Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 AC108667.1-201ENST00000428618 249 ntBASIC1.92□□□□□ -2.1
MBD4O95243 JTBP1-201ENST00000441314 247 ntBASIC1.92□□□□□ -2.1
MBD4O95243 snoU13.9-201ENST00000458927 103 ntBASIC1.92□□□□□ -2.1
MBD4O95243 snoU13.27-201ENST00000459278 104 ntBASIC1.92□□□□□ -2.1
MBD4O95243 RNU1-142P-201ENST00000516682 145 ntBASIC1.92□□□□□ -2.1
MBD4O95243 MIR2355-201ENST00000517199 87 ntBASIC1.92□□□□□ -2.1
MBD4O95243 AL137100.2-201ENST00000555786 315 ntBASIC1.92□□□□□ -2.1
MBD4O95243 AC113139.1-201ENST00000605049 239 ntBASIC1.92□□□□□ -2.1
MBD4O95243 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.92□□□□□ -2.1
MBD4O95243 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.92□□□□□ -2.1
MBD4O95243 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC1.92□□□□□ -2.1
MBD4O95243 RNU6-1188P-201ENST00000363795 107 ntBASIC1.91□□□□□ -2.1
MBD4O95243 RNU6-879P-201ENST00000364328 108 ntBASIC1.91□□□□□ -2.1
MBD4O95243 RNA5SP467-201ENST00000391274 118 ntBASIC1.91□□□□□ -2.1
MBD4O95243 UQCRBP2-201ENST00000447827 297 ntBASIC1.91□□□□□ -2.1
MBD4O95243 AC074133.1-201ENST00000515696 183 ntBASIC1.91□□□□□ -2.1
MBD4O95243 RNU6-1213P-201ENST00000517075 94 ntBASIC1.91□□□□□ -2.1
MBD4O95243 AC091144.1-201ENST00000519573 138 ntBASIC1.91□□□□□ -2.1
MBD4O95243 AC104260.1-201ENST00000616660 539 ntBASIC1.91□□□□□ -2.1
MBD4O95243 AC006435.5-201ENST00000624486 112 ntBASIC1.91□□□□□ -2.1
MBD4O95243 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.91□□□□□ -2.1
MBD4O95243 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
MBD4O95243 RNU6-1264P-201ENST00000383891 107 ntBASIC1.9□□□□□ -2.11
MBD4O95243 RNU6-1145P-201ENST00000384246 107 ntBASIC1.9□□□□□ -2.11
MBD4O95243 SNORA75.6-201ENST00000391318 127 ntBASIC1.9□□□□□ -2.11
MBD4O95243 COX6CP10-201ENST00000416832 224 ntBASIC1.9□□□□□ -2.11
MBD4O95243 AC073910.1-201ENST00000445047 438 ntBASIC1.9□□□□□ -2.11
MBD4O95243 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.9□□□□□ -2.11
MBD4O95243 RNU6-264P-201ENST00000517134 104 ntBASIC1.9□□□□□ -2.11
MBD4O95243 MIR3684-201ENST00000579779 74 ntBASIC1.9□□□□□ -2.11
MBD4O95243 AC016925.2-201ENST00000605108 242 ntBASIC1.9□□□□□ -2.11
MBD4O95243 AC133104.2-201ENST00000615272 193 ntBASIC1.9□□□□□ -2.11
MBD4O95243 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.9□□□□□ -2.11
MBD4O95243 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.9□□□□□ -2.11
MBD4O95243 Y_RNA.358-201ENST00000365491 99 ntBASIC1.89□□□□□ -2.11
MBD4O95243 RNU6-338P-201ENST00000383888 105 ntBASIC1.89□□□□□ -2.11
MBD4O95243 Y_RNA.390-201ENST00000383932 102 ntBASIC1.89□□□□□ -2.11
MBD4O95243 Y_RNA.474-201ENST00000384341 102 ntBASIC1.89□□□□□ -2.11
MBD4O95243 RNU6-950P-201ENST00000384651 107 ntBASIC1.89□□□□□ -2.11
MBD4O95243 Y_RNA.577-201ENST00000384794 101 ntBASIC1.89□□□□□ -2.11
MBD4O95243 MIR625-201ENST00000385047 85 ntBASIC1.89□□□□□ -2.11
MBD4O95243 MIR1323-201ENST00000408090 73 ntBASIC1.89□□□□□ -2.11
MBD4O95243 AL603825.1-201ENST00000438481 80 ntBASIC1.89□□□□□ -2.11
MBD4O95243 RN7SKP49-201ENST00000516675 260 ntBASIC1.89□□□□□ -2.11
MBD4O95243 AC022868.1-201ENST00000517767 391 ntBASIC1.89□□□□□ -2.11
MBD4O95243 SUB1P3-201ENST00000564581 315 ntBASIC1.89□□□□□ -2.11
MBD4O95243 UBE2V2P2-201ENST00000587677 504 ntBASIC1.89□□□□□ -2.11
MBD4O95243 AP000942.3-201ENST00000603702 160 ntBASIC1.89□□□□□ -2.11
MBD4O95243 AL645939.4-201ENST00000604495 135 ntBASIC1.89□□□□□ -2.11
MBD4O95243 RBM11P1-201ENST00000604951 799 ntBASIC1.89□□□□□ -2.11
MBD4O95243 Y_RNA.142-201ENST00000363491 102 ntBASIC1.88□□□□□ -2.11
MBD4O95243 RNU6-99P-201ENST00000364721 107 ntBASIC1.88□□□□□ -2.11
MBD4O95243 RNU6-310P-201ENST00000384655 107 ntBASIC1.88□□□□□ -2.11
MBD4O95243 Y_RNA.646-201ENST00000410980 101 ntBASIC1.88□□□□□ -2.11
MBD4O95243 MIR2053-201ENST00000459295 91 ntBASIC1.88□□□□□ -2.11
MBD4O95243 Y_RNA.638-201ENST00000459374 113 ntBASIC1.88□□□□□ -2.11
MBD4O95243 AC005908.1-201ENST00000468701 347 ntBASIC1.88□□□□□ -2.11
MBD4O95243 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.88□□□□□ -2.11
MBD4O95243 AL163195.1-201ENST00000496941 348 ntBASIC1.88□□□□□ -2.11
MBD4O95243 RNU6-559P-201ENST00000516151 98 ntBASIC1.88□□□□□ -2.11
MBD4O95243 MIR4709-201ENST00000577272 72 ntBASIC1.88□□□□□ -2.11
MBD4O95243 MIR4285-201ENST00000581001 85 ntBASIC1.88□□□□□ -2.11
MBD4O95243 AC080078.3-201ENST00000605407 463 ntBASIC1.88□□□□□ -2.11
MBD4O95243 BX248123.2-201ENST00000606318 124 ntBASIC1.88□□□□□ -2.11
MBD4O95243 MIR1244-1-201ENST00000612829 85 ntBASIC1.88□□□□□ -2.11
MBD4O95243 MIR1244-3-201ENST00000635744 85 ntBASIC1.88□□□□□ -2.11
MBD4O95243 MIR1244-2-201ENST00000636449 85 ntBASIC1.88□□□□□ -2.11
MBD4O95243 MIR1244-4-202ENST00000636813 85 ntBASIC1.88□□□□□ -2.11
MBD4O95243 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
MBD4O95243 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
MBD4O95243 RNA5SP361-201ENST00000362686 118 ntBASIC1.87□□□□□ -2.11
MBD4O95243 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
MBD4O95243 RNU6-1297P-201ENST00000384415 104 ntBASIC1.87□□□□□ -2.11
MBD4O95243 SNORA67.5-201ENST00000391036 107 ntBASIC1.87□□□□□ -2.11
MBD4O95243 RNU4-62P-201ENST00000410125 130 ntBASIC1.87□□□□□ -2.11
MBD4O95243 RPS20P15-201ENST00000412792 311 ntBASIC1.87□□□□□ -2.11
MBD4O95243 PCNPP5-201ENST00000452246 481 ntBASIC1.87□□□□□ -2.11
MBD4O95243 Y_RNA.653-201ENST00000459091 95 ntBASIC1.87□□□□□ -2.11
MBD4O95243 RPS26P45-201ENST00000471748 340 ntBASIC1.87□□□□□ -2.11
MBD4O95243 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC1.87□□□□□ -2.11
MBD4O95243 RNA5SP458-201ENST00000516188 119 ntBASIC1.87□□□□□ -2.11
MBD4O95243 AC100821.1-201ENST00000523153 2479 ntBASIC1.87□□□□□ -2.11
MBD4O95243 SNORA77B-201ENST00000578179 125 ntBASIC1.87□□□□□ -2.11
MBD4O95243 AC005730.3-201ENST00000583067 366 ntBASIC1.87□□□□□ -2.11
MBD4O95243 U6.73-201ENST00000619194 103 ntBASIC1.87□□□□□ -2.11
MBD4O95243 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC1.87□□□□□ -2.11
MBD4O95243 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.86□□□□□ -2.11
MBD4O95243 MTCYBP4-201ENST00000401524 249 ntBASIC1.86□□□□□ -2.11
MBD4O95243 AC114482.1-201ENST00000418010 247 ntBASIC1.86□□□□□ -2.11
MBD4O95243 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.86□□□□□ -2.11
MBD4O95243 SNORD65B-201ENST00000459126 73 ntBASIC1.86□□□□□ -2.11
MBD4O95243 U8.22-201ENST00000459141 133 ntBASIC1.86□□□□□ -2.11
MBD4O95243 AC010598.1-201ENST00000510378 103 ntBASIC1.86□□□□□ -2.11
MBD4O95243 RNU7-99P-201ENST00000516271 62 ntBASIC1.86□□□□□ -2.11
MBD4O95243 RNU7-4P-201ENST00000516961 62 ntBASIC1.86□□□□□ -2.11
MBD4O95243 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.86□□□□□ -2.11
MBD4O95243 FRG2DP-202ENST00000566967 323 ntBASIC1.86□□□□□ -2.11
MBD4O95243 MIR4422-201ENST00000581938 83 ntBASIC1.86□□□□□ -2.11
MBD4O95243 U6.108-201ENST00000637764 58 ntBASIC1.86□□□□□ -2.11
MBD4O95243 SNORA72.1-201ENST00000363485 129 ntBASIC1.85□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 127.3 ms