Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 Z98742.2-201ENST00000431564 187 ntBASIC2.78□□□□□ -1.96
CDKL5O76039 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.78□□□□□ -1.96
CDKL5O76039 RPL31P41-201ENST00000477967 372 ntBASIC2.78□□□□□ -1.96
CDKL5O76039 AC074198.2-201ENST00000508153 258 ntBASIC2.78□□□□□ -1.96
CDKL5O76039 RNY3P16-201ENST00000516338 101 ntBASIC2.78□□□□□ -1.96
CDKL5O76039 RNU6-344P-201ENST00000516635 111 ntBASIC2.78□□□□□ -1.96
CDKL5O76039 RNU1-117P-201ENST00000517041 158 ntBASIC2.78□□□□□ -1.96
CDKL5O76039 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.78□□□□□ -1.96
CDKL5O76039 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.78□□□□□ -1.96
CDKL5O76039 MIR3162-201ENST00000581818 82 ntBASIC2.78□□□□□ -1.96
CDKL5O76039 MIR5006-201ENST00000583027 110 ntBASIC2.78□□□□□ -1.96
CDKL5O76039 AC008739.2-201ENST00000597006 317 ntBASIC2.78□□□□□ -1.96
CDKL5O76039 SNORD11B-201ENST00000607707 90 ntBASIC2.78□□□□□ -1.96
CDKL5O76039 TCL6_2.1-201ENST00000615162 119 ntBASIC2.78□□□□□ -1.96
CDKL5O76039 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.78□□□□□ -1.96
CDKL5O76039 AC069528.2-201ENST00000624849 1991 ntBASIC2.78□□□□□ -1.97
CDKL5O76039 RNU6-1020P-201ENST00000363684 107 ntBASIC2.77□□□□□ -1.97
CDKL5O76039 RNU6-1264P-201ENST00000383891 107 ntBASIC2.77□□□□□ -1.97
CDKL5O76039 RNU6-1310P-201ENST00000384153 107 ntBASIC2.77□□□□□ -1.97
CDKL5O76039 Y_RNA.500-201ENST00000384466 111 ntBASIC2.77□□□□□ -1.97
CDKL5O76039 RNU6ATAC15P-201ENST00000408279 121 ntBASIC2.77□□□□□ -1.97
CDKL5O76039 Y_RNA.597-201ENST00000410463 100 ntBASIC2.77□□□□□ -1.97
CDKL5O76039 RNA5SP475-201ENST00000410568 110 ntBASIC2.77□□□□□ -1.97
CDKL5O76039 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.77□□□□□ -1.97
CDKL5O76039 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.77□□□□□ -1.97
CDKL5O76039 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.77□□□□□ -1.97
CDKL5O76039 AC026436.1-201ENST00000510537 270 ntBASIC2.77□□□□□ -1.97
CDKL5O76039 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.77□□□□□ -1.97
CDKL5O76039 RNU6-107P-201ENST00000516643 102 ntBASIC2.77□□□□□ -1.97
CDKL5O76039 RNA5SP402-201ENST00000517148 110 ntBASIC2.77□□□□□ -1.97
CDKL5O76039 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC2.77□□□□□ -1.97
CDKL5O76039 AC006023.1-201ENST00000603944 259 ntBASIC2.77□□□□□ -1.97
CDKL5O76039 AC103810.6-201ENST00000606708 136 ntBASIC2.77□□□□□ -1.97
CDKL5O76039 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.76□□□□□ -1.97
CDKL5O76039 MIR21-201ENST00000362134 72 ntBASIC2.76□□□□□ -1.97
CDKL5O76039 RNU1-105P-201ENST00000363470 161 ntBASIC2.76□□□□□ -1.97
CDKL5O76039 RNU6-923P-201ENST00000364753 107 ntBASIC2.76□□□□□ -1.97
CDKL5O76039 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.76□□□□□ -1.97
CDKL5O76039 AL513328.1-201ENST00000446460 224 ntBASIC2.76□□□□□ -1.97
CDKL5O76039 UBE2DNL-203ENST00000474922 222 ntBASIC2.76□□□□□ -1.97
CDKL5O76039 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.76□□□□□ -1.97
CDKL5O76039 AC234781.5-201ENST00000508429 271 ntBASIC2.76□□□□□ -1.97
CDKL5O76039 RNU2-44P-201ENST00000516795 194 ntBASIC2.76□□□□□ -1.97
CDKL5O76039 RNU6-255P-201ENST00000516957 105 ntBASIC2.76□□□□□ -1.97
CDKL5O76039 RNU2-12P-201ENST00000517216 168 ntBASIC2.76□□□□□ -1.97
CDKL5O76039 HSPE1P18-201ENST00000517602 280 ntBASIC2.76□□□□□ -1.97
CDKL5O76039 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.76□□□□□ -1.97
CDKL5O76039 AC021269.2-201ENST00000532318 330 ntBASIC2.76□□□□□ -1.97
CDKL5O76039 AC027176.1-201ENST00000560204 514 ntBASIC2.76□□□□□ -1.97
CDKL5O76039 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.76□□□□□ -1.97
CDKL5O76039 AC073349.3-201ENST00000617616 186 ntBASIC2.76□□□□□ -1.97
CDKL5O76039 CTSLP2-204ENST00000629029 392 ntBASIC2.76□□□□□ -1.97
CDKL5O76039 AC068205.3-201ENST00000636385 468 ntBASIC2.76□□□□□ -1.97
CDKL5O76039 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
CDKL5O76039 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.76□□□□□ -1.97
CDKL5O76039 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.75□□□□□ -1.97
CDKL5O76039 AL359854.1-201ENST00000614203 1594 ntBASIC2.75□□□□□ -1.97
CDKL5O76039 Y_RNA.329-201ENST00000365209 107 ntBASIC2.75□□□□□ -1.97
CDKL5O76039 Y_RNA.464-201ENST00000384282 110 ntBASIC2.75□□□□□ -1.97
CDKL5O76039 RNU6-918P-201ENST00000391219 106 ntBASIC2.75□□□□□ -1.97
CDKL5O76039 RN7SKP51-201ENST00000410781 304 ntBASIC2.75□□□□□ -1.97
CDKL5O76039 AC007064.1-201ENST00000412238 351 ntBASIC2.75□□□□□ -1.97
CDKL5O76039 EIF4EP4-201ENST00000424916 578 ntBASIC2.75□□□□□ -1.97
CDKL5O76039 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.75□□□□□ -1.97
CDKL5O76039 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.75□□□□□ -1.97
CDKL5O76039 SCARNA17.1-201ENST00000516211 143 ntBASIC2.75□□□□□ -1.97
CDKL5O76039 SCARNA17.2-201ENST00000516334 143 ntBASIC2.75□□□□□ -1.97
CDKL5O76039 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.75□□□□□ -1.97
CDKL5O76039 IGLV3-17-201ENST00000519099 244 ntBASIC2.75□□□□□ -1.97
CDKL5O76039 MIR6895-201ENST00000613497 78 ntBASIC2.75□□□□□ -1.97
CDKL5O76039 SCARNA17.4-201ENST00000614296 143 ntBASIC2.75□□□□□ -1.97
CDKL5O76039 snoU18.1-201ENST00000629629 71 ntBASIC2.75□□□□□ -1.97
CDKL5O76039 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.74□□□□□ -1.97
CDKL5O76039 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.74□□□□□ -1.97
CDKL5O76039 AL136360.1-201ENST00000503377 1900 ntBASIC2.74□□□□□ -1.97
CDKL5O76039 Y_RNA.308-201ENST00000365043 101 ntBASIC2.74□□□□□ -1.97
CDKL5O76039 SNORA80E-201ENST00000384744 137 ntBASIC2.74□□□□□ -1.97
CDKL5O76039 SNORA11.2-201ENST00000408318 127 ntBASIC2.74□□□□□ -1.97
CDKL5O76039 AC097463.2-201ENST00000421074 142 ntBASIC2.74□□□□□ -1.97
CDKL5O76039 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC2.74□□□□□ -1.97
CDKL5O76039 AC011753.1-201ENST00000451001 220 ntBASIC2.74□□□□□ -1.97
CDKL5O76039 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.74□□□□□ -1.97
CDKL5O76039 MRPS36P2-201ENST00000512569 299 ntBASIC2.74□□□□□ -1.97
CDKL5O76039 RNU6-436P-201ENST00000516171 114 ntBASIC2.74□□□□□ -1.97
CDKL5O76039 RNU6-1212P-201ENST00000517023 104 ntBASIC2.74□□□□□ -1.97
CDKL5O76039 AC103810.1-201ENST00000579873 453 ntBASIC2.74□□□□□ -1.97
CDKL5O76039 AL008718.3-201ENST00000610217 321 ntBASIC2.74□□□□□ -1.97
CDKL5O76039 AC110079.1-202ENST00000635213 138 ntBASIC2.74□□□□□ -1.97
CDKL5O76039 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.74□□□□□ -1.97
CDKL5O76039 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
CDKL5O76039 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.74□□□□□ -1.97
CDKL5O76039 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.74□□□□□ -1.97
CDKL5O76039 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.73□□□□□ -1.97
CDKL5O76039 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.73□□□□□ -1.97
CDKL5O76039 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.73□□□□□ -1.97
CDKL5O76039 RNU6-1272P-201ENST00000362776 107 ntBASIC2.73□□□□□ -1.97
CDKL5O76039 RNU6-211P-201ENST00000384047 107 ntBASIC2.73□□□□□ -1.97
CDKL5O76039 SNORA67.2-201ENST00000384300 149 ntBASIC2.73□□□□□ -1.97
CDKL5O76039 RNA5SP354-201ENST00000391247 136 ntBASIC2.73□□□□□ -1.97
CDKL5O76039 U3.40-201ENST00000408706 208 ntBASIC2.73□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms