597.2-201ENST00000613256 341 ntBASIC-2.29□□□□□ -2.78
TOP2AP11388 MIR6129-201ENST00000616087 109 ntBASIC-2.29□□□□□ -2.78
TOP2AP11388 RNA5SP48-201ENST00000363969 126 ntBASIC-2.3□□□□□ -2.78
TOP2AP11388 Y_RNA.361-201ENST00000365515 120 ntBASIC-2.3□□□□□ -2.78
TOP2AP11388 SNORA22B-201ENST00000383876 138 ntBASIC-2.3□□□□□ -2.78
TOP2AP11388 AP000533.3-201ENST00000447704 118 ntBASIC-2.3□□□□□ -2.78
TOP2AP11388 HIGD1AP6-201ENST00000521833 279 ntBASIC-2.3□□□□□ -2.78
TOP2AP11388 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC-2.3□□□□□ -2.78
TOP2AP11388 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC-2.3□□□□□ -2.78
TOP2AP11388 AC010999.1-201ENST00000611856 324 ntBASIC-2.3□□□□□ -2.78
TOP2AP11388 Y_RNA.329-201ENST00000365209 107 ntBASIC-2.31□□□□□ -2.78
TOP2AP11388 SNORD56B-201ENST00000384713 71 ntBASIC-2.31□□□□□ -2.78
TOP2AP11388 RNU6-817P-201ENST00000391083 104 ntBASIC-2.31□□□□□ -2.78
TOP2AP11388 RNA5SP475-201ENST00000410568 110 ntBASIC-2.31□□□□□ -2.78
TOP2AP11388 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC-2.31□□□□□ -2.78
TOP2AP11388 AL031667.1-201ENST00000440222 725 ntBASIC-2.31□□□□□ -2.78
TOP2AP11388 AC244505.6-201ENST00000452829 130 ntBASIC-2.31□□□□□ -2.78
Retrieved 100 of 98,524 protein–RNA pairs in 114 ms