Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 AL442163.3-201ENST00000554110 156 ntBASIC1.91□□□□□ -2.1
GPC4O75487 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC1.91□□□□□ -2.1
GPC4O75487 AL109918.3-201ENST00000603072 338 ntBASIC1.91□□□□□ -2.1
GPC4O75487 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.91□□□□□ -2.1
GPC4O75487 U1.36-201ENST00000620684 176 ntBASIC1.91□□□□□ -2.1
GPC4O75487 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.91□□□□□ -2.1
GPC4O75487 uc_338.22-201ENST00000622722 187 ntBASIC1.91□□□□□ -2.1
GPC4O75487 MIR4272-201ENST00000635924 64 ntBASIC1.91□□□□□ -2.1
GPC4O75487 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.9□□□□□ -2.1
GPC4O75487 RNU6-797P-201ENST00000363101 109 ntBASIC1.9□□□□□ -2.11
GPC4O75487 MIR676-201ENST00000390702 67 ntBASIC1.9□□□□□ -2.11
GPC4O75487 snoU13.26-201ENST00000459452 105 ntBASIC1.9□□□□□ -2.11
GPC4O75487 AC010409.1-201ENST00000487382 476 ntBASIC1.9□□□□□ -2.11
GPC4O75487 RNU6-976P-201ENST00000516086 111 ntBASIC1.9□□□□□ -2.11
GPC4O75487 RNU6-1153P-201ENST00000516760 105 ntBASIC1.9□□□□□ -2.11
GPC4O75487 AC006600.1-201ENST00000572529 153 ntBASIC1.9□□□□□ -2.11
GPC4O75487 SNRPGP19-201ENST00000603826 189 ntBASIC1.9□□□□□ -2.11
GPC4O75487 SNORD58B-201ENST00000607313 66 ntBASIC1.9□□□□□ -2.11
GPC4O75487 AL353149.1-201ENST00000610667 244 ntBASIC1.9□□□□□ -2.11
GPC4O75487 Y_RNA.31-201ENST00000362574 102 ntBASIC1.89□□□□□ -2.11
GPC4O75487 SNORD114-1-201ENST00000362705 72 ntBASIC1.89□□□□□ -2.11
GPC4O75487 snoU2-30.2-201ENST00000362805 70 ntBASIC1.89□□□□□ -2.11
GPC4O75487 RNU6-961P-201ENST00000363893 105 ntBASIC1.89□□□□□ -2.11
GPC4O75487 RNU1-96P-201ENST00000364163 162 ntBASIC1.89□□□□□ -2.11
GPC4O75487 RNU6-1240P-201ENST00000365155 104 ntBASIC1.89□□□□□ -2.11
GPC4O75487 Y_RNA.395-201ENST00000383945 109 ntBASIC1.89□□□□□ -2.11
GPC4O75487 RNY1P14-201ENST00000384426 108 ntBASIC1.89□□□□□ -2.11
GPC4O75487 Y_RNA.498-201ENST00000384460 102 ntBASIC1.89□□□□□ -2.11
GPC4O75487 AC244636.1-201ENST00000421152 228 ntBASIC1.89□□□□□ -2.11
GPC4O75487 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.89□□□□□ -2.11
GPC4O75487 AC074133.1-201ENST00000515696 183 ntBASIC1.89□□□□□ -2.11
GPC4O75487 CYCSP23-201ENST00000519781 313 ntBASIC1.89□□□□□ -2.11
GPC4O75487 AL627230.6-201ENST00000611129 280 ntBASIC1.89□□□□□ -2.11
GPC4O75487 AC007485.1-201ENST00000616755 206 ntBASIC1.89□□□□□ -2.11
GPC4O75487 AL160413.1-201ENST00000622780 310 ntBASIC1.89□□□□□ -2.11
GPC4O75487 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.89□□□□□ -2.11
GPC4O75487 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.89□□□□□ -2.11
GPC4O75487 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.88□□□□□ -2.11
GPC4O75487 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.88□□□□□ -2.11
GPC4O75487 RNU6-454P-201ENST00000364292 107 ntBASIC1.88□□□□□ -2.11
GPC4O75487 RNY3P4-201ENST00000384428 101 ntBASIC1.88□□□□□ -2.11
GPC4O75487 RNA5SP212-201ENST00000391223 107 ntBASIC1.88□□□□□ -2.11
GPC4O75487 RNA5SP467-201ENST00000391274 118 ntBASIC1.88□□□□□ -2.11
GPC4O75487 RAB28P5-201ENST00000427490 651 ntBASIC1.88□□□□□ -2.11
GPC4O75487 AC245047.4-201ENST00000433189 144 ntBASIC1.88□□□□□ -2.11
GPC4O75487 AC007677.1-201ENST00000445757 515 ntBASIC1.88□□□□□ -2.11
GPC4O75487 Y_RNA.639-201ENST00000458981 102 ntBASIC1.88□□□□□ -2.11
GPC4O75487 SNORD65B-201ENST00000459126 73 ntBASIC1.88□□□□□ -2.11
GPC4O75487 RNU6-625P-201ENST00000459412 107 ntBASIC1.88□□□□□ -2.11
GPC4O75487 RNA5SP57-201ENST00000459463 123 ntBASIC1.88□□□□□ -2.11
GPC4O75487 RPL26P26-201ENST00000480251 434 ntBASIC1.88□□□□□ -2.11
GPC4O75487 AC010469.2-201ENST00000496412 480 ntBASIC1.88□□□□□ -2.11
GPC4O75487 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.88□□□□□ -2.11
GPC4O75487 RNU6-408P-201ENST00000515910 100 ntBASIC1.88□□□□□ -2.11
GPC4O75487 RNU6-1170P-201ENST00000515974 106 ntBASIC1.88□□□□□ -2.11
GPC4O75487 MIR3122-201ENST00000577243 73 ntBASIC1.88□□□□□ -2.11
GPC4O75487 MIR5188-201ENST00000583467 113 ntBASIC1.88□□□□□ -2.11
GPC4O75487 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.88□□□□□ -2.11
GPC4O75487 AC011476.5-201ENST00000615594 130 ntBASIC1.88□□□□□ -2.11
GPC4O75487 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.88□□□□□ -2.11
GPC4O75487 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.87□□□□□ -2.11
GPC4O75487 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
GPC4O75487 Y_RNA.112-201ENST00000363250 102 ntBASIC1.87□□□□□ -2.11
GPC4O75487 RNU6-112P-201ENST00000363599 104 ntBASIC1.87□□□□□ -2.11
GPC4O75487 RNU6-1264P-201ENST00000383891 107 ntBASIC1.87□□□□□ -2.11
GPC4O75487 Y_RNA.431-201ENST00000384086 102 ntBASIC1.87□□□□□ -2.11
GPC4O75487 RNU6-474P-201ENST00000384243 107 ntBASIC1.87□□□□□ -2.11
GPC4O75487 AC009310.1-201ENST00000414414 451 ntBASIC1.87□□□□□ -2.11
GPC4O75487 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.87□□□□□ -2.11
GPC4O75487 HMGN2P19-201ENST00000425149 265 ntBASIC1.87□□□□□ -2.11
GPC4O75487 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.87□□□□□ -2.11
GPC4O75487 UBL5P3-201ENST00000475112 231 ntBASIC1.87□□□□□ -2.11
GPC4O75487 HMGN1P13-201ENST00000505795 138 ntBASIC1.87□□□□□ -2.11
GPC4O75487 RNU6-911P-201ENST00000516523 104 ntBASIC1.87□□□□□ -2.11
GPC4O75487 RNU6-1012P-201ENST00000516606 109 ntBASIC1.87□□□□□ -2.11
GPC4O75487 AC084364.2-201ENST00000546924 395 ntBASIC1.87□□□□□ -2.11
GPC4O75487 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.87□□□□□ -2.11
GPC4O75487 AC022254.1-201ENST00000567857 235 ntBASIC1.87□□□□□ -2.11
GPC4O75487 AC055872.1-201ENST00000570978 278 ntBASIC1.87□□□□□ -2.11
GPC4O75487 VN1R91P-201ENST00000594377 169 ntBASIC1.87□□□□□ -2.11
GPC4O75487 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.87□□□□□ -2.11
GPC4O75487 AC006157.1-201ENST00000611750 366 ntBASIC1.87□□□□□ -2.11
GPC4O75487 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.87□□□□□ -2.11
GPC4O75487 AC090574.1-201ENST00000623186 233 ntBASIC1.87□□□□□ -2.11
GPC4O75487 AC008555.8-201ENST00000623602 2168 ntBASIC1.87□□□□□ -2.11
GPC4O75487 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
GPC4O75487 Y_RNA.138-201ENST00000363462 102 ntBASIC1.86□□□□□ -2.11
GPC4O75487 RNU6-296P-201ENST00000384608 107 ntBASIC1.86□□□□□ -2.11
GPC4O75487 MIR1253-201ENST00000408273 105 ntBASIC1.86□□□□□ -2.11
GPC4O75487 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.86□□□□□ -2.11
GPC4O75487 AC008134.1-201ENST00000420943 193 ntBASIC1.86□□□□□ -2.11
GPC4O75487 RPL31P63-201ENST00000422565 375 ntBASIC1.86□□□□□ -2.11
GPC4O75487 TOMM22P2-201ENST00000430735 237 ntBASIC1.86□□□□□ -2.11
GPC4O75487 AL160004.2-201ENST00000432935 350 ntBASIC1.86□□□□□ -2.11
GPC4O75487 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.86□□□□□ -2.11
GPC4O75487 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.86□□□□□ -2.11
GPC4O75487 RPL23AP6-201ENST00000446637 472 ntBASIC1.86□□□□□ -2.11
GPC4O75487 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.86□□□□□ -2.11
GPC4O75487 RPL23AP63-201ENST00000498752 471 ntBASIC1.86□□□□□ -2.11
GPC4O75487 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.86□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 142.7 ms