Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 AC003989.2-201ENST00000440224 169 ntBASIC1.65□□□□□ -2.15
SNX3O60493 AC007677.1-201ENST00000445757 515 ntBASIC1.65□□□□□ -2.15
SNX3O60493 RNU6-625P-201ENST00000459412 107 ntBASIC1.65□□□□□ -2.15
SNX3O60493 RNA5SP437-201ENST00000517249 129 ntBASIC1.65□□□□□ -2.15
SNX3O60493 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
SNX3O60493 AP002001.1-203ENST00000534002 267 ntBASIC1.65□□□□□ -2.15
SNX3O60493 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC1.65□□□□□ -2.15
SNX3O60493 AL590808.1-201ENST00000618696 141 ntBASIC1.65□□□□□ -2.15
SNX3O60493 U2.1-201ENST00000618978 145 ntBASIC1.65□□□□□ -2.15
SNX3O60493 AC104985.2-201ENST00000620598 500 ntBASIC1.65□□□□□ -2.15
SNX3O60493 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.65□□□□□ -2.15
SNX3O60493 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.65□□□□□ -2.15
SNX3O60493 MIR449A-201ENST00000362113 91 ntBASIC1.64□□□□□ -2.15
SNX3O60493 RNU6-1266P-201ENST00000362794 105 ntBASIC1.64□□□□□ -2.15
SNX3O60493 Y_RNA.428-201ENST00000384078 102 ntBASIC1.64□□□□□ -2.15
SNX3O60493 RNU6-439P-201ENST00000384188 106 ntBASIC1.64□□□□□ -2.15
SNX3O60493 Y_RNA.496-201ENST00000384444 101 ntBASIC1.64□□□□□ -2.15
SNX3O60493 MIR520A-201ENST00000384862 85 ntBASIC1.64□□□□□ -2.15
SNX3O60493 RNA5SP425-201ENST00000410336 112 ntBASIC1.64□□□□□ -2.15
SNX3O60493 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.64□□□□□ -2.15
SNX3O60493 SNORD65B-201ENST00000459126 73 ntBASIC1.64□□□□□ -2.15
SNX3O60493 AC027419.1-201ENST00000522976 328 ntBASIC1.64□□□□□ -2.15
SNX3O60493 GNAI2P1-201ENST00000541815 315 ntBASIC1.64□□□□□ -2.15
SNX3O60493 AL442163.3-201ENST00000554110 156 ntBASIC1.64□□□□□ -2.15
SNX3O60493 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.64□□□□□ -2.15
SNX3O60493 ZNF72P-201ENST00000425869 1908 ntBASIC1.64□□□□□ -2.15
SNX3O60493 Y_RNA.5-201ENST00000362334 102 ntBASIC1.63□□□□□ -2.15
SNX3O60493 SNORA63D-201ENST00000364359 132 ntBASIC1.63□□□□□ -2.15
SNX3O60493 RNU6-926P-201ENST00000384075 107 ntBASIC1.63□□□□□ -2.15
SNX3O60493 RNU6-708P-201ENST00000384217 107 ntBASIC1.63□□□□□ -2.15
SNX3O60493 RN7SKP223-201ENST00000410582 62 ntBASIC1.63□□□□□ -2.15
SNX3O60493 RNU2-7P-201ENST00000410794 178 ntBASIC1.63□□□□□ -2.15
SNX3O60493 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.63□□□□□ -2.15
SNX3O60493 Z98742.3-201ENST00000418637 326 ntBASIC1.63□□□□□ -2.15
SNX3O60493 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.63□□□□□ -2.15
SNX3O60493 AL445685.2-201ENST00000422551 342 ntBASIC1.63□□□□□ -2.15
SNX3O60493 RAB28P5-201ENST00000427490 651 ntBASIC1.63□□□□□ -2.15
SNX3O60493 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
SNX3O60493 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.63□□□□□ -2.15
SNX3O60493 AC027575.1-201ENST00000481064 460 ntBASIC1.63□□□□□ -2.15
SNX3O60493 Y_RNA.661-201ENST00000516003 99 ntBASIC1.63□□□□□ -2.15
SNX3O60493 SNORD116.3-201ENST00000517176 78 ntBASIC1.63□□□□□ -2.15
SNX3O60493 AC022432.1-201ENST00000595739 310 ntBASIC1.63□□□□□ -2.15
SNX3O60493 AL133255.1-201ENST00000606374 441 ntBASIC1.63□□□□□ -2.15
SNX3O60493 AC116312.1-201ENST00000606841 314 ntBASIC1.63□□□□□ -2.15
SNX3O60493 MIR6852-201ENST00000621699 66 ntBASIC1.63□□□□□ -2.15
SNX3O60493 AC091925.1-201ENST00000623204 462 ntBASIC1.63□□□□□ -2.15
SNX3O60493 U6.108-201ENST00000637764 58 ntBASIC1.63□□□□□ -2.15
SNX3O60493 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
SNX3O60493 AL356292.1-201ENST00000283110 373 ntBASIC1.62□□□□□ -2.15
SNX3O60493 SNORA72.2-201ENST00000365028 127 ntBASIC1.62□□□□□ -2.15
SNX3O60493 Y_RNA.419-201ENST00000384041 102 ntBASIC1.62□□□□□ -2.15
SNX3O60493 RNY3P4-201ENST00000384428 101 ntBASIC1.62□□□□□ -2.15
SNX3O60493 Y_RNA.509-201ENST00000384506 99 ntBASIC1.62□□□□□ -2.15
SNX3O60493 MIR515-2-201ENST00000384883 83 ntBASIC1.62□□□□□ -2.15
SNX3O60493 MIR515-1-201ENST00000384884 83 ntBASIC1.62□□□□□ -2.15
SNX3O60493 RNA5SP323-201ENST00000391094 133 ntBASIC1.62□□□□□ -2.15
SNX3O60493 SNORA3.2-201ENST00000408221 125 ntBASIC1.62□□□□□ -2.15
SNX3O60493 AC022028.1-201ENST00000412054 408 ntBASIC1.62□□□□□ -2.15
SNX3O60493 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.62□□□□□ -2.15
SNX3O60493 DPH3P2-201ENST00000422618 250 ntBASIC1.62□□□□□ -2.15
SNX3O60493 HSPE1P9-201ENST00000440046 311 ntBASIC1.62□□□□□ -2.15
SNX3O60493 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.62□□□□□ -2.15
SNX3O60493 TRBV12-1-201ENST00000479785 344 ntBASIC1.62□□□□□ -2.15
SNX3O60493 AL163195.1-201ENST00000496941 348 ntBASIC1.62□□□□□ -2.15
SNX3O60493 RNU6-408P-201ENST00000515910 100 ntBASIC1.62□□□□□ -2.15
SNX3O60493 C8orf59P2-201ENST00000603441 271 ntBASIC1.62□□□□□ -2.15
SNX3O60493 AC064859.1-201ENST00000624741 174 ntBASIC1.62□□□□□ -2.15
SNX3O60493 MIR410-201ENST00000362222 80 ntBASIC1.61□□□□□ -2.15
SNX3O60493 RNU6-961P-201ENST00000363893 105 ntBASIC1.61□□□□□ -2.15
SNX3O60493 RNU6-454P-201ENST00000364292 107 ntBASIC1.61□□□□□ -2.15
SNX3O60493 RNU6-997P-201ENST00000384725 107 ntBASIC1.61□□□□□ -2.15
SNX3O60493 MIR628-201ENST00000385229 95 ntBASIC1.61□□□□□ -2.15
SNX3O60493 MIR320A-201ENST00000385302 82 ntBASIC1.61□□□□□ -2.15
SNX3O60493 RNU6-1186P-201ENST00000410429 97 ntBASIC1.61□□□□□ -2.15
SNX3O60493 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
SNX3O60493 AC005002.2-201ENST00000438228 269 ntBASIC1.61□□□□□ -2.15
SNX3O60493 AC073910.1-201ENST00000445047 438 ntBASIC1.61□□□□□ -2.15
SNX3O60493 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.61□□□□□ -2.15
SNX3O60493 AL137100.2-201ENST00000555786 315 ntBASIC1.61□□□□□ -2.15
SNX3O60493 AC006600.1-201ENST00000572529 153 ntBASIC1.61□□□□□ -2.15
SNX3O60493 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.61□□□□□ -2.15
SNX3O60493 AL359075.3-201ENST00000613288 217 ntBASIC1.61□□□□□ -2.15
SNX3O60493 U6.73-201ENST00000619194 103 ntBASIC1.61□□□□□ -2.15
SNX3O60493 MIR4272-201ENST00000635924 64 ntBASIC1.61□□□□□ -2.15
SNX3O60493 MIR3674-201ENST00000636576 68 ntBASIC1.61□□□□□ -2.15
SNX3O60493 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
SNX3O60493 Y_RNA.111-201ENST00000363248 100 ntBASIC1.6□□□□□ -2.15
SNX3O60493 Y_RNA.197-201ENST00000364004 102 ntBASIC1.6□□□□□ -2.15
SNX3O60493 Y_RNA.252-201ENST00000364556 101 ntBASIC1.6□□□□□ -2.15
SNX3O60493 SNORA20B-201ENST00000384220 132 ntBASIC1.6□□□□□ -2.15
SNX3O60493 AL355796.1-201ENST00000406706 323 ntBASIC1.6□□□□□ -2.15
SNX3O60493 RNA5SP475-201ENST00000410568 110 ntBASIC1.6□□□□□ -2.15
SNX3O60493 Y_RNA.604-201ENST00000410574 102 ntBASIC1.6□□□□□ -2.15
SNX3O60493 RNA5SP508-201ENST00000411327 119 ntBASIC1.6□□□□□ -2.15
SNX3O60493 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.6□□□□□ -2.15
SNX3O60493 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.6□□□□□ -2.15
SNX3O60493 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC1.6□□□□□ -2.15
SNX3O60493 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.6□□□□□ -2.15
SNX3O60493 AC069257.2-201ENST00000441819 155 ntBASIC1.6□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 316.4 ms