Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 SCARNA16.3-201ENST00000516595 184 ntBASIC2.57□□□□□ -2
CTNND1O60716 RNU6-856P-201ENST00000516959 98 ntBASIC2.57□□□□□ -2
CTNND1O60716 AL049779.4-201ENST00000604500 156 ntBASIC2.57□□□□□ -2
CTNND1O60716 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.56□□□□□ -2
CTNND1O60716 RNU1-58P-201ENST00000362413 163 ntBASIC2.56□□□□□ -2
CTNND1O60716 RNA5SP493-201ENST00000364115 91 ntBASIC2.56□□□□□ -2
CTNND1O60716 SNORA63C-201ENST00000364578 129 ntBASIC2.56□□□□□ -2
CTNND1O60716 MIR518A2-201ENST00000384966 87 ntBASIC2.56□□□□□ -2
CTNND1O60716 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC2.56□□□□□ -2
CTNND1O60716 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.56□□□□□ -2
CTNND1O60716 AL109918.3-201ENST00000603072 338 ntBASIC2.56□□□□□ -2
CTNND1O60716 AL355297.3-201ENST00000604082 446 ntBASIC2.56□□□□□ -2
CTNND1O60716 AL021879.1-201ENST00000611756 288 ntBASIC2.56□□□□□ -2
CTNND1O60716 PART1_1.1-201ENST00000611761 217 ntBASIC2.56□□□□□ -2
CTNND1O60716 AL590240.4-201ENST00000616908 390 ntBASIC2.56□□□□□ -2
CTNND1O60716 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
CTNND1O60716 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.55□□□□□ -2
CTNND1O60716 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
CTNND1O60716 Y_RNA.152-201ENST00000363578 100 ntBASIC2.55□□□□□ -2
CTNND1O60716 Y_RNA.230-201ENST00000364348 109 ntBASIC2.55□□□□□ -2
CTNND1O60716 SNORA80E-201ENST00000384744 137 ntBASIC2.55□□□□□ -2
CTNND1O60716 AC113618.1-201ENST00000416747 285 ntBASIC2.55□□□□□ -2
CTNND1O60716 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.55□□□□□ -2
CTNND1O60716 AC073910.1-201ENST00000445047 438 ntBASIC2.55□□□□□ -2
CTNND1O60716 RPL23AP42-201ENST00000471152 471 ntBASIC2.55□□□□□ -2
CTNND1O60716 RNU7-193P-201ENST00000516723 65 ntBASIC2.55□□□□□ -2
CTNND1O60716 AC025647.1-201ENST00000517879 253 ntBASIC2.55□□□□□ -2
CTNND1O60716 AC005176.2-201ENST00000596933 147 ntBASIC2.55□□□□□ -2
CTNND1O60716 AC004467.1-201ENST00000615678 330 ntBASIC2.55□□□□□ -2
CTNND1O60716 AL159152.1-201ENST00000635019 2587 ntBASIC2.55□□□□□ -2
CTNND1O60716 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.55□□□□□ -2
CTNND1O60716 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
CTNND1O60716 RNU6-23P-201ENST00000363283 107 ntBASIC2.54□□□□□ -2
CTNND1O60716 Y_RNA.162-201ENST00000363683 102 ntBASIC2.54□□□□□ -2
CTNND1O60716 Y_RNA.183-201ENST00000363882 113 ntBASIC2.54□□□□□ -2
CTNND1O60716 Y_RNA.462-201ENST00000384268 102 ntBASIC2.54□□□□□ -2
CTNND1O60716 RNU6-738P-201ENST00000384531 106 ntBASIC2.54□□□□□ -2
CTNND1O60716 SNORA48.3-201ENST00000391081 134 ntBASIC2.54□□□□□ -2
CTNND1O60716 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.54□□□□□ -2
CTNND1O60716 RNU6-130P-201ENST00000411112 103 ntBASIC2.54□□□□□ -2
CTNND1O60716 AC008134.1-201ENST00000420943 193 ntBASIC2.54□□□□□ -2
CTNND1O60716 BX510359.4-201ENST00000423750 193 ntBASIC2.54□□□□□ -2
CTNND1O60716 AL445646.1-201ENST00000431784 216 ntBASIC2.54□□□□□ -2
CTNND1O60716 SNORA31.25-201ENST00000517242 134 ntBASIC2.54□□□□□ -2
CTNND1O60716 AP002001.1-203ENST00000534002 267 ntBASIC2.54□□□□□ -2
CTNND1O60716 AC009127.3-201ENST00000570531 403 ntBASIC2.54□□□□□ -2
CTNND1O60716 MIR3169-201ENST00000578032 83 ntBASIC2.54□□□□□ -2
CTNND1O60716 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.54□□□□□ -2
CTNND1O60716 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.54□□□□□ -2
CTNND1O60716 AC005336.3-201ENST00000623833 2679 ntBASIC2.53□□□□□ -2
CTNND1O60716 AL356292.1-201ENST00000283110 373 ntBASIC2.53□□□□□ -2
CTNND1O60716 Y_RNA.143-201ENST00000363520 106 ntBASIC2.53□□□□□ -2
CTNND1O60716 Y_RNA.145-201ENST00000363527 102 ntBASIC2.53□□□□□ -2
CTNND1O60716 SNORA72.2-201ENST00000365028 127 ntBASIC2.53□□□□□ -2
CTNND1O60716 RNU11-3P-201ENST00000391111 133 ntBASIC2.53□□□□□ -2
CTNND1O60716 RNU5A-5P-201ENST00000411054 116 ntBASIC2.53□□□□□ -2
CTNND1O60716 AC060773.1-201ENST00000421698 310 ntBASIC2.53□□□□□ -2
CTNND1O60716 HMGB3P3-201ENST00000510526 400 ntBASIC2.53□□□□□ -2
CTNND1O60716 RNU6-897P-201ENST00000517135 105 ntBASIC2.53□□□□□ -2
CTNND1O60716 Y_RNA.720-201ENST00000517166 92 ntBASIC2.53□□□□□ -2
CTNND1O60716 AC131281.1-201ENST00000522984 164 ntBASIC2.53□□□□□ -2
CTNND1O60716 MIR3684-201ENST00000579779 74 ntBASIC2.53□□□□□ -2
CTNND1O60716 RAC1P9-201ENST00000604990 392 ntBASIC2.53□□□□□ -2
CTNND1O60716 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2.01
CTNND1O60716 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
CTNND1O60716 Y_RNA.153-201ENST00000363615 91 ntBASIC2.52□□□□□ -2.01
CTNND1O60716 RNU6-1240P-201ENST00000365155 104 ntBASIC2.52□□□□□ -2.01
CTNND1O60716 RNU1-51P-201ENST00000365345 176 ntBASIC2.52□□□□□ -2.01
CTNND1O60716 SNORD63-201ENST00000384262 68 ntBASIC2.52□□□□□ -2.01
CTNND1O60716 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC2.52□□□□□ -2.01
CTNND1O60716 AC005002.2-201ENST00000438228 269 ntBASIC2.52□□□□□ -2.01
CTNND1O60716 AL353689.1-201ENST00000438895 199 ntBASIC2.52□□□□□ -2.01
CTNND1O60716 RNU6-397P-201ENST00000516226 104 ntBASIC2.52□□□□□ -2.01
CTNND1O60716 AC055872.1-201ENST00000570978 278 ntBASIC2.52□□□□□ -2.01
CTNND1O60716 AC008737.2-201ENST00000599446 118 ntBASIC2.52□□□□□ -2.01
CTNND1O60716 AL360085.1-201ENST00000604713 532 ntBASIC2.52□□□□□ -2.01
CTNND1O60716 AC006001.4-201ENST00000622243 395 ntBASIC2.52□□□□□ -2.01
CTNND1O60716 ZNF355P-201ENST00000427301 3216 ntBASIC2.52□□□□□ -2.01
CTNND1O60716 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
CTNND1O60716 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
CTNND1O60716 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.51□□□□□ -2.01
CTNND1O60716 RNU6-1266P-201ENST00000362794 105 ntBASIC2.51□□□□□ -2.01
CTNND1O60716 RNU6-454P-201ENST00000364292 107 ntBASIC2.51□□□□□ -2.01
CTNND1O60716 U8.13-201ENST00000390842 128 ntBASIC2.51□□□□□ -2.01
CTNND1O60716 RNA5SP465-201ENST00000391195 109 ntBASIC2.51□□□□□ -2.01
CTNND1O60716 MIR1283-2-201ENST00000408621 87 ntBASIC2.51□□□□□ -2.01
CTNND1O60716 AL390729.2-201ENST00000416137 156 ntBASIC2.51□□□□□ -2.01
CTNND1O60716 AL603825.1-201ENST00000438481 80 ntBASIC2.51□□□□□ -2.01
CTNND1O60716 HMGN2P23-201ENST00000456759 269 ntBASIC2.51□□□□□ -2.01
CTNND1O60716 AC011406.1-201ENST00000512440 370 ntBASIC2.51□□□□□ -2.01
CTNND1O60716 RNU6-327P-201ENST00000516270 127 ntBASIC2.51□□□□□ -2.01
CTNND1O60716 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.51□□□□□ -2.01
CTNND1O60716 MIR4529-201ENST00000578110 78 ntBASIC2.51□□□□□ -2.01
CTNND1O60716 MIR4423-201ENST00000580922 80 ntBASIC2.51□□□□□ -2.01
CTNND1O60716 U2.15-201ENST00000611544 191 ntBASIC2.51□□□□□ -2.01
CTNND1O60716 U2.16-201ENST00000613119 191 ntBASIC2.51□□□□□ -2.01
CTNND1O60716 U2.12-201ENST00000613778 191 ntBASIC2.51□□□□□ -2.01
CTNND1O60716 U2.20-201ENST00000613956 192 ntBASIC2.51□□□□□ -2.01
CTNND1O60716 U2.9-201ENST00000615427 191 ntBASIC2.51□□□□□ -2.01
CTNND1O60716 U2.11-201ENST00000616345 191 ntBASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms