Protein–RNA interactions for Protein: O75400

PRPF40A, Pre-mRNA-processing factor 40 homolog A, humanhuman

Known RBP Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40AO75400 AC003685.2-201ENST00000422795 395 ntBASIC3.45□□□□□ -1.86
PRPF40AO75400 HSPE1P21-201ENST00000438283 308 ntBASIC3.45□□□□□ -1.86
PRPF40AO75400 SNORA4.4-201ENST00000515921 135 ntBASIC3.45□□□□□ -1.86
PRPF40AO75400 SNORA31.26-201ENST00000517250 137 ntBASIC3.45□□□□□ -1.86
PRPF40AO75400 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC3.45□□□□□ -1.86
PRPF40AO75400 CARD18-203ENST00000532895 422 ntTSL 2 BASIC3.45□□□□□ -1.86
PRPF40AO75400 AC007536.1-201ENST00000533382 349 ntBASIC3.45□□□□□ -1.86
PRPF40AO75400 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
PRPF40AO75400 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.45□□□□□ -1.86
PRPF40AO75400 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC3.44□□□□□ -1.86
PRPF40AO75400 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3.44□□□□□ -1.86
PRPF40AO75400 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.44□□□□□ -1.86
PRPF40AO75400 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
PRPF40AO75400 RNA5SP374-201ENST00000362939 125 ntBASIC3.44□□□□□ -1.86
PRPF40AO75400 RNU6-1240P-201ENST00000365155 104 ntBASIC3.44□□□□□ -1.86
PRPF40AO75400 Y_RNA.435-201ENST00000384095 112 ntBASIC3.44□□□□□ -1.86
PRPF40AO75400 MIR181A2-201ENST00000384863 110 ntBASIC3.44□□□□□ -1.86
PRPF40AO75400 SNORA48.2-201ENST00000390926 124 ntBASIC3.44□□□□□ -1.86
PRPF40AO75400 AC123900.1-201ENST00000420390 96 ntBASIC3.44□□□□□ -1.86
PRPF40AO75400 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.44□□□□□ -1.86
PRPF40AO75400 MTND2P29-201ENST00000438595 412 ntBASIC3.44□□□□□ -1.86
PRPF40AO75400 HSPE1P13-201ENST00000451143 297 ntBASIC3.44□□□□□ -1.86
PRPF40AO75400 RN7SL863P-201ENST00000462370 296 ntBASIC3.44□□□□□ -1.86
PRPF40AO75400 AC010531.2-201ENST00000465012 153 ntBASIC3.44□□□□□ -1.86
PRPF40AO75400 RPS26P55-201ENST00000471178 356 ntBASIC3.44□□□□□ -1.86
PRPF40AO75400 AC093259.1-201ENST00000509755 300 ntBASIC3.44□□□□□ -1.86
PRPF40AO75400 RNU6-1337P-201ENST00000516525 95 ntBASIC3.44□□□□□ -1.86
PRPF40AO75400 RNU6-667P-201ENST00000517186 102 ntBASIC3.44□□□□□ -1.86
PRPF40AO75400 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.44□□□□□ -1.86
PRPF40AO75400 MIR5004-201ENST00000579078 107 ntBASIC3.44□□□□□ -1.86
PRPF40AO75400 AC090115.4-201ENST00000609970 188 ntBASIC3.44□□□□□ -1.86
PRPF40AO75400 AL449363.1-201ENST00000617815 186 ntBASIC3.44□□□□□ -1.86
PRPF40AO75400 MIR622-201ENST00000638396 96 ntBASIC3.44□□□□□ -1.86
PRPF40AO75400 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
PRPF40AO75400 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
PRPF40AO75400 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.44□□□□□ -1.86
PRPF40AO75400 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.44□□□□□ -1.86
PRPF40AO75400 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
PRPF40AO75400 RNU1-35P-201ENST00000362782 153 ntBASIC3.43□□□□□ -1.86
PRPF40AO75400 SNORA7.4-201ENST00000384249 137 ntBASIC3.43□□□□□ -1.86
PRPF40AO75400 Y_RNA.464-201ENST00000384282 110 ntBASIC3.43□□□□□ -1.86
PRPF40AO75400 MIR627-201ENST00000384979 97 ntBASIC3.43□□□□□ -1.86
PRPF40AO75400 AL031121.1-201ENST00000406553 254 ntBASIC3.43□□□□□ -1.86
PRPF40AO75400 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.43□□□□□ -1.86
PRPF40AO75400 AC010154.1-201ENST00000425857 269 ntBASIC3.43□□□□□ -1.86
PRPF40AO75400 AL445687.1-201ENST00000439946 251 ntBASIC3.43□□□□□ -1.86
PRPF40AO75400 AL357134.1-201ENST00000445848 426 ntBASIC3.43□□□□□ -1.86
PRPF40AO75400 RPS20P10-201ENST00000451209 253 ntBASIC3.43□□□□□ -1.86
PRPF40AO75400 AC010409.1-201ENST00000487382 476 ntBASIC3.43□□□□□ -1.86
PRPF40AO75400 RNA5SP20-201ENST00000515976 84 ntBASIC3.43□□□□□ -1.86
PRPF40AO75400 AC100767.1-201ENST00000528178 123 ntBASIC3.43□□□□□ -1.86
PRPF40AO75400 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC3.43□□□□□ -1.86
PRPF40AO75400 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
PRPF40AO75400 AC005000.2-201ENST00000605468 310 ntBASIC3.43□□□□□ -1.86
PRPF40AO75400 AC006435.5-201ENST00000624486 112 ntBASIC3.43□□□□□ -1.86
PRPF40AO75400 U6.106-201ENST00000636360 105 ntBASIC3.43□□□□□ -1.86
PRPF40AO75400 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC3.43□□□□□ -1.86
PRPF40AO75400 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
PRPF40AO75400 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
PRPF40AO75400 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
PRPF40AO75400 RNU6-1205P-201ENST00000363625 106 ntBASIC3.42□□□□□ -1.86
PRPF40AO75400 MIR518C-201ENST00000384822 101 ntBASIC3.42□□□□□ -1.86
PRPF40AO75400 MIR128-1-201ENST00000384921 82 ntBASIC3.42□□□□□ -1.86
PRPF40AO75400 AL355497.1-201ENST00000406262 551 ntBASIC3.42□□□□□ -1.86
PRPF40AO75400 SNORD88.1-201ENST00000408684 91 ntBASIC3.42□□□□□ -1.86
PRPF40AO75400 Z92545.1-201ENST00000411782 234 ntBASIC3.42□□□□□ -1.86
PRPF40AO75400 RNU7-141P-201ENST00000459304 62 ntBASIC3.42□□□□□ -1.86
PRPF40AO75400 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC3.42□□□□□ -1.86
PRPF40AO75400 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC3.42□□□□□ -1.86
PRPF40AO75400 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.42□□□□□ -1.86
PRPF40AO75400 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
PRPF40AO75400 Y_RNA.7-201ENST00000362352 102 ntBASIC3.41□□□□□ -1.86
PRPF40AO75400 Y_RNA.332-201ENST00000365271 113 ntBASIC3.41□□□□□ -1.86
PRPF40AO75400 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
PRPF40AO75400 Y_RNA.571-201ENST00000384753 98 ntBASIC3.41□□□□□ -1.86
PRPF40AO75400 MTCO1P44-201ENST00000441935 243 ntBASIC3.41□□□□□ -1.86
PRPF40AO75400 RPS27P22-201ENST00000478056 241 ntBASIC3.41□□□□□ -1.86
PRPF40AO75400 AC074198.2-201ENST00000508153 258 ntBASIC3.41□□□□□ -1.86
PRPF40AO75400 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.41□□□□□ -1.86
PRPF40AO75400 RNU6-1219P-201ENST00000516143 112 ntBASIC3.41□□□□□ -1.86
PRPF40AO75400 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.41□□□□□ -1.86
PRPF40AO75400 AC090616.3-201ENST00000582184 217 ntBASIC3.41□□□□□ -1.86
PRPF40AO75400 AC068647.2-201ENST00000637380 353 ntBASIC3.41□□□□□ -1.86
PRPF40AO75400 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.41□□□□□ -1.86
PRPF40AO75400 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.4□□□□□ -1.86
PRPF40AO75400 Y_RNA.240-201ENST00000364469 95 ntBASIC3.4□□□□□ -1.87
PRPF40AO75400 SNORA8.3-201ENST00000384679 139 ntBASIC3.4□□□□□ -1.87
PRPF40AO75400 MIR592-201ENST00000384959 97 ntBASIC3.4□□□□□ -1.87
PRPF40AO75400 MIR1253-201ENST00000408273 105 ntBASIC3.4□□□□□ -1.87
PRPF40AO75400 RNU2-48P-201ENST00000410694 191 ntBASIC3.4□□□□□ -1.87
PRPF40AO75400 RN7SKP51-201ENST00000410781 304 ntBASIC3.4□□□□□ -1.87
PRPF40AO75400 AC016909.1-201ENST00000415916 166 ntBASIC3.4□□□□□ -1.87
PRPF40AO75400 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC3.4□□□□□ -1.87
PRPF40AO75400 Z96811.1-201ENST00000445880 108 ntBASIC3.4□□□□□ -1.87
PRPF40AO75400 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC3.4□□□□□ -1.87
PRPF40AO75400 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.4□□□□□ -1.87
PRPF40AO75400 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.4□□□□□ -1.87
PRPF40AO75400 Y_RNA.802-201ENST00000614892 130 ntBASIC3.4□□□□□ -1.87
PRPF40AO75400 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.4□□□□□ -1.87
PRPF40AO75400 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 210.4 ms