Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 Y_RNA.277-201ENST00000364754 102 ntBASIC2.2□□□□□ -2.06
LDLRP01130 Y_RNA.352-201ENST00000365439 102 ntBASIC2.2□□□□□ -2.06
LDLRP01130 MIR95-201ENST00000385072 81 ntBASIC2.2□□□□□ -2.06
LDLRP01130 SNORD23.1-201ENST00000408212 104 ntBASIC2.2□□□□□ -2.06
LDLRP01130 RNA5SP201-201ENST00000410316 124 ntBASIC2.2□□□□□ -2.06
LDLRP01130 RNU2-32P-201ENST00000411193 191 ntBASIC2.2□□□□□ -2.06
LDLRP01130 AL139156.1-201ENST00000412785 841 ntBASIC2.2□□□□□ -2.06
LDLRP01130 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.2□□□□□ -2.06
LDLRP01130 AC096920.1-201ENST00000423991 241 ntBASIC2.2□□□□□ -2.06
LDLRP01130 EIF1P2-201ENST00000428233 350 ntBASIC2.2□□□□□ -2.06
LDLRP01130 WARS2P1-201ENST00000429678 537 ntBASIC2.2□□□□□ -2.06
LDLRP01130 HMGN2P23-201ENST00000456759 269 ntBASIC2.2□□□□□ -2.06
LDLRP01130 AC104435.1-201ENST00000483483 166 ntBASIC2.2□□□□□ -2.06
LDLRP01130 RPS23P5-201ENST00000495419 428 ntBASIC2.2□□□□□ -2.06
LDLRP01130 AC093023.1-201ENST00000547375 507 ntBASIC2.2□□□□□ -2.06
LDLRP01130 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.2□□□□□ -2.06
LDLRP01130 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.2□□□□□ -2.06
LDLRP01130 MIR4659A-201ENST00000580269 81 ntBASIC2.2□□□□□ -2.06
LDLRP01130 SCARNA4-201ENST00000629045 128 ntBASIC2.2□□□□□ -2.06
LDLRP01130 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
LDLRP01130 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
LDLRP01130 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.19□□□□□ -2.06
LDLRP01130 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.19□□□□□ -2.06
LDLRP01130 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
LDLRP01130 Y_RNA.4-201ENST00000362333 112 ntBASIC2.19□□□□□ -2.06
LDLRP01130 Y_RNA.65-201ENST00000362846 100 ntBASIC2.19□□□□□ -2.06
LDLRP01130 SNORD81.1-201ENST00000363064 77 ntBASIC2.19□□□□□ -2.06
LDLRP01130 U3.9-201ENST00000363823 204 ntBASIC2.19□□□□□ -2.06
LDLRP01130 Y_RNA.269-201ENST00000364685 89 ntBASIC2.19□□□□□ -2.06
LDLRP01130 RNU6-546P-201ENST00000383991 107 ntBASIC2.19□□□□□ -2.06
LDLRP01130 AL355497.1-201ENST00000406262 551 ntBASIC2.19□□□□□ -2.06
LDLRP01130 RNU4-61P-201ENST00000411243 107 ntBASIC2.19□□□□□ -2.06
LDLRP01130 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.19□□□□□ -2.06
LDLRP01130 PIGPP3-201ENST00000425307 415 ntBASIC2.19□□□□□ -2.06
LDLRP01130 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC2.19□□□□□ -2.06
LDLRP01130 HSPE1P25-201ENST00000455484 251 ntBASIC2.19□□□□□ -2.06
LDLRP01130 AP000870.1-201ENST00000472927 406 ntBASIC2.19□□□□□ -2.06
LDLRP01130 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.19□□□□□ -2.06
LDLRP01130 RNU6-496P-201ENST00000516145 99 ntBASIC2.19□□□□□ -2.06
LDLRP01130 SNORA48.11-201ENST00000517015 89 ntBASIC2.19□□□□□ -2.06
LDLRP01130 MIR2355-201ENST00000517199 87 ntBASIC2.19□□□□□ -2.06
LDLRP01130 SNORA81.3-201ENST00000517283 198 ntBASIC2.19□□□□□ -2.06
LDLRP01130 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.19□□□□□ -2.06
LDLRP01130 RRN3P3-201ENST00000549207 578 ntBASIC2.19□□□□□ -2.06
LDLRP01130 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.19□□□□□ -2.06
LDLRP01130 FTX_2.1-201ENST00000618816 94 ntBASIC2.19□□□□□ -2.06
LDLRP01130 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
LDLRP01130 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.18□□□□□ -2.06
LDLRP01130 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
LDLRP01130 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.18□□□□□ -2.06
LDLRP01130 SNORD113-8-201ENST00000363497 74 ntBASIC2.18□□□□□ -2.06
LDLRP01130 Y_RNA.338-201ENST00000365320 114 ntBASIC2.18□□□□□ -2.06
LDLRP01130 Y_RNA.555-201ENST00000384673 110 ntBASIC2.18□□□□□ -2.06
LDLRP01130 MIR561-201ENST00000385216 97 ntBASIC2.18□□□□□ -2.06
LDLRP01130 PCNPP3-201ENST00000393579 471 ntBASIC2.18□□□□□ -2.06
LDLRP01130 Y_RNA.602-201ENST00000410535 92 ntBASIC2.18□□□□□ -2.06
LDLRP01130 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.18□□□□□ -2.06
LDLRP01130 PRELID3BP1-201ENST00000457142 540 ntBASIC2.18□□□□□ -2.06
LDLRP01130 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC2.18□□□□□ -2.06
LDLRP01130 RNA5SP281-201ENST00000516504 135 ntBASIC2.18□□□□□ -2.06
LDLRP01130 AC022868.1-201ENST00000517767 391 ntBASIC2.18□□□□□ -2.06
LDLRP01130 AC091144.1-201ENST00000519573 138 ntBASIC2.18□□□□□ -2.06
LDLRP01130 MDM2-232ENST00000544561 213 ntTSL 5 BASIC2.18□□□□□ -2.06
LDLRP01130 EIF4A1P12-201ENST00000551910 141 ntBASIC2.18□□□□□ -2.06
LDLRP01130 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.18□□□□□ -2.06
LDLRP01130 MIR6840-201ENST00000611937 71 ntBASIC2.18□□□□□ -2.06
LDLRP01130 AC004792.1-201ENST00000614523 137 ntBASIC2.18□□□□□ -2.06
LDLRP01130 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2.18□□□□□ -2.06
LDLRP01130 MIR1291-201ENST00000627649 87 ntBASIC2.18□□□□□ -2.06
LDLRP01130 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.18□□□□□ -2.06
LDLRP01130 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.18□□□□□ -2.06
LDLRP01130 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
LDLRP01130 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
LDLRP01130 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.17□□□□□ -2.06
LDLRP01130 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
LDLRP01130 RNA5SP361-201ENST00000362686 118 ntBASIC2.17□□□□□ -2.06
LDLRP01130 RNU6-1266P-201ENST00000362794 105 ntBASIC2.17□□□□□ -2.06
LDLRP01130 Y_RNA.76-201ENST00000362931 109 ntBASIC2.17□□□□□ -2.06
LDLRP01130 Y_RNA.150-201ENST00000363562 102 ntBASIC2.17□□□□□ -2.06
LDLRP01130 Y_RNA.164-201ENST00000363709 102 ntBASIC2.17□□□□□ -2.06
LDLRP01130 SNORD115-32-201ENST00000364079 82 ntBASIC2.17□□□□□ -2.06
LDLRP01130 RNU6-280P-201ENST00000364145 104 ntBASIC2.17□□□□□ -2.06
LDLRP01130 RNU1-91P-201ENST00000364746 163 ntBASIC2.17□□□□□ -2.06
LDLRP01130 Y_RNA.286-201ENST00000364813 102 ntBASIC2.17□□□□□ -2.06
LDLRP01130 RNA5SP37-201ENST00000365420 130 ntBASIC2.17□□□□□ -2.06
LDLRP01130 U8.10-201ENST00000384260 133 ntBASIC2.17□□□□□ -2.06
LDLRP01130 SNORD63-201ENST00000384262 68 ntBASIC2.17□□□□□ -2.06
LDLRP01130 SNORD78.2-201ENST00000391076 69 ntBASIC2.17□□□□□ -2.06
LDLRP01130 RNU1-139P-201ENST00000391307 165 ntBASIC2.17□□□□□ -2.06
LDLRP01130 MIR1294-201ENST00000408503 142 ntBASIC2.17□□□□□ -2.06
LDLRP01130 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC2.17□□□□□ -2.06
LDLRP01130 AC009238.1-201ENST00000442165 424 ntBASIC2.17□□□□□ -2.06
LDLRP01130 AC009237.6-201ENST00000446969 424 ntBASIC2.17□□□□□ -2.06
LDLRP01130 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.17□□□□□ -2.06
LDLRP01130 Y_RNA.700-201ENST00000516806 100 ntBASIC2.17□□□□□ -2.06
LDLRP01130 SCARNA24.2-201ENST00000516968 130 ntBASIC2.17□□□□□ -2.06
LDLRP01130 RNU6-182P-201ENST00000516970 105 ntBASIC2.17□□□□□ -2.06
LDLRP01130 AC021269.2-201ENST00000532318 330 ntBASIC2.17□□□□□ -2.06
LDLRP01130 AC027288.2-201ENST00000553028 243 ntBASIC2.17□□□□□ -2.06
LDLRP01130 Y_RNA.772-201ENST00000606692 102 ntBASIC2.17□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms