Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 MIR126-201ENST00000362291 85 ntBASIC1.68□□□□□ -2.14
GGPS1O95749 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC1.68□□□□□ -2.14
GGPS1O95749 MT-TL1-201ENST00000386347 75 ntBASIC1.68□□□□□ -2.14
GGPS1O95749 RNA5SP323-201ENST00000391094 133 ntBASIC1.68□□□□□ -2.14
GGPS1O95749 MTCYBP10-201ENST00000424905 650 ntBASIC1.68□□□□□ -2.14
GGPS1O95749 AL354695.1-201ENST00000427935 228 ntBASIC1.68□□□□□ -2.14
GGPS1O95749 MTND4P18-201ENST00000447010 465 ntBASIC1.68□□□□□ -2.14
GGPS1O95749 AC009474.2-201ENST00000451383 136 ntBASIC1.68□□□□□ -2.14
GGPS1O95749 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.68□□□□□ -2.14
GGPS1O95749 RPL7P42-201ENST00000481005 679 ntBASIC1.68□□□□□ -2.14
GGPS1O95749 AL161670.1-201ENST00000554348 137 ntBASIC1.68□□□□□ -2.14
GGPS1O95749 AC090617.3-201ENST00000573670 475 ntBASIC1.68□□□□□ -2.14
GGPS1O95749 AC005899.2-201ENST00000584353 90 ntBASIC1.68□□□□□ -2.14
GGPS1O95749 AC022432.1-201ENST00000595739 310 ntBASIC1.68□□□□□ -2.14
GGPS1O95749 AC099654.5-201ENST00000636479 350 ntBASIC1.68□□□□□ -2.14
GGPS1O95749 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
GGPS1O95749 AP000648.3-201ENST00000623539 4507 ntBASIC1.67□□□□□ -2.14
GGPS1O95749 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.67□□□□□ -2.14
GGPS1O95749 RNU6-1266P-201ENST00000362794 105 ntBASIC1.67□□□□□ -2.14
GGPS1O95749 Y_RNA.364-201ENST00000365532 101 ntBASIC1.67□□□□□ -2.14
GGPS1O95749 RNU6-876P-201ENST00000391295 104 ntBASIC1.67□□□□□ -2.14
GGPS1O95749 MIR1304-201ENST00000408243 91 ntBASIC1.67□□□□□ -2.14
GGPS1O95749 AC004965.1-201ENST00000413033 213 ntBASIC1.67□□□□□ -2.14
GGPS1O95749 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC1.67□□□□□ -2.14
GGPS1O95749 EIF1P2-201ENST00000428233 350 ntBASIC1.67□□□□□ -2.14
GGPS1O95749 AL353997.1-201ENST00000432936 108 ntBASIC1.67□□□□□ -2.14
GGPS1O95749 TRMT112P2-201ENST00000512910 132 ntBASIC1.67□□□□□ -2.14
GGPS1O95749 Y_RNA.691-201ENST00000516611 103 ntBASIC1.67□□□□□ -2.14
GGPS1O95749 RNU1-92P-201ENST00000517017 135 ntBASIC1.67□□□□□ -2.14
GGPS1O95749 AC125232.2-201ENST00000592457 143 ntBASIC1.67□□□□□ -2.14
GGPS1O95749 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.67□□□□□ -2.14
GGPS1O95749 PISRT1.1-201ENST00000616930 107 ntBASIC1.67□□□□□ -2.14
GGPS1O95749 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC1.67□□□□□ -2.14
GGPS1O95749 AC100821.1-201ENST00000523153 2479 ntBASIC1.67□□□□□ -2.14
GGPS1O95749 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.67□□□□□ -2.14
GGPS1O95749 ZNF209P-201ENST00000593450 2304 ntBASIC1.67□□□□□ -2.14
GGPS1O95749 WWP1P1-201ENST00000466609 2769 ntBASIC1.66□□□□□ -2.14
GGPS1O95749 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
GGPS1O95749 SNORA4.2-201ENST00000365313 147 ntBASIC1.66□□□□□ -2.14
GGPS1O95749 Y_RNA.404-201ENST00000383978 102 ntBASIC1.66□□□□□ -2.14
GGPS1O95749 RNU6-1001P-201ENST00000411265 100 ntBASIC1.66□□□□□ -2.14
GGPS1O95749 AL161935.2-201ENST00000414627 60 ntBASIC1.66□□□□□ -2.14
GGPS1O95749 PDCL2P1-201ENST00000419302 352 ntBASIC1.66□□□□□ -2.14
GGPS1O95749 TOMM22P2-201ENST00000430735 237 ntBASIC1.66□□□□□ -2.14
GGPS1O95749 AC092473.1-201ENST00000441098 221 ntBASIC1.66□□□□□ -2.14
GGPS1O95749 RPS26P45-201ENST00000471748 340 ntBASIC1.66□□□□□ -2.14
GGPS1O95749 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC1.66□□□□□ -2.14
GGPS1O95749 AL163195.1-201ENST00000496941 348 ntBASIC1.66□□□□□ -2.14
GGPS1O95749 AC103851.1-201ENST00000506833 274 ntBASIC1.66□□□□□ -2.14
GGPS1O95749 RNU1-142P-201ENST00000516682 145 ntBASIC1.66□□□□□ -2.14
GGPS1O95749 RNU6-307P-201ENST00000516743 106 ntBASIC1.66□□□□□ -2.14
GGPS1O95749 AC091144.1-201ENST00000519573 138 ntBASIC1.66□□□□□ -2.14
GGPS1O95749 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.66□□□□□ -2.14
GGPS1O95749 MIR4422-201ENST00000581938 83 ntBASIC1.66□□□□□ -2.14
GGPS1O95749 AL359075.3-201ENST00000613288 217 ntBASIC1.66□□□□□ -2.14
GGPS1O95749 U6.108-201ENST00000637764 58 ntBASIC1.66□□□□□ -2.14
GGPS1O95749 AL391987.6-201ENST00000305671 199 ntBASIC1.65□□□□□ -2.15
GGPS1O95749 MIR302D-201ENST00000362275 68 ntBASIC1.65□□□□□ -2.15
GGPS1O95749 RNU6-874P-201ENST00000362390 105 ntBASIC1.65□□□□□ -2.15
GGPS1O95749 SNORA7.1-201ENST00000363750 139 ntBASIC1.65□□□□□ -2.15
GGPS1O95749 SNORA75.4-201ENST00000391278 119 ntBASIC1.65□□□□□ -2.15
GGPS1O95749 COX6CP10-201ENST00000416832 224 ntBASIC1.65□□□□□ -2.15
GGPS1O95749 HSPE1P24-201ENST00000450782 238 ntBASIC1.65□□□□□ -2.15
GGPS1O95749 HMGN1P12-201ENST00000499125 195 ntBASIC1.65□□□□□ -2.15
GGPS1O95749 CYCSP23-201ENST00000519781 313 ntBASIC1.65□□□□□ -2.15
GGPS1O95749 AL137100.2-201ENST00000555786 315 ntBASIC1.65□□□□□ -2.15
GGPS1O95749 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.65□□□□□ -2.15
GGPS1O95749 FRG2DP-202ENST00000566967 323 ntBASIC1.65□□□□□ -2.15
GGPS1O95749 MIR4421-201ENST00000578133 69 ntBASIC1.65□□□□□ -2.15
GGPS1O95749 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.65□□□□□ -2.15
GGPS1O95749 WT1-AS_8.1-201ENST00000615200 275 ntBASIC1.65□□□□□ -2.15
GGPS1O95749 AC022306.2-201ENST00000617563 647 ntBASIC1.65□□□□□ -2.15
GGPS1O95749 AC095038.3-201ENST00000634439 195 ntBASIC1.65□□□□□ -2.15
GGPS1O95749 ICE2P2-201ENST00000483823 2787 ntBASIC1.64□□□□□ -2.15
GGPS1O95749 RNU6-331P-201ENST00000384724 107 ntBASIC1.64□□□□□ -2.15
GGPS1O95749 RNU1-78P-201ENST00000391248 165 ntBASIC1.64□□□□□ -2.15
GGPS1O95749 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.64□□□□□ -2.15
GGPS1O95749 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.64□□□□□ -2.15
GGPS1O95749 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.64□□□□□ -2.15
GGPS1O95749 SCARNA16.2-201ENST00000516520 172 ntBASIC1.64□□□□□ -2.15
GGPS1O95749 APOOP3-201ENST00000536787 586 ntBASIC1.64□□□□□ -2.15
GGPS1O95749 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.64□□□□□ -2.15
GGPS1O95749 MIR4709-201ENST00000577272 72 ntBASIC1.64□□□□□ -2.15
GGPS1O95749 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.64□□□□□ -2.15
GGPS1O95749 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
GGPS1O95749 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.63□□□□□ -2.15
GGPS1O95749 Y_RNA.67-201ENST00000362870 100 ntBASIC1.63□□□□□ -2.15
GGPS1O95749 RNU6-271P-201ENST00000363858 105 ntBASIC1.63□□□□□ -2.15
GGPS1O95749 RNU6-203P-201ENST00000384038 104 ntBASIC1.63□□□□□ -2.15
GGPS1O95749 MIR194-1-201ENST00000384892 85 ntBASIC1.63□□□□□ -2.15
GGPS1O95749 MIR329-1-201ENST00000385028 80 ntBASIC1.63□□□□□ -2.15
GGPS1O95749 RNA5SP247-201ENST00000411181 105 ntBASIC1.63□□□□□ -2.15
GGPS1O95749 UBE2V1P7-201ENST00000446395 340 ntBASIC1.63□□□□□ -2.15
GGPS1O95749 RPS27P1-201ENST00000450552 247 ntBASIC1.63□□□□□ -2.15
GGPS1O95749 Y_RNA.635-201ENST00000459041 101 ntBASIC1.63□□□□□ -2.15
GGPS1O95749 RNU7-87P-201ENST00000459343 62 ntBASIC1.63□□□□□ -2.15
GGPS1O95749 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.63□□□□□ -2.15
GGPS1O95749 RPL31P58-201ENST00000469001 379 ntBASIC1.63□□□□□ -2.15
GGPS1O95749 RNU6-970P-201ENST00000516312 107 ntBASIC1.63□□□□□ -2.15
GGPS1O95749 RNU7-128P-201ENST00000517247 62 ntBASIC1.63□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms