Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.62□□□□□ -2.15
MT-ND1P03886 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.62□□□□□ -2.15
MT-ND1P03886 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.62□□□□□ -2.15
MT-ND1P03886 MIR934-201ENST00000401241 83 ntBASIC1.61□□□□□ -2.15
MT-ND1P03886 RNA5SP100-201ENST00000410903 110 ntBASIC1.61□□□□□ -2.15
MT-ND1P03886 RNA5SP59-201ENST00000410922 110 ntBASIC1.61□□□□□ -2.15
MT-ND1P03886 AL354751.2-201ENST00000415471 210 ntBASIC1.61□□□□□ -2.15
MT-ND1P03886 AC060773.1-201ENST00000421698 310 ntBASIC1.61□□□□□ -2.15
MT-ND1P03886 AC007677.1-201ENST00000445757 515 ntBASIC1.61□□□□□ -2.15
MT-ND1P03886 UBE2V1P7-201ENST00000446395 340 ntBASIC1.61□□□□□ -2.15
MT-ND1P03886 MTND4P19-201ENST00000446659 478 ntBASIC1.61□□□□□ -2.15
MT-ND1P03886 AC010469.2-201ENST00000496412 480 ntBASIC1.61□□□□□ -2.15
MT-ND1P03886 AC067942.3-201ENST00000512025 362 ntBASIC1.61□□□□□ -2.15
MT-ND1P03886 RN7SKP49-201ENST00000516675 260 ntBASIC1.61□□□□□ -2.15
MT-ND1P03886 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.61□□□□□ -2.15
MT-ND1P03886 AP002001.1-203ENST00000534002 267 ntBASIC1.61□□□□□ -2.15
MT-ND1P03886 AL442163.3-201ENST00000554110 156 ntBASIC1.61□□□□□ -2.15
MT-ND1P03886 AC110588.1-201ENST00000559699 137 ntBASIC1.61□□□□□ -2.15
MT-ND1P03886 AC020661.2-201ENST00000560114 134 ntBASIC1.61□□□□□ -2.15
MT-ND1P03886 AC006600.1-201ENST00000572529 153 ntBASIC1.61□□□□□ -2.15
MT-ND1P03886 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.61□□□□□ -2.15
MT-ND1P03886 MIR5188-201ENST00000583467 113 ntBASIC1.61□□□□□ -2.15
MT-ND1P03886 AC006157.1-201ENST00000611750 366 ntBASIC1.61□□□□□ -2.15
MT-ND1P03886 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.61□□□□□ -2.15
MT-ND1P03886 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.61□□□□□ -2.15
MT-ND1P03886 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.61□□□□□ -2.15
MT-ND1P03886 AL078596.1-201ENST00000624856 447 ntBASIC1.61□□□□□ -2.15
MT-ND1P03886 AC091812.1-201ENST00000432235 1948 ntBASIC1.6□□□□□ -2.15
MT-ND1P03886 RNU1-115P-201ENST00000365329 160 ntBASIC1.6□□□□□ -2.15
MT-ND1P03886 Y_RNA.445-201ENST00000384168 102 ntBASIC1.6□□□□□ -2.15
MT-ND1P03886 MIR30A-201ENST00000385092 71 ntBASIC1.6□□□□□ -2.15
MT-ND1P03886 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
MT-ND1P03886 Y_RNA.595-201ENST00000410403 105 ntBASIC1.6□□□□□ -2.15
MT-ND1P03886 SNORD12B-201ENST00000410433 91 ntBASIC1.6□□□□□ -2.15
MT-ND1P03886 MTCO2P12-201ENST00000427426 682 ntBASIC1.6□□□□□ -2.15
MT-ND1P03886 AL160004.2-201ENST00000432935 350 ntBASIC1.6□□□□□ -2.15
MT-ND1P03886 AL357134.1-201ENST00000445848 426 ntBASIC1.6□□□□□ -2.15
MT-ND1P03886 YWHAEP4-201ENST00000505390 198 ntBASIC1.6□□□□□ -2.15
MT-ND1P03886 RNU6-856P-201ENST00000516959 98 ntBASIC1.6□□□□□ -2.15
MT-ND1P03886 MIR2355-201ENST00000517199 87 ntBASIC1.6□□□□□ -2.15
MT-ND1P03886 AC013412.1-201ENST00000610687 192 ntBASIC1.6□□□□□ -2.15
MT-ND1P03886 AC022140.2-201ENST00000623500 188 ntBASIC1.6□□□□□ -2.15
MT-ND1P03886 AL606534.2-204ENST00000635008 178 ntBASIC1.6□□□□□ -2.15
MT-ND1P03886 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.6□□□□□ -2.15
MT-ND1P03886 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.59□□□□□ -2.15
MT-ND1P03886 Y_RNA.148-201ENST00000363557 117 ntBASIC1.59□□□□□ -2.15
MT-ND1P03886 RNU6-926P-201ENST00000384075 107 ntBASIC1.59□□□□□ -2.15
MT-ND1P03886 RNU6-1235P-201ENST00000384559 107 ntBASIC1.59□□□□□ -2.15
MT-ND1P03886 MIR1185-2-201ENST00000408687 86 ntBASIC1.59□□□□□ -2.15
MT-ND1P03886 RNU6-57P-201ENST00000411348 103 ntBASIC1.59□□□□□ -2.15
MT-ND1P03886 AC016909.1-201ENST00000415916 166 ntBASIC1.59□□□□□ -2.15
MT-ND1P03886 MCFD2P1-201ENST00000417812 300 ntBASIC1.59□□□□□ -2.15
MT-ND1P03886 MTCYBP6-201ENST00000441810 138 ntBASIC1.59□□□□□ -2.15
MT-ND1P03886 PCNPP5-201ENST00000452246 481 ntBASIC1.59□□□□□ -2.15
MT-ND1P03886 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.59□□□□□ -2.15
MT-ND1P03886 RNU6-498P-201ENST00000459468 107 ntBASIC1.59□□□□□ -2.15
MT-ND1P03886 Y_RNA.631-201ENST00000459607 101 ntBASIC1.59□□□□□ -2.15
MT-ND1P03886 RPS29P21-201ENST00000496272 170 ntBASIC1.59□□□□□ -2.15
MT-ND1P03886 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.59□□□□□ -2.15
MT-ND1P03886 RNU6-948P-201ENST00000516374 107 ntBASIC1.59□□□□□ -2.15
MT-ND1P03886 RN7SKP295-201ENST00000517264 153 ntBASIC1.59□□□□□ -2.15
MT-ND1P03886 CBX3P4-201ENST00000538909 354 ntBASIC1.59□□□□□ -2.15
MT-ND1P03886 AC018448.1-201ENST00000552843 316 ntBASIC1.59□□□□□ -2.15
MT-ND1P03886 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.59□□□□□ -2.15
MT-ND1P03886 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC1.59□□□□□ -2.15
MT-ND1P03886 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.59□□□□□ -2.15
MT-ND1P03886 VN1R91P-201ENST00000594377 169 ntBASIC1.59□□□□□ -2.15
MT-ND1P03886 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.59□□□□□ -2.15
MT-ND1P03886 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.59□□□□□ -2.15
MT-ND1P03886 AC011476.5-201ENST00000615594 130 ntBASIC1.59□□□□□ -2.15
MT-ND1P03886 AC134503.1-201ENST00000633048 54 ntBASIC1.59□□□□□ -2.15
MT-ND1P03886 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.59□□□□□ -2.16
MT-ND1P03886 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.58□□□□□ -2.16
MT-ND1P03886 RNU6-661P-201ENST00000362409 107 ntBASIC1.58□□□□□ -2.16
MT-ND1P03886 Y_RNA.128-201ENST00000363391 112 ntBASIC1.58□□□□□ -2.16
MT-ND1P03886 U3.8-201ENST00000363675 217 ntBASIC1.58□□□□□ -2.16
MT-ND1P03886 RNU5F-3P-201ENST00000363767 117 ntBASIC1.58□□□□□ -2.16
MT-ND1P03886 RNU6-961P-201ENST00000363893 105 ntBASIC1.58□□□□□ -2.16
MT-ND1P03886 SNORA22B-201ENST00000383876 138 ntBASIC1.58□□□□□ -2.16
MT-ND1P03886 RNY3P4-201ENST00000384428 101 ntBASIC1.58□□□□□ -2.16
MT-ND1P03886 Y_RNA.645-201ENST00000391229 102 ntBASIC1.58□□□□□ -2.16
MT-ND1P03886 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.58□□□□□ -2.16
MT-ND1P03886 AC099677.2-201ENST00000436385 175 ntBASIC1.58□□□□□ -2.16
MT-ND1P03886 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC1.58□□□□□ -2.16
MT-ND1P03886 NDUFB4P10-201ENST00000452541 359 ntBASIC1.58□□□□□ -2.16
MT-ND1P03886 RPL26P26-201ENST00000480251 434 ntBASIC1.58□□□□□ -2.16
MT-ND1P03886 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.58□□□□□ -2.16
MT-ND1P03886 SNORA40.9-201ENST00000515895 93 ntBASIC1.58□□□□□ -2.16
MT-ND1P03886 RNU6-1041P-201ENST00000516254 102 ntBASIC1.58□□□□□ -2.16
MT-ND1P03886 RNU6-911P-201ENST00000516523 104 ntBASIC1.58□□□□□ -2.16
MT-ND1P03886 RNU6-1012P-201ENST00000516606 109 ntBASIC1.58□□□□□ -2.16
MT-ND1P03886 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.58□□□□□ -2.16
MT-ND1P03886 AC055872.1-201ENST00000570978 278 ntBASIC1.58□□□□□ -2.16
MT-ND1P03886 MIR3171-201ENST00000584270 74 ntBASIC1.58□□□□□ -2.16
MT-ND1P03886 AC044792.1-201ENST00000593294 196 ntBASIC1.58□□□□□ -2.16
MT-ND1P03886 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.58□□□□□ -2.16
MT-ND1P03886 snoZ196.1-201ENST00000625269 89 ntBASIC1.58□□□□□ -2.16
MT-ND1P03886 AL159152.1-201ENST00000635019 2587 ntBASIC1.58□□□□□ -2.16
MT-ND1P03886 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
MT-ND1P03886 Y_RNA.11-201ENST00000362375 109 ntBASIC1.57□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 191.9 ms