Protein–RNA interactions for Protein: O95343

SIX3, Homeobox protein SIX3, humanhuman

Predicted RBP Predictions only

Length 332 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3O95343 AC092991.1-201ENST00000477176 376 ntBASIC1.62□□□□□ -2.15
SIX3O95343 RNU6-1114P-201ENST00000516022 107 ntBASIC1.62□□□□□ -2.15
SIX3O95343 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.62□□□□□ -2.15
SIX3O95343 AC025647.1-201ENST00000517879 253 ntBASIC1.62□□□□□ -2.15
SIX3O95343 AP001485.1-201ENST00000604799 199 ntBASIC1.62□□□□□ -2.15
SIX3O95343 AL359075.3-201ENST00000613288 217 ntBASIC1.62□□□□□ -2.15
SIX3O95343 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC1.62□□□□□ -2.15
SIX3O95343 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
SIX3O95343 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
SIX3O95343 MTND5P16-201ENST00000460269 1703 ntBASIC1.61□□□□□ -2.15
SIX3O95343 RNU6-222P-201ENST00000362438 107 ntBASIC1.61□□□□□ -2.15
SIX3O95343 Y_RNA.106-201ENST00000363189 100 ntBASIC1.61□□□□□ -2.15
SIX3O95343 Y_RNA.160-201ENST00000363677 92 ntBASIC1.61□□□□□ -2.15
SIX3O95343 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC1.61□□□□□ -2.15
SIX3O95343 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.61□□□□□ -2.15
SIX3O95343 Y_RNA.433-201ENST00000384089 102 ntBASIC1.61□□□□□ -2.15
SIX3O95343 RNU6-767P-201ENST00000384132 107 ntBASIC1.61□□□□□ -2.15
SIX3O95343 RNA5SP467-201ENST00000391274 118 ntBASIC1.61□□□□□ -2.15
SIX3O95343 RNU6-876P-201ENST00000391295 104 ntBASIC1.61□□□□□ -2.15
SIX3O95343 Y_RNA.594-201ENST00000410373 140 ntBASIC1.61□□□□□ -2.15
SIX3O95343 HMGN1P12-201ENST00000499125 195 ntBASIC1.61□□□□□ -2.15
SIX3O95343 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.61□□□□□ -2.15
SIX3O95343 Y_RNA.683-201ENST00000516508 93 ntBASIC1.61□□□□□ -2.15
SIX3O95343 RNU6-307P-201ENST00000516743 106 ntBASIC1.61□□□□□ -2.15
SIX3O95343 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC1.61□□□□□ -2.15
SIX3O95343 AC093023.1-201ENST00000547375 507 ntBASIC1.61□□□□□ -2.15
SIX3O95343 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC1.61□□□□□ -2.15
SIX3O95343 AL121579.1-201ENST00000555129 305 ntBASIC1.61□□□□□ -2.15
SIX3O95343 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC1.61□□□□□ -2.15
SIX3O95343 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.61□□□□□ -2.15
SIX3O95343 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
SIX3O95343 CASC19-280ENST00000642102 1351 ntBASIC1.6□□□□□ -2.15
SIX3O95343 AL391987.6-201ENST00000305671 199 ntBASIC1.6□□□□□ -2.15
SIX3O95343 SNORA63D-201ENST00000364359 132 ntBASIC1.6□□□□□ -2.15
SIX3O95343 RNU4-42P-201ENST00000364738 142 ntBASIC1.6□□□□□ -2.15
SIX3O95343 MIR10B-201ENST00000385011 110 ntBASIC1.6□□□□□ -2.15
SIX3O95343 SNORA67.5-201ENST00000391036 107 ntBASIC1.6□□□□□ -2.15
SIX3O95343 MIR548K-201ENST00000408406 116 ntBASIC1.6□□□□□ -2.15
SIX3O95343 RNA5SP504-201ENST00000410676 117 ntBASIC1.6□□□□□ -2.15
SIX3O95343 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.6□□□□□ -2.15
SIX3O95343 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC1.6□□□□□ -2.15
SIX3O95343 RPL26P26-201ENST00000480251 434 ntBASIC1.6□□□□□ -2.15
SIX3O95343 AC026782.1-201ENST00000512952 449 ntBASIC1.6□□□□□ -2.15
SIX3O95343 AC093303.1-201ENST00000514549 295 ntBASIC1.6□□□□□ -2.15
SIX3O95343 RNU6-970P-201ENST00000516312 107 ntBASIC1.6□□□□□ -2.15
SIX3O95343 RNA5SP102-201ENST00000516865 106 ntBASIC1.6□□□□□ -2.15
SIX3O95343 RNU6-250P-201ENST00000516958 103 ntBASIC1.6□□□□□ -2.15
SIX3O95343 AC027419.1-201ENST00000522976 328 ntBASIC1.6□□□□□ -2.15
SIX3O95343 AC024995.1-201ENST00000523014 93 ntBASIC1.6□□□□□ -2.15
SIX3O95343 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.6□□□□□ -2.15
SIX3O95343 AL137100.2-201ENST00000555786 315 ntBASIC1.6□□□□□ -2.15
SIX3O95343 MIR4422-201ENST00000581938 83 ntBASIC1.6□□□□□ -2.15
SIX3O95343 MZT1P2-201ENST00000604387 248 ntBASIC1.6□□□□□ -2.15
SIX3O95343 AC009229.3-201ENST00000608056 282 ntBASIC1.6□□□□□ -2.15
SIX3O95343 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.6□□□□□ -2.15
SIX3O95343 AC092794.1-201ENST00000612734 582 ntBASIC1.6□□□□□ -2.15
SIX3O95343 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC1.6□□□□□ -2.15
SIX3O95343 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.6□□□□□ -2.15
SIX3O95343 RNY1P16-201ENST00000363063 111 ntBASIC1.59□□□□□ -2.15
SIX3O95343 SNORA33-201ENST00000363664 130 ntBASIC1.59□□□□□ -2.15
SIX3O95343 Y_RNA.287-201ENST00000364853 94 ntBASIC1.59□□□□□ -2.15
SIX3O95343 Y_RNA.458-201ENST00000384240 102 ntBASIC1.59□□□□□ -2.15
SIX3O95343 MIR1185-2-201ENST00000408687 86 ntBASIC1.59□□□□□ -2.15
SIX3O95343 AC004965.1-201ENST00000413033 213 ntBASIC1.59□□□□□ -2.15
SIX3O95343 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.59□□□□□ -2.15
SIX3O95343 MTCYBP10-201ENST00000424905 650 ntBASIC1.59□□□□□ -2.15
SIX3O95343 AC092423.1-201ENST00000430165 186 ntBASIC1.59□□□□□ -2.15
SIX3O95343 NDUFB4P10-201ENST00000452541 359 ntBASIC1.59□□□□□ -2.15
SIX3O95343 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC1.59□□□□□ -2.15
SIX3O95343 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC1.59□□□□□ -2.15
SIX3O95343 AC046134.1-201ENST00000514454 666 ntBASIC1.59□□□□□ -2.15
SIX3O95343 RNA5SP476-201ENST00000516613 103 ntBASIC1.59□□□□□ -2.15
SIX3O95343 RNU7-30P-201ENST00000516835 62 ntBASIC1.59□□□□□ -2.15
SIX3O95343 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.59□□□□□ -2.15
SIX3O95343 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.59□□□□□ -2.15
SIX3O95343 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC1.59□□□□□ -2.15
SIX3O95343 CBX3P4-201ENST00000538909 354 ntBASIC1.59□□□□□ -2.15
SIX3O95343 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC1.59□□□□□ -2.15
SIX3O95343 AC090617.3-201ENST00000573670 475 ntBASIC1.59□□□□□ -2.15
SIX3O95343 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC1.59□□□□□ -2.15
SIX3O95343 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.59□□□□□ -2.15
SIX3O95343 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
SIX3O95343 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.58□□□□□ -2.16
SIX3O95343 RNU6-879P-201ENST00000364328 108 ntBASIC1.58□□□□□ -2.16
SIX3O95343 RNU6-338P-201ENST00000383888 105 ntBASIC1.58□□□□□ -2.16
SIX3O95343 Y_RNA.482-201ENST00000384377 111 ntBASIC1.58□□□□□ -2.16
SIX3O95343 RNU6-950P-201ENST00000384651 107 ntBASIC1.58□□□□□ -2.16
SIX3O95343 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.58□□□□□ -2.16
SIX3O95343 MIR190B-201ENST00000401119 79 ntBASIC1.58□□□□□ -2.16
SIX3O95343 RN7SKP101-201ENST00000411376 320 ntBASIC1.58□□□□□ -2.16
SIX3O95343 UBE2V1P7-201ENST00000446395 340 ntBASIC1.58□□□□□ -2.16
SIX3O95343 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC1.58□□□□□ -2.16
SIX3O95343 RNU1-123P-201ENST00000458950 160 ntBASIC1.58□□□□□ -2.16
SIX3O95343 RNU7-95P-201ENST00000459222 64 ntBASIC1.58□□□□□ -2.16
SIX3O95343 RPL7P42-201ENST00000481005 679 ntBASIC1.58□□□□□ -2.16
SIX3O95343 AL163195.1-201ENST00000496941 348 ntBASIC1.58□□□□□ -2.16
SIX3O95343 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.58□□□□□ -2.16
SIX3O95343 AC005730.3-201ENST00000583067 366 ntBASIC1.58□□□□□ -2.16
SIX3O95343 AC005899.2-201ENST00000584353 90 ntBASIC1.58□□□□□ -2.16
SIX3O95343 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC1.58□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms