Protein–RNA interactions for Protein: O95985

TOP3B, DNA topoisomerase 3-beta-1, humanhuman

Known RBP Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3BO95985 AC074198.2-201ENST00000508153 258 ntBASIC2.59□□□□□ -1.99
TOP3BO95985 RNA5SP458-201ENST00000516188 119 ntBASIC2.59□□□□□ -1.99
TOP3BO95985 SCARNA11.3-201ENST00000517276 130 ntBASIC2.59□□□□□ -1.99
TOP3BO95985 AC022559.1-201ENST00000520905 205 ntBASIC2.59□□□□□ -1.99
TOP3BO95985 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.59□□□□□ -1.99
TOP3BO95985 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC2.59□□□□□ -1.99
TOP3BO95985 AL356575.1-201ENST00000603008 283 ntBASIC2.59□□□□□ -1.99
TOP3BO95985 MZT1P2-201ENST00000604387 248 ntBASIC2.59□□□□□ -1.99
TOP3BO95985 AC022441.3-201ENST00000605737 136 ntBASIC2.59□□□□□ -1.99
TOP3BO95985 AL353997.5-201ENST00000618886 171 ntBASIC2.59□□□□□ -1.99
TOP3BO95985 CTSLP2-204ENST00000629029 392 ntBASIC2.59□□□□□ -1.99
TOP3BO95985 SNORD98-201ENST00000636377 67 ntBASIC2.59□□□□□ -1.99
TOP3BO95985 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -2
TOP3BO95985 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.59□□□□□ -2
TOP3BO95985 MTND5P35-201ENST00000557537 1720 ntBASIC2.59□□□□□ -2
TOP3BO95985 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.59□□□□□ -2
TOP3BO95985 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.58□□□□□ -2
TOP3BO95985 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
TOP3BO95985 Y_RNA.40-201ENST00000362645 93 ntBASIC2.58□□□□□ -2
TOP3BO95985 Y_RNA.179-201ENST00000363844 90 ntBASIC2.58□□□□□ -2
TOP3BO95985 RNU4-56P-201ENST00000364700 142 ntBASIC2.58□□□□□ -2
TOP3BO95985 DEFA7P-201ENST00000382676 285 ntBASIC2.58□□□□□ -2
TOP3BO95985 RNU1-57P-201ENST00000384491 166 ntBASIC2.58□□□□□ -2
TOP3BO95985 MIR27B-201ENST00000385129 97 ntBASIC2.58□□□□□ -2
TOP3BO95985 MIR549A-201ENST00000385268 96 ntBASIC2.58□□□□□ -2
TOP3BO95985 HMGN2P35-201ENST00000412164 270 ntBASIC2.58□□□□□ -2
TOP3BO95985 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.58□□□□□ -2
TOP3BO95985 UQCRBP2-201ENST00000447827 297 ntBASIC2.58□□□□□ -2
TOP3BO95985 AC005042.3-201ENST00000453230 174 ntBASIC2.58□□□□□ -2
TOP3BO95985 SNORD2.1-201ENST00000458762 69 ntBASIC2.58□□□□□ -2
TOP3BO95985 snoU13.14-201ENST00000459372 104 ntBASIC2.58□□□□□ -2
TOP3BO95985 RNU6-625P-201ENST00000459412 107 ntBASIC2.58□□□□□ -2
TOP3BO95985 AC074133.1-201ENST00000515696 183 ntBASIC2.58□□□□□ -2
TOP3BO95985 RNA5SP112-201ENST00000515937 99 ntBASIC2.58□□□□□ -2
TOP3BO95985 RNU5F-2P-201ENST00000516066 82 ntBASIC2.58□□□□□ -2
TOP3BO95985 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.58□□□□□ -2
TOP3BO95985 RNU6-966P-201ENST00000516479 104 ntBASIC2.58□□□□□ -2
TOP3BO95985 SNORA31.15-201ENST00000516771 132 ntBASIC2.58□□□□□ -2
TOP3BO95985 Y_RNA.703-201ENST00000516846 111 ntBASIC2.58□□□□□ -2
TOP3BO95985 CYCSP23-201ENST00000519781 313 ntBASIC2.58□□□□□ -2
TOP3BO95985 AC018448.1-201ENST00000552843 316 ntBASIC2.58□□□□□ -2
TOP3BO95985 CYP4A27P-201ENST00000567218 190 ntBASIC2.58□□□□□ -2
TOP3BO95985 MIR3910-1-201ENST00000580936 111 ntBASIC2.58□□□□□ -2
TOP3BO95985 MIR3136-201ENST00000583498 78 ntBASIC2.58□□□□□ -2
TOP3BO95985 AC072026.1-201ENST00000605023 201 ntBASIC2.58□□□□□ -2
TOP3BO95985 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC2.58□□□□□ -2
TOP3BO95985 MIR7515-201ENST00000637837 67 ntBASIC2.58□□□□□ -2
TOP3BO95985 BX322639.1-202ENST00000423987 2213 ntBASIC2.58□□□□□ -2
TOP3BO95985 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.57□□□□□ -2
TOP3BO95985 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
TOP3BO95985 RNU6-655P-201ENST00000362858 107 ntBASIC2.57□□□□□ -2
TOP3BO95985 SNORA68.1-201ENST00000364537 132 ntBASIC2.57□□□□□ -2
TOP3BO95985 SNORA72.2-201ENST00000365028 127 ntBASIC2.57□□□□□ -2
TOP3BO95985 RNU6-793P-201ENST00000384233 104 ntBASIC2.57□□□□□ -2
TOP3BO95985 Y_RNA.506-201ENST00000384494 102 ntBASIC2.57□□□□□ -2
TOP3BO95985 RNU6-125P-201ENST00000384505 107 ntBASIC2.57□□□□□ -2
TOP3BO95985 AIMP1P2-201ENST00000425294 312 ntBASIC2.57□□□□□ -2
TOP3BO95985 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.57□□□□□ -2
TOP3BO95985 AC009237.7-201ENST00000447357 229 ntBASIC2.57□□□□□ -2
TOP3BO95985 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC2.57□□□□□ -2
TOP3BO95985 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.57□□□□□ -2
TOP3BO95985 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.57□□□□□ -2
TOP3BO95985 AC091179.3-201ENST00000474761 144 ntBASIC2.57□□□□□ -2
TOP3BO95985 SRIP1-201ENST00000489235 288 ntBASIC2.57□□□□□ -2
TOP3BO95985 CKS1BP2-201ENST00000497342 240 ntBASIC2.57□□□□□ -2
TOP3BO95985 RNA5SP282-201ENST00000516355 108 ntBASIC2.57□□□□□ -2
TOP3BO95985 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC2.57□□□□□ -2
TOP3BO95985 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC2.57□□□□□ -2
TOP3BO95985 AC103810.1-201ENST00000579873 453 ntBASIC2.57□□□□□ -2
TOP3BO95985 TEX41-243ENST00000614173 190 ntTSL 5 BASIC2.57□□□□□ -2
TOP3BO95985 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC2.57□□□□□ -2
TOP3BO95985 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.57□□□□□ -2
TOP3BO95985 AC080100.1-201ENST00000624239 5356 ntBASIC2.56□□□□□ -2
TOP3BO95985 MIR6073-201ENST00000352083 89 ntBASIC2.56□□□□□ -2
TOP3BO95985 RNU6-486P-201ENST00000363116 107 ntBASIC2.56□□□□□ -2
TOP3BO95985 RNU6-1210P-201ENST00000363775 107 ntBASIC2.56□□□□□ -2
TOP3BO95985 Y_RNA.226-201ENST00000364337 114 ntBASIC2.56□□□□□ -2
TOP3BO95985 Y_RNA.338-201ENST00000365320 114 ntBASIC2.56□□□□□ -2
TOP3BO95985 RNU6-245P-201ENST00000384020 107 ntBASIC2.56□□□□□ -2
TOP3BO95985 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.56□□□□□ -2
TOP3BO95985 MIR208B-201ENST00000401172 77 ntBASIC2.56□□□□□ -2
TOP3BO95985 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.56□□□□□ -2
TOP3BO95985 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC2.56□□□□□ -2
TOP3BO95985 AC005520.5-201ENST00000613926 164 ntBASIC2.56□□□□□ -2
TOP3BO95985 AC073349.3-201ENST00000617616 186 ntBASIC2.56□□□□□ -2
TOP3BO95985 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.56□□□□□ -2
TOP3BO95985 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
TOP3BO95985 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.55□□□□□ -2
TOP3BO95985 Y_RNA.101-201ENST00000363154 102 ntBASIC2.55□□□□□ -2
TOP3BO95985 Y_RNA.498-201ENST00000384460 102 ntBASIC2.55□□□□□ -2
TOP3BO95985 MIR627-201ENST00000384979 97 ntBASIC2.55□□□□□ -2
TOP3BO95985 RNU6-918P-201ENST00000391219 106 ntBASIC2.55□□□□□ -2
TOP3BO95985 RN7SKP51-201ENST00000410781 304 ntBASIC2.55□□□□□ -2
TOP3BO95985 ELOCP21-201ENST00000412558 336 ntBASIC2.55□□□□□ -2
TOP3BO95985 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.55□□□□□ -2
TOP3BO95985 RAB28P5-201ENST00000427490 651 ntBASIC2.55□□□□□ -2
TOP3BO95985 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC2.55□□□□□ -2
TOP3BO95985 AL121594.1-201ENST00000475906 575 ntBASIC2.55□□□□□ -2
TOP3BO95985 RNA5SP320-201ENST00000516263 124 ntBASIC2.55□□□□□ -2
TOP3BO95985 RPPH1-2P-201ENST00000516688 293 ntBASIC2.55□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms