Protein–RNA interactions for Protein: O60637

TSPAN3, Tetraspanin-3, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3O60637 RNA5SP458-201ENST00000516188 119 ntBASIC2.13□□□□□ -2.07
TSPAN3O60637 RN7SKP295-201ENST00000517264 153 ntBASIC2.13□□□□□ -2.07
TSPAN3O60637 AC027419.1-201ENST00000522976 328 ntBASIC2.13□□□□□ -2.07
TSPAN3O60637 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.13□□□□□ -2.07
TSPAN3O60637 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC2.13□□□□□ -2.07
TSPAN3O60637 MIR5188-201ENST00000583467 113 ntBASIC2.13□□□□□ -2.07
TSPAN3O60637 SNORD58B-201ENST00000607313 66 ntBASIC2.13□□□□□ -2.07
TSPAN3O60637 CENPF-206ENST00000614578 528 ntTSL 5 BASIC2.13□□□□□ -2.07
TSPAN3O60637 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC2.13□□□□□ -2.07
TSPAN3O60637 RNU6-1266P-201ENST00000362794 105 ntBASIC2.12□□□□□ -2.07
TSPAN3O60637 RNU1-96P-201ENST00000364163 162 ntBASIC2.12□□□□□ -2.07
TSPAN3O60637 RNU6-1240P-201ENST00000365155 104 ntBASIC2.12□□□□□ -2.07
TSPAN3O60637 RNU6-417P-201ENST00000384712 107 ntBASIC2.12□□□□□ -2.07
TSPAN3O60637 SNORD78.2-201ENST00000391076 69 ntBASIC2.12□□□□□ -2.07
TSPAN3O60637 RNU6ATAC15P-201ENST00000408279 121 ntBASIC2.12□□□□□ -2.07
TSPAN3O60637 AL158823.1-201ENST00000418441 478 ntBASIC2.12□□□□□ -2.07
TSPAN3O60637 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.12□□□□□ -2.07
TSPAN3O60637 RAB28P5-201ENST00000427490 651 ntBASIC2.12□□□□□ -2.07
TSPAN3O60637 TRAPPC2P8-201ENST00000440676 396 ntBASIC2.12□□□□□ -2.07
TSPAN3O60637 HMGN2P23-201ENST00000456759 269 ntBASIC2.12□□□□□ -2.07
TSPAN3O60637 Y_RNA.676-201ENST00000516393 96 ntBASIC2.12□□□□□ -2.07
TSPAN3O60637 RNU6-911P-201ENST00000516523 104 ntBASIC2.12□□□□□ -2.07
TSPAN3O60637 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC2.12□□□□□ -2.07
TSPAN3O60637 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC2.12□□□□□ -2.07
TSPAN3O60637 U1.36-201ENST00000620684 176 ntBASIC2.12□□□□□ -2.07
TSPAN3O60637 U6.92-201ENST00000636464 89 ntBASIC2.12□□□□□ -2.07
TSPAN3O60637 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
TSPAN3O60637 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
TSPAN3O60637 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
TSPAN3O60637 ZNF355P-201ENST00000427301 3216 ntBASIC2.12□□□□□ -2.07
TSPAN3O60637 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.11□□□□□ -2.07
TSPAN3O60637 ANKRD30BP1-201ENST00000451052 2186 ntBASIC2.11□□□□□ -2.07
TSPAN3O60637 AL356292.1-201ENST00000283110 373 ntBASIC2.11□□□□□ -2.07
TSPAN3O60637 Y_RNA.27-201ENST00000362540 103 ntBASIC2.11□□□□□ -2.07
TSPAN3O60637 SNORA48.1-201ENST00000390879 135 ntBASIC2.11□□□□□ -2.07
TSPAN3O60637 RNU2-2P-201ENST00000410396 191 ntBASIC2.11□□□□□ -2.07
TSPAN3O60637 RNU2-40P-201ENST00000410833 196 ntBASIC2.11□□□□□ -2.07
TSPAN3O60637 MCFD2P1-201ENST00000417812 300 ntBASIC2.11□□□□□ -2.07
TSPAN3O60637 MTND1P14-201ENST00000427400 950 ntBASIC2.11□□□□□ -2.07
TSPAN3O60637 AC099677.2-201ENST00000436385 175 ntBASIC2.11□□□□□ -2.07
TSPAN3O60637 FCF1P4-201ENST00000448326 183 ntBASIC2.11□□□□□ -2.07
TSPAN3O60637 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC2.11□□□□□ -2.07
TSPAN3O60637 Y_RNA.631-201ENST00000459607 101 ntBASIC2.11□□□□□ -2.07
TSPAN3O60637 AC010469.2-201ENST00000496412 480 ntBASIC2.11□□□□□ -2.07
TSPAN3O60637 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC2.11□□□□□ -2.07
TSPAN3O60637 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.11□□□□□ -2.07
TSPAN3O60637 MIR4659A-201ENST00000580269 81 ntBASIC2.11□□□□□ -2.07
TSPAN3O60637 MIR5002-201ENST00000584713 97 ntBASIC2.11□□□□□ -2.07
TSPAN3O60637 SNRPGP19-201ENST00000603826 189 ntBASIC2.11□□□□□ -2.07
TSPAN3O60637 U2.15-201ENST00000611544 191 ntBASIC2.11□□□□□ -2.07
TSPAN3O60637 U2.16-201ENST00000613119 191 ntBASIC2.11□□□□□ -2.07
TSPAN3O60637 U2.12-201ENST00000613778 191 ntBASIC2.11□□□□□ -2.07
TSPAN3O60637 U2.20-201ENST00000613956 192 ntBASIC2.11□□□□□ -2.07
TSPAN3O60637 AL773524.1-201ENST00000614065 229 ntBASIC2.11□□□□□ -2.07
TSPAN3O60637 U2.9-201ENST00000615427 191 ntBASIC2.11□□□□□ -2.07
TSPAN3O60637 U2.11-201ENST00000616345 191 ntBASIC2.11□□□□□ -2.07
TSPAN3O60637 U2.2-201ENST00000616535 191 ntBASIC2.11□□□□□ -2.07
TSPAN3O60637 U2.3-201ENST00000617785 191 ntBASIC2.11□□□□□ -2.07
TSPAN3O60637 AL138825.1-201ENST00000618587 192 ntBASIC2.11□□□□□ -2.07
TSPAN3O60637 U2.19-201ENST00000618602 191 ntBASIC2.11□□□□□ -2.07
TSPAN3O60637 RNU2-1-201ENST00000618664 191 ntBASIC2.11□□□□□ -2.07
TSPAN3O60637 U2.6-201ENST00000619225 191 ntBASIC2.11□□□□□ -2.07
TSPAN3O60637 U2.5-201ENST00000619465 191 ntBASIC2.11□□□□□ -2.07
TSPAN3O60637 U2.10-201ENST00000620268 191 ntBASIC2.11□□□□□ -2.07
TSPAN3O60637 AC091812.1-201ENST00000432235 1948 ntBASIC2.11□□□□□ -2.07
TSPAN3O60637 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.1□□□□□ -2.07
TSPAN3O60637 snoU2-30.2-201ENST00000362805 70 ntBASIC2.1□□□□□ -2.07
TSPAN3O60637 RNU6-961P-201ENST00000363893 105 ntBASIC2.1□□□□□ -2.07
TSPAN3O60637 U8.13-201ENST00000390842 128 ntBASIC2.1□□□□□ -2.07
TSPAN3O60637 RNA5SP475-201ENST00000410568 110 ntBASIC2.1□□□□□ -2.07
TSPAN3O60637 PMCHL1-202ENST00000423102 261 ntBASIC2.1□□□□□ -2.07
TSPAN3O60637 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC2.1□□□□□ -2.07
TSPAN3O60637 MTND4P19-201ENST00000446659 478 ntBASIC2.1□□□□□ -2.07
TSPAN3O60637 RNU6-1146P-201ENST00000516282 102 ntBASIC2.1□□□□□ -2.07
TSPAN3O60637 AP002001.1-203ENST00000534002 267 ntBASIC2.1□□□□□ -2.07
TSPAN3O60637 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC2.1□□□□□ -2.07
TSPAN3O60637 RPS29P30-201ENST00000600975 111 ntBASIC2.1□□□□□ -2.07
TSPAN3O60637 AL096840.1-201ENST00000603287 93 ntBASIC2.1□□□□□ -2.07
TSPAN3O60637 MIR338-201ENST00000636369 67 ntBASIC2.1□□□□□ -2.07
TSPAN3O60637 MIR3674-201ENST00000636576 68 ntBASIC2.1□□□□□ -2.07
TSPAN3O60637 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.1□□□□□ -2.07
TSPAN3O60637 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
TSPAN3O60637 Y_RNA.11-201ENST00000362375 109 ntBASIC2.09□□□□□ -2.07
TSPAN3O60637 SNORA51.11-201ENST00000384442 131 ntBASIC2.09□□□□□ -2.07
TSPAN3O60637 AC079804.2-201ENST00000490376 200 ntBASIC2.09□□□□□ -2.07
TSPAN3O60637 TRAPPC2P7-201ENST00000509650 231 ntBASIC2.09□□□□□ -2.07
TSPAN3O60637 RNU6-1012P-201ENST00000516606 109 ntBASIC2.09□□□□□ -2.07
TSPAN3O60637 RNU6-1153P-201ENST00000516760 105 ntBASIC2.09□□□□□ -2.07
TSPAN3O60637 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC2.09□□□□□ -2.07
TSPAN3O60637 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.09□□□□□ -2.07
TSPAN3O60637 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.09□□□□□ -2.07
TSPAN3O60637 AC134503.1-201ENST00000633048 54 ntBASIC2.09□□□□□ -2.07
TSPAN3O60637 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.09□□□□□ -2.08
TSPAN3O60637 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.09□□□□□ -2.08
TSPAN3O60637 Y_RNA.128-201ENST00000363391 112 ntBASIC2.08□□□□□ -2.08
TSPAN3O60637 SNORA33-201ENST00000363664 130 ntBASIC2.08□□□□□ -2.08
TSPAN3O60637 AL117342.1-201ENST00000404861 406 ntBASIC2.08□□□□□ -2.08
TSPAN3O60637 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.08□□□□□ -2.08
TSPAN3O60637 MIR548P-201ENST00000408336 84 ntBASIC2.08□□□□□ -2.08
TSPAN3O60637 AC244636.1-201ENST00000421152 228 ntBASIC2.08□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms