Protein–RNA interactions for Protein: O75127

PTCD1, Pentatricopeptide repeat-containing protein 1, mitochondrial, humanhuman

Known RBP Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1O75127 Y_RNA.630-201ENST00000411370 108 ntBASIC3.93□□□□□ -1.78
PTCD1O75127 MTCO1P44-201ENST00000441935 243 ntBASIC3.93□□□□□ -1.78
PTCD1O75127 AL121914.1-201ENST00000450188 156 ntBASIC3.93□□□□□ -1.78
PTCD1O75127 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC3.93□□□□□ -1.78
PTCD1O75127 HMGN2P9-201ENST00000476875 229 ntBASIC3.93□□□□□ -1.78
PTCD1O75127 SNORA70.12-201ENST00000516084 153 ntBASIC3.93□□□□□ -1.78
PTCD1O75127 RNA5SP367-201ENST00000516557 118 ntBASIC3.93□□□□□ -1.78
PTCD1O75127 snoZ196.1-201ENST00000625269 89 ntBASIC3.93□□□□□ -1.78
PTCD1O75127 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.93□□□□□ -1.78
PTCD1O75127 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.93□□□□□ -1.78
PTCD1O75127 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
PTCD1O75127 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.92□□□□□ -1.78
PTCD1O75127 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC3.92□□□□□ -1.78
PTCD1O75127 RNU6-486P-201ENST00000363116 107 ntBASIC3.92□□□□□ -1.78
PTCD1O75127 RNU6-1164P-201ENST00000364428 107 ntBASIC3.92□□□□□ -1.78
PTCD1O75127 Y_RNA.368-201ENST00000365547 113 ntBASIC3.92□□□□□ -1.78
PTCD1O75127 RNU6-301P-201ENST00000384277 107 ntBASIC3.92□□□□□ -1.78
PTCD1O75127 SNORA8.3-201ENST00000384679 139 ntBASIC3.92□□□□□ -1.78
PTCD1O75127 MIR15B-201ENST00000385045 98 ntBASIC3.92□□□□□ -1.78
PTCD1O75127 MIR1294-201ENST00000408503 142 ntBASIC3.92□□□□□ -1.78
PTCD1O75127 AC002064.3-201ENST00000623448 346 ntBASIC3.92□□□□□ -1.78
PTCD1O75127 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.92□□□□□ -1.78
PTCD1O75127 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
PTCD1O75127 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.92□□□□□ -1.78
PTCD1O75127 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.92□□□□□ -1.78
PTCD1O75127 Y_RNA.456-201ENST00000384232 111 ntBASIC3.91□□□□□ -1.78
PTCD1O75127 MIR616-201ENST00000385293 97 ntBASIC3.91□□□□□ -1.78
PTCD1O75127 MIR1185-2-201ENST00000408687 86 ntBASIC3.91□□□□□ -1.78
PTCD1O75127 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC3.91□□□□□ -1.78
PTCD1O75127 MIR3124-201ENST00000582636 67 ntBASIC3.91□□□□□ -1.78
PTCD1O75127 MIR4753-201ENST00000585119 83 ntBASIC3.91□□□□□ -1.78
PTCD1O75127 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.91□□□□□ -1.78
PTCD1O75127 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.91□□□□□ -1.78
PTCD1O75127 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.91□□□□□ -1.78
PTCD1O75127 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.91□□□□□ -1.78
PTCD1O75127 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.9□□□□□ -1.78
PTCD1O75127 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
PTCD1O75127 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.9□□□□□ -1.79
PTCD1O75127 RNU6-1082P-201ENST00000364574 107 ntBASIC3.9□□□□□ -1.79
PTCD1O75127 RNU6-1336P-201ENST00000383886 109 ntBASIC3.9□□□□□ -1.79
PTCD1O75127 AL512604.1-201ENST00000404812 257 ntBASIC3.9□□□□□ -1.79
PTCD1O75127 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.9□□□□□ -1.79
PTCD1O75127 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.9□□□□□ -1.79
PTCD1O75127 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC3.9□□□□□ -1.79
PTCD1O75127 SNORD59.2-201ENST00000516873 68 ntBASIC3.9□□□□□ -1.79
PTCD1O75127 SCARNA20.6-201ENST00000517251 106 ntBASIC3.9□□□□□ -1.79
PTCD1O75127 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.9□□□□□ -1.79
PTCD1O75127 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC3.9□□□□□ -1.79
PTCD1O75127 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.9□□□□□ -1.79
PTCD1O75127 AC025754.2-201ENST00000606491 432 ntBASIC3.9□□□□□ -1.79
PTCD1O75127 AC099778.2-201ENST00000610904 211 ntBASIC3.9□□□□□ -1.79
PTCD1O75127 Six3os1_7.1-201ENST00000621512 201 ntBASIC3.9□□□□□ -1.79
PTCD1O75127 MIR6844-201ENST00000637122 62 ntBASIC3.9□□□□□ -1.79
PTCD1O75127 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
PTCD1O75127 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
PTCD1O75127 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.89□□□□□ -1.79
PTCD1O75127 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC3.89□□□□□ -1.79
PTCD1O75127 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.89□□□□□ -1.79
PTCD1O75127 MIR450A1-201ENST00000362262 91 ntBASIC3.89□□□□□ -1.79
PTCD1O75127 RNU6-1205P-201ENST00000363625 106 ntBASIC3.89□□□□□ -1.79
PTCD1O75127 RNU6-944P-201ENST00000364023 107 ntBASIC3.89□□□□□ -1.79
PTCD1O75127 Y_RNA.310-201ENST00000365063 113 ntBASIC3.89□□□□□ -1.79
PTCD1O75127 SNORD14D-201ENST00000384390 87 ntBASIC3.89□□□□□ -1.79
PTCD1O75127 RNU6-1274P-201ENST00000384557 107 ntBASIC3.89□□□□□ -1.79
PTCD1O75127 RNU1-101P-201ENST00000391171 127 ntBASIC3.89□□□□□ -1.79
PTCD1O75127 AL139095.1-201ENST00000404326 391 ntBASIC3.89□□□□□ -1.79
PTCD1O75127 MIR1283-1-201ENST00000408494 87 ntBASIC3.89□□□□□ -1.79
PTCD1O75127 HSPE1P21-201ENST00000438283 308 ntBASIC3.89□□□□□ -1.79
PTCD1O75127 AC108938.1-201ENST00000451204 136 ntBASIC3.89□□□□□ -1.79
PTCD1O75127 RNU7-141P-201ENST00000459304 62 ntBASIC3.89□□□□□ -1.79
PTCD1O75127 RNU7-57P-201ENST00000459540 60 ntBASIC3.89□□□□□ -1.79
PTCD1O75127 SCGB1D5P-201ENST00000515134 247 ntBASIC3.89□□□□□ -1.79
PTCD1O75127 MIR4425-201ENST00000580572 84 ntBASIC3.89□□□□□ -1.79
PTCD1O75127 ELOCP29-201ENST00000588193 334 ntBASIC3.89□□□□□ -1.79
PTCD1O75127 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.89□□□□□ -1.79
PTCD1O75127 AC091564.4-201ENST00000533934 2194 ntBASIC3.89□□□□□ -1.79
PTCD1O75127 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
PTCD1O75127 Y_RNA.35-201ENST00000362601 101 ntBASIC3.88□□□□□ -1.79
PTCD1O75127 MIR300-201ENST00000401138 83 ntBASIC3.88□□□□□ -1.79
PTCD1O75127 AL355497.1-201ENST00000406262 551 ntBASIC3.88□□□□□ -1.79
PTCD1O75127 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
PTCD1O75127 HSPE1P13-201ENST00000451143 297 ntBASIC3.88□□□□□ -1.79
PTCD1O75127 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC3.88□□□□□ -1.79
PTCD1O75127 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC3.88□□□□□ -1.79
PTCD1O75127 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.88□□□□□ -1.79
PTCD1O75127 MIR4319-201ENST00000577285 85 ntBASIC3.88□□□□□ -1.79
PTCD1O75127 MIR5047-201ENST00000579212 100 ntBASIC3.88□□□□□ -1.79
PTCD1O75127 MIR3162-201ENST00000581818 82 ntBASIC3.88□□□□□ -1.79
PTCD1O75127 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.88□□□□□ -1.79
PTCD1O75127 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
PTCD1O75127 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.88□□□□□ -1.79
PTCD1O75127 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.88□□□□□ -1.79
PTCD1O75127 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.87□□□□□ -1.79
PTCD1O75127 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.87□□□□□ -1.79
PTCD1O75127 ANKRD20A9P-201ENST00000457997 2978 ntBASIC3.87□□□□□ -1.79
PTCD1O75127 AC073325.2-201ENST00000339545 159 ntBASIC3.87□□□□□ -1.79
PTCD1O75127 RNA5SP502-201ENST00000362694 119 ntBASIC3.87□□□□□ -1.79
PTCD1O75127 Y_RNA.124-201ENST00000363339 93 ntBASIC3.87□□□□□ -1.79
PTCD1O75127 Y_RNA.229-201ENST00000364347 113 ntBASIC3.87□□□□□ -1.79
PTCD1O75127 Y_RNA.361-201ENST00000365515 120 ntBASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms