Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 Y_RNA.706-201ENST00000516933 99 ntBASIC1.41□□□□□ -2.18
TIMP1P01033 RNU6-856P-201ENST00000516959 98 ntBASIC1.41□□□□□ -2.18
TIMP1P01033 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.41□□□□□ -2.18
TIMP1P01033 AL121579.1-201ENST00000555129 305 ntBASIC1.41□□□□□ -2.18
TIMP1P01033 MIR4801-201ENST00000582704 82 ntBASIC1.41□□□□□ -2.18
TIMP1P01033 MIR151B-201ENST00000584249 96 ntBASIC1.41□□□□□ -2.18
TIMP1P01033 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.41□□□□□ -2.18
TIMP1P01033 SNORD11B-201ENST00000607707 90 ntBASIC1.41□□□□□ -2.18
TIMP1P01033 AC005014.2-201ENST00000607795 599 ntBASIC1.41□□□□□ -2.18
TIMP1P01033 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC1.41□□□□□ -2.18
TIMP1P01033 AC008873.1-201ENST00000625051 138 ntBASIC1.41□□□□□ -2.18
TIMP1P01033 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
TIMP1P01033 AL159152.1-201ENST00000635019 2587 ntBASIC1.4□□□□□ -2.19
TIMP1P01033 RNU6-873P-201ENST00000363833 107 ntBASIC1.4□□□□□ -2.19
TIMP1P01033 RNU6-1305P-201ENST00000364353 104 ntBASIC1.4□□□□□ -2.19
TIMP1P01033 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC1.4□□□□□ -2.19
TIMP1P01033 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.4□□□□□ -2.19
TIMP1P01033 Y_RNA.404-201ENST00000383978 102 ntBASIC1.4□□□□□ -2.19
TIMP1P01033 RNU6-1235P-201ENST00000384559 107 ntBASIC1.4□□□□□ -2.19
TIMP1P01033 MIR598-201ENST00000384868 97 ntBASIC1.4□□□□□ -2.19
TIMP1P01033 RNU6-700P-201ENST00000391043 107 ntBASIC1.4□□□□□ -2.19
TIMP1P01033 SNORA75.4-201ENST00000391278 119 ntBASIC1.4□□□□□ -2.19
TIMP1P01033 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.4□□□□□ -2.19
TIMP1P01033 MIR548J-201ENST00000408833 112 ntBASIC1.4□□□□□ -2.19
TIMP1P01033 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.4□□□□□ -2.19
TIMP1P01033 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC1.4□□□□□ -2.19
TIMP1P01033 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC1.4□□□□□ -2.19
TIMP1P01033 RNU6-498P-201ENST00000459468 107 ntBASIC1.4□□□□□ -2.19
TIMP1P01033 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.4□□□□□ -2.19
TIMP1P01033 AP000870.1-201ENST00000472927 406 ntBASIC1.4□□□□□ -2.19
TIMP1P01033 RNU4ATAC7P-201ENST00000516280 125 ntBASIC1.4□□□□□ -2.19
TIMP1P01033 RNA5SP384-201ENST00000516615 116 ntBASIC1.4□□□□□ -2.19
TIMP1P01033 SUMO2P18-201ENST00000518873 252 ntBASIC1.4□□□□□ -2.19
TIMP1P01033 AC105029.1-201ENST00000520250 669 ntBASIC1.4□□□□□ -2.19
TIMP1P01033 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.4□□□□□ -2.19
TIMP1P01033 AL355802.3-201ENST00000607571 545 ntBASIC1.4□□□□□ -2.19
TIMP1P01033 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC1.4□□□□□ -2.19
TIMP1P01033 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.4□□□□□ -2.19
TIMP1P01033 AC022513.1-201ENST00000624512 117 ntBASIC1.4□□□□□ -2.19
TIMP1P01033 RNY1P16-201ENST00000363063 111 ntBASIC1.39□□□□□ -2.19
TIMP1P01033 SNORA72.1-201ENST00000363485 129 ntBASIC1.39□□□□□ -2.19
TIMP1P01033 RNU6-1080P-201ENST00000383982 107 ntBASIC1.39□□□□□ -2.19
TIMP1P01033 RNU6-331P-201ENST00000384724 107 ntBASIC1.39□□□□□ -2.19
TIMP1P01033 RNU1-139P-201ENST00000391307 165 ntBASIC1.39□□□□□ -2.19
TIMP1P01033 RNU4-14P-201ENST00000410858 122 ntBASIC1.39□□□□□ -2.19
TIMP1P01033 MTCYBP10-201ENST00000424905 650 ntBASIC1.39□□□□□ -2.19
TIMP1P01033 MTND3P23-201ENST00000431980 347 ntBASIC1.39□□□□□ -2.19
TIMP1P01033 ATP5J2P3-201ENST00000451550 258 ntBASIC1.39□□□□□ -2.19
TIMP1P01033 RNU1-98P-201ENST00000458992 160 ntBASIC1.39□□□□□ -2.19
TIMP1P01033 MTND4P17-201ENST00000470444 350 ntBASIC1.39□□□□□ -2.19
TIMP1P01033 AC092991.1-201ENST00000477176 376 ntBASIC1.39□□□□□ -2.19
TIMP1P01033 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.39□□□□□ -2.19
TIMP1P01033 RNVU1-2-201ENST00000516326 135 ntBASIC1.39□□□□□ -2.19
TIMP1P01033 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC1.39□□□□□ -2.19
TIMP1P01033 UBL5P4-201ENST00000562584 236 ntBASIC1.39□□□□□ -2.19
TIMP1P01033 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC1.39□□□□□ -2.19
TIMP1P01033 AC005730.3-201ENST00000583067 366 ntBASIC1.39□□□□□ -2.19
TIMP1P01033 UBE2V2P2-201ENST00000587677 504 ntBASIC1.39□□□□□ -2.19
TIMP1P01033 AC016925.2-201ENST00000605108 242 ntBASIC1.39□□□□□ -2.19
TIMP1P01033 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.39□□□□□ -2.19
TIMP1P01033 AC083806.3-201ENST00000614016 455 ntBASIC1.39□□□□□ -2.19
TIMP1P01033 AL078596.1-201ENST00000624856 447 ntBASIC1.39□□□□□ -2.19
TIMP1P01033 AC068205.3-201ENST00000636385 468 ntBASIC1.39□□□□□ -2.19
TIMP1P01033 MIR6767-201ENST00000637302 66 ntBASIC1.39□□□□□ -2.19
TIMP1P01033 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
TIMP1P01033 Y_RNA.36-201ENST00000362602 112 ntBASIC1.38□□□□□ -2.19
TIMP1P01033 Y_RNA.142-201ENST00000363491 102 ntBASIC1.38□□□□□ -2.19
TIMP1P01033 Y_RNA.474-201ENST00000384341 102 ntBASIC1.38□□□□□ -2.19
TIMP1P01033 MIR222-201ENST00000384992 110 ntBASIC1.38□□□□□ -2.19
TIMP1P01033 MIR10B-201ENST00000385011 110 ntBASIC1.38□□□□□ -2.19
TIMP1P01033 MIR190B-201ENST00000401119 79 ntBASIC1.38□□□□□ -2.19
TIMP1P01033 RNA5SP504-201ENST00000410676 117 ntBASIC1.38□□□□□ -2.19
TIMP1P01033 RPS20P15-201ENST00000412792 311 ntBASIC1.38□□□□□ -2.19
TIMP1P01033 MTND4P18-201ENST00000447010 465 ntBASIC1.38□□□□□ -2.19
TIMP1P01033 AC112492.4-201ENST00000456549 352 ntBASIC1.38□□□□□ -2.19
TIMP1P01033 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.38□□□□□ -2.19
TIMP1P01033 RNU7-57P-201ENST00000459540 60 ntBASIC1.38□□□□□ -2.19
TIMP1P01033 AC097473.1-201ENST00000508142 408 ntBASIC1.38□□□□□ -2.19
TIMP1P01033 RNU6-1114P-201ENST00000516022 107 ntBASIC1.38□□□□□ -2.19
TIMP1P01033 RNU1-117P-201ENST00000517041 158 ntBASIC1.38□□□□□ -2.19
TIMP1P01033 MIR5690-201ENST00000583739 73 ntBASIC1.38□□□□□ -2.19
TIMP1P01033 AC113139.1-201ENST00000605049 239 ntBASIC1.38□□□□□ -2.19
TIMP1P01033 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.38□□□□□ -2.19
TIMP1P01033 AL669831.3-213ENST00000636676 183 ntBASIC1.38□□□□□ -2.19
TIMP1P01033 MIR424-201ENST00000362227 98 ntBASIC1.37□□□□□ -2.19
TIMP1P01033 Y_RNA.106-201ENST00000363189 100 ntBASIC1.37□□□□□ -2.19
TIMP1P01033 Y_RNA.179-201ENST00000363844 90 ntBASIC1.37□□□□□ -2.19
TIMP1P01033 RNU6-793P-201ENST00000384233 104 ntBASIC1.37□□□□□ -2.19
TIMP1P01033 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
TIMP1P01033 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
TIMP1P01033 RN7SKP51-201ENST00000410781 304 ntBASIC1.37□□□□□ -2.19
TIMP1P01033 RNU6-370P-201ENST00000411008 104 ntBASIC1.37□□□□□ -2.19
TIMP1P01033 AC060773.1-201ENST00000421698 310 ntBASIC1.37□□□□□ -2.19
TIMP1P01033 USP9YP16-201ENST00000430287 407 ntBASIC1.37□□□□□ -2.19
TIMP1P01033 AL445305.1-201ENST00000432577 575 ntBASIC1.37□□□□□ -2.19
TIMP1P01033 AL353997.1-201ENST00000432936 108 ntBASIC1.37□□□□□ -2.19
TIMP1P01033 AC016717.1-201ENST00000448918 286 ntBASIC1.37□□□□□ -2.19
TIMP1P01033 NDUFB4P10-201ENST00000452541 359 ntBASIC1.37□□□□□ -2.19
TIMP1P01033 USP9YP23-201ENST00000455085 407 ntBASIC1.37□□□□□ -2.19
TIMP1P01033 RPL17P19-201ENST00000489069 552 ntBASIC1.37□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 108.7 ms