Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 NFU1P2-201ENST00000448700 469 ntBASIC0.62□□□□□ -2.31
COL4A1P02462 SNORD65B-201ENST00000459126 73 ntBASIC0.62□□□□□ -2.31
COL4A1P02462 RPL39P28-201ENST00000465655 155 ntBASIC0.62□□□□□ -2.31
COL4A1P02462 AC025465.3-201ENST00000510570 311 ntBASIC0.62□□□□□ -2.31
COL4A1P02462 RNU6-506P-201ENST00000516553 94 ntBASIC0.62□□□□□ -2.31
COL4A1P02462 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
COL4A1P02462 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.62□□□□□ -2.31
COL4A1P02462 SNORA59B-202ENST00000578183 701 ntBASIC0.62□□□□□ -2.31
COL4A1P02462 MIR4753-201ENST00000585119 83 ntBASIC0.62□□□□□ -2.31
COL4A1P02462 AC019193.3-201ENST00000609144 554 ntBASIC0.62□□□□□ -2.31
COL4A1P02462 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC0.62□□□□□ -2.31
COL4A1P02462 MIR8065-201ENST00000620577 100 ntBASIC0.62□□□□□ -2.31
COL4A1P02462 AL121890.5-201ENST00000620848 304 ntBASIC0.62□□□□□ -2.31
COL4A1P02462 MIR1321-201ENST00000637766 79 ntBASIC0.62□□□□□ -2.31
COL4A1P02462 AC024614.3-201ENST00000637860 256 ntBASIC0.62□□□□□ -2.31
COL4A1P02462 MIR6759-201ENST00000638110 65 ntBASIC0.62□□□□□ -2.31
COL4A1P02462 Y_RNA.287-201ENST00000364853 94 ntBASIC0.62□□□□□ -2.31
COL4A1P02462 SNORD116-11-201ENST00000383882 92 ntBASIC0.62□□□□□ -2.31
COL4A1P02462 RNU6-245P-201ENST00000384020 107 ntBASIC0.62□□□□□ -2.31
COL4A1P02462 SNORD116-2-201ENST00000384274 95 ntBASIC0.62□□□□□ -2.31
COL4A1P02462 SNORD116-6-201ENST00000384711 96 ntBASIC0.62□□□□□ -2.31
COL4A1P02462 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC0.62□□□□□ -2.31
COL4A1P02462 MIR320B2-201ENST00000408479 138 ntBASIC0.62□□□□□ -2.31
COL4A1P02462 RNU2-70P-201ENST00000410718 179 ntBASIC0.62□□□□□ -2.31
COL4A1P02462 RPS27P16-201ENST00000425758 201 ntBASIC0.62□□□□□ -2.31
COL4A1P02462 AC010154.1-201ENST00000425857 269 ntBASIC0.62□□□□□ -2.31
COL4A1P02462 MTATP6P17-201ENST00000431030 672 ntBASIC0.62□□□□□ -2.31
COL4A1P02462 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC0.62□□□□□ -2.31
COL4A1P02462 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC0.62□□□□□ -2.31
COL4A1P02462 MTND1P29-201ENST00000448112 647 ntBASIC0.62□□□□□ -2.31
COL4A1P02462 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC0.62□□□□□ -2.31
COL4A1P02462 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC0.62□□□□□ -2.31
COL4A1P02462 snoU13.27-201ENST00000459278 104 ntBASIC0.62□□□□□ -2.31
COL4A1P02462 AF186996.7-201ENST00000492781 209 ntBASIC0.62□□□□□ -2.31
COL4A1P02462 MTCO2P30-201ENST00000503662 364 ntBASIC0.62□□□□□ -2.31
COL4A1P02462 RNU6-344P-201ENST00000516635 111 ntBASIC0.62□□□□□ -2.31
COL4A1P02462 RNU6-1088P-201ENST00000516850 104 ntBASIC0.62□□□□□ -2.31
COL4A1P02462 AC024909.2-201ENST00000553035 286 ntBASIC0.62□□□□□ -2.31
COL4A1P02462 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC0.62□□□□□ -2.31
COL4A1P02462 MZT1P2-201ENST00000604387 248 ntBASIC0.62□□□□□ -2.31
COL4A1P02462 FER-210ENST00000628534 558 ntTSL 5 BASIC0.62□□□□□ -2.31
COL4A1P02462 MTND4P5-201ENST00000435821 1374 ntBASIC0.61□□□□□ -2.31
COL4A1P02462 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC0.61□□□□□ -2.31
COL4A1P02462 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC0.61□□□□□ -2.31
COL4A1P02462 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC0.61□□□□□ -2.31
COL4A1P02462 RNU6-280P-201ENST00000364145 104 ntBASIC0.61□□□□□ -2.31
COL4A1P02462 RNU6-1305P-201ENST00000364353 104 ntBASIC0.61□□□□□ -2.31
COL4A1P02462 MIR521-1-201ENST00000384902 87 ntBASIC0.61□□□□□ -2.31
COL4A1P02462 MIR517A-201ENST00000385001 87 ntBASIC0.61□□□□□ -2.31
COL4A1P02462 MIR586-201ENST00000385035 97 ntBASIC0.61□□□□□ -2.31
COL4A1P02462 MIR92A1-201ENST00000385233 78 ntBASIC0.61□□□□□ -2.31
COL4A1P02462 ZNF885P-201ENST00000420174 1098 ntBASIC0.61□□□□□ -2.31
COL4A1P02462 MTCO3P29-201ENST00000432119 779 ntBASIC0.61□□□□□ -2.31
COL4A1P02462 USP9YP28-201ENST00000435142 589 ntBASIC0.61□□□□□ -2.31
COL4A1P02462 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC0.61□□□□□ -2.31
COL4A1P02462 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC0.61□□□□□ -2.31
COL4A1P02462 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC0.61□□□□□ -2.31
COL4A1P02462 snoU13.6-201ENST00000458785 104 ntBASIC0.61□□□□□ -2.31
COL4A1P02462 RNU6-221P-201ENST00000459541 99 ntBASIC0.61□□□□□ -2.31
COL4A1P02462 RPS26P55-201ENST00000471178 356 ntBASIC0.61□□□□□ -2.31
COL4A1P02462 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC0.61□□□□□ -2.31
COL4A1P02462 SNORA40.12-201ENST00000516329 111 ntBASIC0.61□□□□□ -2.31
COL4A1P02462 Y_RNA.682-201ENST00000516457 100 ntBASIC0.61□□□□□ -2.31
COL4A1P02462 RNA5SP285-201ENST00000516619 119 ntBASIC0.61□□□□□ -2.31
COL4A1P02462 Y_RNA.693-201ENST00000516641 110 ntBASIC0.61□□□□□ -2.31
COL4A1P02462 RNU6-58P-201ENST00000517143 103 ntBASIC0.61□□□□□ -2.31
COL4A1P02462 MTND2P38-201ENST00000522536 667 ntBASIC0.61□□□□□ -2.31
COL4A1P02462 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC0.61□□□□□ -2.31
COL4A1P02462 AC005668.1-201ENST00000571142 476 ntBASIC0.61□□□□□ -2.31
COL4A1P02462 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC0.61□□□□□ -2.31
COL4A1P02462 POLR3GP2-201ENST00000588366 668 ntBASIC0.61□□□□□ -2.31
COL4A1P02462 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC0.61□□□□□ -2.31
COL4A1P02462 Six3os1_7.1-201ENST00000621512 201 ntBASIC0.61□□□□□ -2.31
COL4A1P02462 AL359880.1-201ENST00000621879 266 ntBASIC0.61□□□□□ -2.31
COL4A1P02462 TTK-211ENST00000627129 240 ntTSL 5 BASIC0.61□□□□□ -2.31
COL4A1P02462 RNU1-76P-201ENST00000362903 159 ntBASIC0.6□□□□□ -2.31
COL4A1P02462 SNORD50.1-201ENST00000362987 71 ntBASIC0.6□□□□□ -2.31
COL4A1P02462 SNORD115-8-201ENST00000363856 82 ntBASIC0.6□□□□□ -2.31
COL4A1P02462 SNORD115-38-201ENST00000365037 82 ntBASIC0.6□□□□□ -2.31
COL4A1P02462 MIR1253-201ENST00000408273 105 ntBASIC0.6□□□□□ -2.31
COL4A1P02462 COX6CP10-201ENST00000416832 224 ntBASIC0.6□□□□□ -2.31
COL4A1P02462 MTCO1P20-201ENST00000425366 358 ntBASIC0.6□□□□□ -2.31
COL4A1P02462 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC0.6□□□□□ -2.31
COL4A1P02462 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC0.6□□□□□ -2.31
COL4A1P02462 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC0.6□□□□□ -2.31
COL4A1P02462 SEPT14P3-201ENST00000439401 183 ntBASIC0.6□□□□□ -2.31
COL4A1P02462 MTCO3P18-201ENST00000440206 761 ntBASIC0.6□□□□□ -2.31
COL4A1P02462 MTND2P22-201ENST00000444325 1033 ntBASIC0.6□□□□□ -2.31
COL4A1P02462 AL732372.2-207ENST00000445840 183 ntBASIC0.6□□□□□ -2.31
COL4A1P02462 AC009237.7-201ENST00000447357 229 ntBASIC0.6□□□□□ -2.31
COL4A1P02462 SEPT14P2-201ENST00000453405 183 ntBASIC0.6□□□□□ -2.31
COL4A1P02462 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC0.6□□□□□ -2.31
COL4A1P02462 SEPT14P4-201ENST00000513445 186 ntBASIC0.6□□□□□ -2.31
COL4A1P02462 RNU6-566P-201ENST00000516790 107 ntBASIC0.6□□□□□ -2.31
COL4A1P02462 RNA5SP404-201ENST00000517118 132 ntBASIC0.6□□□□□ -2.31
COL4A1P02462 FO082796.1-201ENST00000523795 183 ntBASIC0.6□□□□□ -2.31
COL4A1P02462 TPRKBP2-201ENST00000565969 475 ntBASIC0.6□□□□□ -2.31
COL4A1P02462 AL365434.2-201ENST00000607979 234 ntBASIC0.6□□□□□ -2.31
COL4A1P02462 AC092954.2-201ENST00000609103 430 ntBASIC0.6□□□□□ -2.31
COL4A1P02462 AL353149.1-201ENST00000610667 244 ntBASIC0.6□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms