Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 Y_RNA.310-201ENST00000365063 113 ntBASIC2.93□□□□□ -1.94
CNOT4O95628 RNU4-11P-201ENST00000365287 132 ntBASIC2.93□□□□□ -1.94
CNOT4O95628 RNU6-376P-201ENST00000384731 106 ntBASIC2.93□□□□□ -1.94
CNOT4O95628 SNORA40-201ENST00000388090 126 ntBASIC2.93□□□□□ -1.94
CNOT4O95628 AC008267.6-201ENST00000441664 139 ntBASIC2.93□□□□□ -1.94
CNOT4O95628 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.93□□□□□ -1.94
CNOT4O95628 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC2.93□□□□□ -1.94
CNOT4O95628 SRIP1-201ENST00000489235 288 ntBASIC2.93□□□□□ -1.94
CNOT4O95628 RN7SL504P-201ENST00000494496 287 ntBASIC2.93□□□□□ -1.94
CNOT4O95628 SNORA70.12-201ENST00000516084 153 ntBASIC2.93□□□□□ -1.94
CNOT4O95628 AC022616.8-201ENST00000533569 253 ntBASIC2.93□□□□□ -1.94
CNOT4O95628 AC109810.1-201ENST00000534066 224 ntBASIC2.93□□□□□ -1.94
CNOT4O95628 DNAJC19P2-201ENST00000593340 302 ntBASIC2.93□□□□□ -1.94
CNOT4O95628 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.93□□□□□ -1.94
CNOT4O95628 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
CNOT4O95628 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
CNOT4O95628 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC2.92□□□□□ -1.94
CNOT4O95628 MIR30E-201ENST00000362104 92 ntBASIC2.92□□□□□ -1.94
CNOT4O95628 Y_RNA.24-201ENST00000362508 103 ntBASIC2.92□□□□□ -1.94
CNOT4O95628 VTRNA1-1-201ENST00000363120 99 ntBASIC2.92□□□□□ -1.94
CNOT4O95628 AP002088.1-201ENST00000382740 395 ntBASIC2.92□□□□□ -1.94
CNOT4O95628 Y_RNA.572-201ENST00000384757 98 ntBASIC2.92□□□□□ -1.94
CNOT4O95628 MIR548B-201ENST00000385247 97 ntBASIC2.92□□□□□ -1.94
CNOT4O95628 MIR616-201ENST00000385293 97 ntBASIC2.92□□□□□ -1.94
CNOT4O95628 MIR526A2-201ENST00000390198 65 ntBASIC2.92□□□□□ -1.94
CNOT4O95628 SNORA12-201ENST00000391162 147 ntBASIC2.92□□□□□ -1.94
CNOT4O95628 RNU2-63P-201ENST00000410792 194 ntBASIC2.92□□□□□ -1.94
CNOT4O95628 RPL30P13-201ENST00000418873 348 ntBASIC2.92□□□□□ -1.94
CNOT4O95628 AL139281.1-201ENST00000422120 335 ntBASIC2.92□□□□□ -1.94
CNOT4O95628 COTL1P1-201ENST00000422309 375 ntBASIC2.92□□□□□ -1.94
CNOT4O95628 SNORA25.12-201ENST00000516202 82 ntBASIC2.92□□□□□ -1.94
CNOT4O95628 RNU6-1007P-201ENST00000516586 107 ntBASIC2.92□□□□□ -1.94
CNOT4O95628 EIF4BP1-201ENST00000554881 351 ntBASIC2.92□□□□□ -1.94
CNOT4O95628 MIR5739-201ENST00000619803 80 ntBASIC2.92□□□□□ -1.94
CNOT4O95628 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
CNOT4O95628 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
CNOT4O95628 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
CNOT4O95628 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.92□□□□□ -1.94
CNOT4O95628 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
CNOT4O95628 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.92□□□□□ -1.94
CNOT4O95628 AC000403.1-201ENST00000613696 3585 ntBASIC2.91□□□□□ -1.94
CNOT4O95628 AC093010.3-201ENST00000570269 15214 ntBASIC2.91□□□□□ -1.94
CNOT4O95628 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
CNOT4O95628 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
CNOT4O95628 RNU6-1205P-201ENST00000363625 106 ntBASIC2.91□□□□□ -1.94
CNOT4O95628 RNU6-969P-201ENST00000383900 105 ntBASIC2.91□□□□□ -1.94
CNOT4O95628 Y_RNA.510-201ENST00000384511 114 ntBASIC2.91□□□□□ -1.94
CNOT4O95628 MIR513C-201ENST00000401352 84 ntBASIC2.91□□□□□ -1.94
CNOT4O95628 AC074290.1-201ENST00000448883 135 ntBASIC2.91□□□□□ -1.94
CNOT4O95628 RNU7-141P-201ENST00000459304 62 ntBASIC2.91□□□□□ -1.94
CNOT4O95628 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.91□□□□□ -1.94
CNOT4O95628 SCARNA8-201ENST00000515924 131 ntBASIC2.91□□□□□ -1.94
CNOT4O95628 RNU6-453P-201ENST00000516819 85 ntBASIC2.91□□□□□ -1.94
CNOT4O95628 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.91□□□□□ -1.94
CNOT4O95628 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.91□□□□□ -1.94
CNOT4O95628 AL670379.2-201ENST00000604983 252 ntBASIC2.91□□□□□ -1.94
CNOT4O95628 RPL17P51-201ENST00000605218 238 ntBASIC2.91□□□□□ -1.94
CNOT4O95628 AC025754.2-201ENST00000606491 432 ntBASIC2.91□□□□□ -1.94
CNOT4O95628 uc_338.1-201ENST00000612113 180 ntBASIC2.91□□□□□ -1.94
CNOT4O95628 AL391903.3-201ENST00000612158 163 ntBASIC2.91□□□□□ -1.94
CNOT4O95628 AC006386.2-201ENST00000624491 75 ntBASIC2.91□□□□□ -1.94
CNOT4O95628 AC012005.1-201ENST00000624575 75 ntBASIC2.91□□□□□ -1.94
CNOT4O95628 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC2.91□□□□□ -1.94
CNOT4O95628 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC2.91□□□□□ -1.94
CNOT4O95628 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC2.91□□□□□ -1.94
CNOT4O95628 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC2.91□□□□□ -1.94
CNOT4O95628 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.9□□□□□ -1.94
CNOT4O95628 RNU6-1305P-201ENST00000364353 104 ntBASIC2.9□□□□□ -1.95
CNOT4O95628 Y_RNA.337-201ENST00000365312 102 ntBASIC2.9□□□□□ -1.95
CNOT4O95628 Y_RNA.629-201ENST00000411368 105 ntBASIC2.9□□□□□ -1.95
CNOT4O95628 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.9□□□□□ -1.95
CNOT4O95628 EIF4EP4-201ENST00000424916 578 ntBASIC2.9□□□□□ -1.95
CNOT4O95628 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC2.9□□□□□ -1.95
CNOT4O95628 S100A11P2-201ENST00000467589 312 ntBASIC2.9□□□□□ -1.95
CNOT4O95628 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC2.9□□□□□ -1.95
CNOT4O95628 MIR5004-201ENST00000579078 107 ntBASIC2.9□□□□□ -1.95
CNOT4O95628 MIR5688-201ENST00000580619 83 ntBASIC2.9□□□□□ -1.95
CNOT4O95628 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.9□□□□□ -1.95
CNOT4O95628 MIR3658-201ENST00000636291 56 ntBASIC2.9□□□□□ -1.95
CNOT4O95628 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.9□□□□□ -1.95
CNOT4O95628 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
CNOT4O95628 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
CNOT4O95628 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC2.89□□□□□ -1.95
CNOT4O95628 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.89□□□□□ -1.95
CNOT4O95628 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
CNOT4O95628 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
CNOT4O95628 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.89□□□□□ -1.95
CNOT4O95628 RNU6-805P-201ENST00000365643 106 ntBASIC2.89□□□□□ -1.95
CNOT4O95628 MIR586-201ENST00000385035 97 ntBASIC2.89□□□□□ -1.95
CNOT4O95628 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
CNOT4O95628 MTND4LP9-201ENST00000427694 174 ntBASIC2.89□□□□□ -1.95
CNOT4O95628 AC245047.8-201ENST00000456455 284 ntBASIC2.89□□□□□ -1.95
CNOT4O95628 HMGN1P18-201ENST00000457642 277 ntBASIC2.89□□□□□ -1.95
CNOT4O95628 CYP2C59P-201ENST00000457790 269 ntBASIC2.89□□□□□ -1.95
CNOT4O95628 RN7SL442P-201ENST00000473804 320 ntBASIC2.89□□□□□ -1.95
CNOT4O95628 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.89□□□□□ -1.95
CNOT4O95628 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.89□□□□□ -1.95
CNOT4O95628 RNA5SP341-201ENST00000516261 117 ntBASIC2.89□□□□□ -1.95
CNOT4O95628 RPL30P11-203ENST00000598995 310 ntBASIC2.89□□□□□ -1.95
CNOT4O95628 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC2.89□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 141.9 ms