Protein–RNA interactions for Protein: O75351

VPS4B, Vacuolar protein sorting-associated protein 4B, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4BO75351 RNA5SP24-201ENST00000516478 95 ntBASIC2.6□□□□□ -1.99
VPS4BO75351 MIR5092-201ENST00000583139 88 ntBASIC2.6□□□□□ -1.99
VPS4BO75351 AC090425.1-201ENST00000610007 140 ntBASIC2.6□□□□□ -1.99
VPS4BO75351 AC006001.4-201ENST00000622243 395 ntBASIC2.6□□□□□ -1.99
VPS4BO75351 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
VPS4BO75351 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
VPS4BO75351 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.6□□□□□ -1.99
VPS4BO75351 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC2.6□□□□□ -1.99
VPS4BO75351 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.59□□□□□ -1.99
VPS4BO75351 UBE2WP1-201ENST00000362030 340 ntBASIC2.59□□□□□ -1.99
VPS4BO75351 RNU6-975P-201ENST00000384296 105 ntBASIC2.59□□□□□ -1.99
VPS4BO75351 Y_RNA.477-201ENST00000384352 108 ntBASIC2.59□□□□□ -1.99
VPS4BO75351 Y_RNA.552-201ENST00000384665 112 ntBASIC2.59□□□□□ -1.99
VPS4BO75351 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.59□□□□□ -1.99
VPS4BO75351 HMGN2P18-201ENST00000450680 270 ntBASIC2.59□□□□□ -1.99
VPS4BO75351 RNU6-107P-201ENST00000516643 102 ntBASIC2.59□□□□□ -1.99
VPS4BO75351 SCARNA24.2-201ENST00000516968 130 ntBASIC2.59□□□□□ -1.99
VPS4BO75351 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
VPS4BO75351 BX284668.6-201ENST00000606899 438 ntBASIC2.59□□□□□ -1.99
VPS4BO75351 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -2
VPS4BO75351 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.59□□□□□ -2
VPS4BO75351 RNU6-1266P-201ENST00000362794 105 ntBASIC2.58□□□□□ -2
VPS4BO75351 SNORD115-30-201ENST00000364117 82 ntBASIC2.58□□□□□ -2
VPS4BO75351 DEFA7P-201ENST00000382676 285 ntBASIC2.58□□□□□ -2
VPS4BO75351 MIR561-201ENST00000385216 97 ntBASIC2.58□□□□□ -2
VPS4BO75351 MTCO1P5-201ENST00000433573 344 ntBASIC2.58□□□□□ -2
VPS4BO75351 POLR2KP2-201ENST00000438155 177 ntBASIC2.58□□□□□ -2
VPS4BO75351 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.58□□□□□ -2
VPS4BO75351 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC2.58□□□□□ -2
VPS4BO75351 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC2.58□□□□□ -2
VPS4BO75351 RNU1-41P-201ENST00000516161 162 ntBASIC2.58□□□□□ -2
VPS4BO75351 RNU6-436P-201ENST00000516171 114 ntBASIC2.58□□□□□ -2
VPS4BO75351 RNU6-155P-201ENST00000516347 100 ntBASIC2.58□□□□□ -2
VPS4BO75351 RNU1-48P-201ENST00000516400 162 ntBASIC2.58□□□□□ -2
VPS4BO75351 RNU6-111P-201ENST00000517179 105 ntBASIC2.58□□□□□ -2
VPS4BO75351 MIR3684-201ENST00000579779 74 ntBASIC2.58□□□□□ -2
VPS4BO75351 SNORD53-201ENST00000579969 78 ntBASIC2.58□□□□□ -2
VPS4BO75351 MIR4635-201ENST00000583759 79 ntBASIC2.58□□□□□ -2
VPS4BO75351 AC078938.1-201ENST00000620993 318 ntBASIC2.58□□□□□ -2
VPS4BO75351 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC2.58□□□□□ -2
VPS4BO75351 AC135776.4-201ENST00000624300 1904 ntBASIC2.58□□□□□ -2
VPS4BO75351 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.57□□□□□ -2
VPS4BO75351 RNA5SP125-201ENST00000364843 120 ntBASIC2.57□□□□□ -2
VPS4BO75351 Y_RNA.332-201ENST00000365271 113 ntBASIC2.57□□□□□ -2
VPS4BO75351 MIR9-1-201ENST00000385198 89 ntBASIC2.57□□□□□ -2
VPS4BO75351 AL138827.1-201ENST00000402666 306 ntBASIC2.57□□□□□ -2
VPS4BO75351 U3.40-201ENST00000408706 208 ntBASIC2.57□□□□□ -2
VPS4BO75351 RNA5SP21-201ENST00000410917 96 ntBASIC2.57□□□□□ -2
VPS4BO75351 MRPS10P1-201ENST00000448483 130 ntBASIC2.57□□□□□ -2
VPS4BO75351 RNU6-221P-201ENST00000459541 99 ntBASIC2.57□□□□□ -2
VPS4BO75351 AC114982.1-201ENST00000469402 321 ntBASIC2.57□□□□□ -2
VPS4BO75351 AC093259.1-201ENST00000509755 300 ntBASIC2.57□□□□□ -2
VPS4BO75351 RNU6-965P-201ENST00000516721 96 ntBASIC2.57□□□□□ -2
VPS4BO75351 PRELID2P1-201ENST00000552837 301 ntBASIC2.57□□□□□ -2
VPS4BO75351 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.57□□□□□ -2
VPS4BO75351 MIR4643-201ENST00000577473 78 ntBASIC2.57□□□□□ -2
VPS4BO75351 MIR4753-201ENST00000585119 83 ntBASIC2.57□□□□□ -2
VPS4BO75351 AC006380.1-201ENST00000603598 186 ntBASIC2.57□□□□□ -2
VPS4BO75351 AL355297.2-201ENST00000604792 129 ntBASIC2.57□□□□□ -2
VPS4BO75351 AL449363.1-201ENST00000617815 186 ntBASIC2.57□□□□□ -2
VPS4BO75351 U6.115-201ENST00000636045 103 ntBASIC2.57□□□□□ -2
VPS4BO75351 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.56□□□□□ -2
VPS4BO75351 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.56□□□□□ -2
VPS4BO75351 AP006437.1-201ENST00000641440 3685 ntBASIC2.56□□□□□ -2
VPS4BO75351 MIR6073-201ENST00000352083 89 ntBASIC2.56□□□□□ -2
VPS4BO75351 Y_RNA.44-201ENST00000362676 108 ntBASIC2.56□□□□□ -2
VPS4BO75351 RNA5SP68-201ENST00000363885 119 ntBASIC2.56□□□□□ -2
VPS4BO75351 AL357139.1-201ENST00000407792 426 ntBASIC2.56□□□□□ -2
VPS4BO75351 RNU2-14P-201ENST00000411053 191 ntBASIC2.56□□□□□ -2
VPS4BO75351 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.56□□□□□ -2
VPS4BO75351 RPS12P2-201ENST00000439728 269 ntBASIC2.56□□□□□ -2
VPS4BO75351 RNU7-57P-201ENST00000459540 60 ntBASIC2.56□□□□□ -2
VPS4BO75351 CKS1BP2-201ENST00000497342 240 ntBASIC2.56□□□□□ -2
VPS4BO75351 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.56□□□□□ -2
VPS4BO75351 SNORA27.4-201ENST00000516650 95 ntBASIC2.56□□□□□ -2
VPS4BO75351 MIR4446-201ENST00000578505 67 ntBASIC2.56□□□□□ -2
VPS4BO75351 MIR3668-201ENST00000582138 75 ntBASIC2.56□□□□□ -2
VPS4BO75351 AC037487.3-201ENST00000606668 112 ntBASIC2.56□□□□□ -2
VPS4BO75351 MIR6817-201ENST00000615588 66 ntBASIC2.56□□□□□ -2
VPS4BO75351 U4atac.1-201ENST00000618345 95 ntBASIC2.56□□□□□ -2
VPS4BO75351 FO624990.1-201ENST00000636373 85 ntBASIC2.56□□□□□ -2
VPS4BO75351 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.56□□□□□ -2
VPS4BO75351 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
VPS4BO75351 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.55□□□□□ -2
VPS4BO75351 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.55□□□□□ -2
VPS4BO75351 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
VPS4BO75351 SNORD114-7-201ENST00000362520 77 ntBASIC2.55□□□□□ -2
VPS4BO75351 RNA5SP393-201ENST00000363423 117 ntBASIC2.55□□□□□ -2
VPS4BO75351 Y_RNA.275-201ENST00000364726 110 ntBASIC2.55□□□□□ -2
VPS4BO75351 Y_RNA.277-201ENST00000364754 102 ntBASIC2.55□□□□□ -2
VPS4BO75351 RNA5SP210-201ENST00000391034 120 ntBASIC2.55□□□□□ -2
VPS4BO75351 SUMO1P4-201ENST00000429430 302 ntBASIC2.55□□□□□ -2
VPS4BO75351 MTCO1P44-201ENST00000441935 243 ntBASIC2.55□□□□□ -2
VPS4BO75351 AC074290.1-201ENST00000448883 135 ntBASIC2.55□□□□□ -2
VPS4BO75351 SUMO1P2-201ENST00000452524 304 ntBASIC2.55□□□□□ -2
VPS4BO75351 AC091959.1-201ENST00000495857 238 ntBASIC2.55□□□□□ -2
VPS4BO75351 AC096725.1-201ENST00000514266 313 ntBASIC2.55□□□□□ -2
VPS4BO75351 RNU2-34P-201ENST00000516534 121 ntBASIC2.55□□□□□ -2
VPS4BO75351 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC2.55□□□□□ -2
VPS4BO75351 MIR4282-201ENST00000583613 67 ntBASIC2.55□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 203 ms