Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 MTND5P10-201ENST00000603719 1809 ntBASIC1.75□□□□□ -2.13
RAB40ALP0C0E4 RNU6-490P-201ENST00000362985 107 ntBASIC1.74□□□□□ -2.13
RAB40ALP0C0E4 RNU6-112P-201ENST00000363599 104 ntBASIC1.74□□□□□ -2.13
RAB40ALP0C0E4 RNU6-1019P-201ENST00000364424 107 ntBASIC1.74□□□□□ -2.13
RAB40ALP0C0E4 RNU6-1040P-201ENST00000383974 107 ntBASIC1.74□□□□□ -2.13
RAB40ALP0C0E4 RNU6-1145P-201ENST00000384246 107 ntBASIC1.74□□□□□ -2.13
RAB40ALP0C0E4 MT-TD-201ENST00000387419 68 ntBASIC1.74□□□□□ -2.13
RAB40ALP0C0E4 MRPS18CP6-201ENST00000423587 223 ntBASIC1.74□□□□□ -2.13
RAB40ALP0C0E4 TOMM22P2-201ENST00000430735 237 ntBASIC1.74□□□□□ -2.13
RAB40ALP0C0E4 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.74□□□□□ -2.13
RAB40ALP0C0E4 RN7SKP49-201ENST00000516675 260 ntBASIC1.74□□□□□ -2.13
RAB40ALP0C0E4 AC144568.1-201ENST00000520139 137 ntBASIC1.74□□□□□ -2.13
RAB40ALP0C0E4 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.74□□□□□ -2.13
RAB40ALP0C0E4 SNRPGP19-201ENST00000603826 189 ntBASIC1.74□□□□□ -2.13
RAB40ALP0C0E4 AC010900.2-201ENST00000604508 210 ntBASIC1.74□□□□□ -2.13
RAB40ALP0C0E4 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
RAB40ALP0C0E4 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.73□□□□□ -2.13
RAB40ALP0C0E4 RNU6-1301P-201ENST00000362724 104 ntBASIC1.73□□□□□ -2.13
RAB40ALP0C0E4 Y_RNA.58-201ENST00000362807 102 ntBASIC1.73□□□□□ -2.13
RAB40ALP0C0E4 Y_RNA.154-201ENST00000363624 102 ntBASIC1.73□□□□□ -2.13
RAB40ALP0C0E4 Y_RNA.287-201ENST00000364853 94 ntBASIC1.73□□□□□ -2.13
RAB40ALP0C0E4 RNY3P1-201ENST00000365085 102 ntBASIC1.73□□□□□ -2.13
RAB40ALP0C0E4 Y_RNA.314-201ENST00000365114 102 ntBASIC1.73□□□□□ -2.13
RAB40ALP0C0E4 RNY3-201ENST00000365484 102 ntBASIC1.73□□□□□ -2.13
RAB40ALP0C0E4 MIR520A-201ENST00000384862 85 ntBASIC1.73□□□□□ -2.13
RAB40ALP0C0E4 MIR515-2-201ENST00000384883 83 ntBASIC1.73□□□□□ -2.13
RAB40ALP0C0E4 MIR515-1-201ENST00000384884 83 ntBASIC1.73□□□□□ -2.13
RAB40ALP0C0E4 MIR559-201ENST00000385188 96 ntBASIC1.73□□□□□ -2.13
RAB40ALP0C0E4 Y_RNA.592-201ENST00000410274 109 ntBASIC1.73□□□□□ -2.13
RAB40ALP0C0E4 Y_RNA.605-201ENST00000410577 105 ntBASIC1.73□□□□□ -2.13
RAB40ALP0C0E4 RNU2-7P-201ENST00000410794 178 ntBASIC1.73□□□□□ -2.13
RAB40ALP0C0E4 CEP57L1P1-201ENST00000430943 1201 ntBASIC1.73□□□□□ -2.13
RAB40ALP0C0E4 AC099799.1-201ENST00000439809 192 ntBASIC1.73□□□□□ -2.13
RAB40ALP0C0E4 PCNPP5-201ENST00000452246 481 ntBASIC1.73□□□□□ -2.13
RAB40ALP0C0E4 RNU7-169P-201ENST00000459456 61 ntBASIC1.73□□□□□ -2.13
RAB40ALP0C0E4 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC1.73□□□□□ -2.13
RAB40ALP0C0E4 AP000942.3-201ENST00000603702 160 ntBASIC1.73□□□□□ -2.13
RAB40ALP0C0E4 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.73□□□□□ -2.13
RAB40ALP0C0E4 AL357075.2-201ENST00000614906 189 ntBASIC1.73□□□□□ -2.13
RAB40ALP0C0E4 AC084768.2-201ENST00000622736 221 ntBASIC1.73□□□□□ -2.13
RAB40ALP0C0E4 AL008636.1-201ENST00000625038 1018 ntBASIC1.73□□□□□ -2.13
RAB40ALP0C0E4 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.73□□□□□ -2.13
RAB40ALP0C0E4 AC010615.1-201ENST00000594254 1764 ntBASIC1.72□□□□□ -2.13
RAB40ALP0C0E4 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
RAB40ALP0C0E4 RNU4-73P-201ENST00000363164 141 ntBASIC1.72□□□□□ -2.13
RAB40ALP0C0E4 Y_RNA.187-201ENST00000363918 113 ntBASIC1.72□□□□□ -2.13
RAB40ALP0C0E4 SNORA72.2-201ENST00000365028 127 ntBASIC1.72□□□□□ -2.13
RAB40ALP0C0E4 RNU6-318P-201ENST00000384283 103 ntBASIC1.72□□□□□ -2.13
RAB40ALP0C0E4 MIR9-3-201ENST00000385084 90 ntBASIC1.72□□□□□ -2.13
RAB40ALP0C0E4 RNA5SP323-201ENST00000391094 133 ntBASIC1.72□□□□□ -2.13
RAB40ALP0C0E4 RNU2-20P-201ENST00000410425 191 ntBASIC1.72□□□□□ -2.13
RAB40ALP0C0E4 MTND4P28-201ENST00000426217 387 ntBASIC1.72□□□□□ -2.13
RAB40ALP0C0E4 AC245047.4-201ENST00000433189 144 ntBASIC1.72□□□□□ -2.13
RAB40ALP0C0E4 RNU7-152P-201ENST00000458982 64 ntBASIC1.72□□□□□ -2.13
RAB40ALP0C0E4 AC074133.1-201ENST00000515696 183 ntBASIC1.72□□□□□ -2.13
RAB40ALP0C0E4 Y_RNA.675-201ENST00000516389 149 ntBASIC1.72□□□□□ -2.13
RAB40ALP0C0E4 SNORA25.15-201ENST00000516487 89 ntBASIC1.72□□□□□ -2.13
RAB40ALP0C0E4 AC084364.2-201ENST00000546924 395 ntBASIC1.72□□□□□ -2.13
RAB40ALP0C0E4 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.72□□□□□ -2.13
RAB40ALP0C0E4 MIR4255-201ENST00000579351 72 ntBASIC1.72□□□□□ -2.13
RAB40ALP0C0E4 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.72□□□□□ -2.13
RAB40ALP0C0E4 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
RAB40ALP0C0E4 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
RAB40ALP0C0E4 Y_RNA.146-201ENST00000363549 102 ntBASIC1.71□□□□□ -2.14
RAB40ALP0C0E4 RNY3P11-201ENST00000364153 102 ntBASIC1.71□□□□□ -2.14
RAB40ALP0C0E4 RNU6-1264P-201ENST00000383891 107 ntBASIC1.71□□□□□ -2.14
RAB40ALP0C0E4 RNU6-296P-201ENST00000384608 107 ntBASIC1.71□□□□□ -2.14
RAB40ALP0C0E4 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
RAB40ALP0C0E4 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.71□□□□□ -2.14
RAB40ALP0C0E4 ELOCP21-201ENST00000412558 336 ntBASIC1.71□□□□□ -2.14
RAB40ALP0C0E4 EBAG9P1-201ENST00000418955 543 ntBASIC1.71□□□□□ -2.14
RAB40ALP0C0E4 AC003989.2-201ENST00000440224 169 ntBASIC1.71□□□□□ -2.14
RAB40ALP0C0E4 AC069257.2-201ENST00000441819 155 ntBASIC1.71□□□□□ -2.14
RAB40ALP0C0E4 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.71□□□□□ -2.14
RAB40ALP0C0E4 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.71□□□□□ -2.14
RAB40ALP0C0E4 RNU6-250P-201ENST00000516958 103 ntBASIC1.71□□□□□ -2.14
RAB40ALP0C0E4 RNU6-699P-201ENST00000517081 110 ntBASIC1.71□□□□□ -2.14
RAB40ALP0C0E4 GNAI2P1-201ENST00000541815 315 ntBASIC1.71□□□□□ -2.14
RAB40ALP0C0E4 MIR4795-201ENST00000584182 89 ntBASIC1.71□□□□□ -2.14
RAB40ALP0C0E4 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.71□□□□□ -2.14
RAB40ALP0C0E4 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
RAB40ALP0C0E4 SNORA33-201ENST00000363664 130 ntBASIC1.7□□□□□ -2.14
RAB40ALP0C0E4 Y_RNA.498-201ENST00000384460 102 ntBASIC1.7□□□□□ -2.14
RAB40ALP0C0E4 MIR628-201ENST00000385229 95 ntBASIC1.7□□□□□ -2.14
RAB40ALP0C0E4 RNA5SP467-201ENST00000391274 118 ntBASIC1.7□□□□□ -2.14
RAB40ALP0C0E4 SNORD12B-201ENST00000410433 91 ntBASIC1.7□□□□□ -2.14
RAB40ALP0C0E4 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.7□□□□□ -2.14
RAB40ALP0C0E4 RNU6-625P-201ENST00000459412 107 ntBASIC1.7□□□□□ -2.14
RAB40ALP0C0E4 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC1.7□□□□□ -2.14
RAB40ALP0C0E4 SNORA40.9-201ENST00000515895 93 ntBASIC1.7□□□□□ -2.14
RAB40ALP0C0E4 AC018448.1-201ENST00000552843 316 ntBASIC1.7□□□□□ -2.14
RAB40ALP0C0E4 AC022432.1-201ENST00000595739 310 ntBASIC1.7□□□□□ -2.14
RAB40ALP0C0E4 LARP7P1-201ENST00000605576 316 ntBASIC1.7□□□□□ -2.14
RAB40ALP0C0E4 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.69□□□□□ -2.14
RAB40ALP0C0E4 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
RAB40ALP0C0E4 RNA5SP190-201ENST00000365222 118 ntBASIC1.69□□□□□ -2.14
RAB40ALP0C0E4 Y_RNA.428-201ENST00000384078 102 ntBASIC1.69□□□□□ -2.14
RAB40ALP0C0E4 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC1.69□□□□□ -2.14
RAB40ALP0C0E4 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.69□□□□□ -2.14
RAB40ALP0C0E4 AL137100.2-201ENST00000555786 315 ntBASIC1.69□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 169.2 ms