Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 RNU6-57P-201ENST00000411348 103 ntBASIC2.05□□□□□ -2.08
ZIC3O60481 RPL21P38-201ENST00000418090 167 ntBASIC2.05□□□□□ -2.08
ZIC3O60481 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC2.05□□□□□ -2.08
ZIC3O60481 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.05□□□□□ -2.08
ZIC3O60481 AC098869.1-201ENST00000481627 292 ntBASIC2.05□□□□□ -2.08
ZIC3O60481 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.05□□□□□ -2.08
ZIC3O60481 RNA5SP137-201ENST00000516833 135 ntBASIC2.05□□□□□ -2.08
ZIC3O60481 RNU2-12P-201ENST00000517216 168 ntBASIC2.05□□□□□ -2.08
ZIC3O60481 MIR3126-201ENST00000577443 74 ntBASIC2.05□□□□□ -2.08
ZIC3O60481 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC2.05□□□□□ -2.08
ZIC3O60481 MIR203B-201ENST00000636080 86 ntBASIC2.05□□□□□ -2.08
ZIC3O60481 ZNF658B-202ENST00000615961 3375 ntBASIC2.05□□□□□ -2.08
ZIC3O60481 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
ZIC3O60481 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
ZIC3O60481 snoU2_19.2-201ENST00000363024 80 ntBASIC2.04□□□□□ -2.08
ZIC3O60481 Y_RNA.446-201ENST00000384178 104 ntBASIC2.04□□□□□ -2.08
ZIC3O60481 RNU1-52P-201ENST00000384190 164 ntBASIC2.04□□□□□ -2.08
ZIC3O60481 RNU2-54P-201ENST00000410299 190 ntBASIC2.04□□□□□ -2.08
ZIC3O60481 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC2.04□□□□□ -2.08
ZIC3O60481 AL390729.2-201ENST00000416137 156 ntBASIC2.04□□□□□ -2.08
ZIC3O60481 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.04□□□□□ -2.08
ZIC3O60481 AL356320.1-201ENST00000429616 163 ntBASIC2.04□□□□□ -2.08
ZIC3O60481 CR769767.1-201ENST00000436337 346 ntBASIC2.04□□□□□ -2.08
ZIC3O60481 AC011753.1-201ENST00000451001 220 ntBASIC2.04□□□□□ -2.08
ZIC3O60481 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.04□□□□□ -2.08
ZIC3O60481 AL139109.1-201ENST00000455491 297 ntBASIC2.04□□□□□ -2.08
ZIC3O60481 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.04□□□□□ -2.08
ZIC3O60481 RNU6-856P-201ENST00000516959 98 ntBASIC2.04□□□□□ -2.08
ZIC3O60481 RNA5SP402-201ENST00000517148 110 ntBASIC2.04□□□□□ -2.08
ZIC3O60481 AC025647.1-201ENST00000517879 253 ntBASIC2.04□□□□□ -2.08
ZIC3O60481 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC2.04□□□□□ -2.08
ZIC3O60481 AP003733.2-201ENST00000529409 171 ntBASIC2.04□□□□□ -2.08
ZIC3O60481 MDM2-232ENST00000544561 213 ntTSL 5 BASIC2.04□□□□□ -2.08
ZIC3O60481 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.04□□□□□ -2.08
ZIC3O60481 SNORD14A-201ENST00000606526 91 ntBASIC2.04□□□□□ -2.08
ZIC3O60481 AC011373.1-201ENST00000607270 237 ntBASIC2.04□□□□□ -2.08
ZIC3O60481 ZNF271P-202ENST00000465539 1970 ntBASIC2.03□□□□□ -2.08
ZIC3O60481 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
ZIC3O60481 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
ZIC3O60481 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
ZIC3O60481 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
ZIC3O60481 SNORD113-8-201ENST00000363497 74 ntBASIC2.03□□□□□ -2.08
ZIC3O60481 SNORA72.2-201ENST00000365028 127 ntBASIC2.03□□□□□ -2.08
ZIC3O60481 MIR221-201ENST00000385135 110 ntBASIC2.03□□□□□ -2.08
ZIC3O60481 AL135786.1-201ENST00000415892 214 ntBASIC2.03□□□□□ -2.08
ZIC3O60481 AC016909.1-201ENST00000415916 166 ntBASIC2.03□□□□□ -2.08
ZIC3O60481 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.03□□□□□ -2.08
ZIC3O60481 RNU1-131P-201ENST00000458943 161 ntBASIC2.03□□□□□ -2.08
ZIC3O60481 TRBV12-1-201ENST00000479785 344 ntBASIC2.03□□□□□ -2.08
ZIC3O60481 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.03□□□□□ -2.08
ZIC3O60481 RNU6-496P-201ENST00000516145 99 ntBASIC2.03□□□□□ -2.08
ZIC3O60481 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC2.03□□□□□ -2.08
ZIC3O60481 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.03□□□□□ -2.08
ZIC3O60481 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.03□□□□□ -2.08
ZIC3O60481 MIR8062-201ENST00000621515 85 ntBASIC2.03□□□□□ -2.08
ZIC3O60481 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.03□□□□□ -2.08
ZIC3O60481 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC2.03□□□□□ -2.09
ZIC3O60481 SNORD81.1-201ENST00000363064 77 ntBASIC2.02□□□□□ -2.09
ZIC3O60481 Y_RNA.243-201ENST00000364481 109 ntBASIC2.02□□□□□ -2.09
ZIC3O60481 Y_RNA.286-201ENST00000364813 102 ntBASIC2.02□□□□□ -2.09
ZIC3O60481 RNU6-102P-201ENST00000384485 104 ntBASIC2.02□□□□□ -2.09
ZIC3O60481 RNU6-160P-201ENST00000384591 107 ntBASIC2.02□□□□□ -2.09
ZIC3O60481 MIR215-201ENST00000384858 110 ntBASIC2.02□□□□□ -2.09
ZIC3O60481 Y_RNA.581-201ENST00000391017 97 ntBASIC2.02□□□□□ -2.09
ZIC3O60481 RNU4-30P-201ENST00000410245 143 ntBASIC2.02□□□□□ -2.09
ZIC3O60481 RNA5SP425-201ENST00000410336 112 ntBASIC2.02□□□□□ -2.09
ZIC3O60481 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.02□□□□□ -2.09
ZIC3O60481 AC245102.2-201ENST00000448956 180 ntBASIC2.02□□□□□ -2.09
ZIC3O60481 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.02□□□□□ -2.09
ZIC3O60481 RNU1-41P-201ENST00000516161 162 ntBASIC2.02□□□□□ -2.09
ZIC3O60481 RNU1-48P-201ENST00000516400 162 ntBASIC2.02□□□□□ -2.09
ZIC3O60481 RNU7-110P-201ENST00000516891 62 ntBASIC2.02□□□□□ -2.09
ZIC3O60481 AL161670.1-201ENST00000554348 137 ntBASIC2.02□□□□□ -2.09
ZIC3O60481 MIR3945-201ENST00000581853 98 ntBASIC2.02□□□□□ -2.09
ZIC3O60481 AL031274.2-201ENST00000599419 203 ntBASIC2.02□□□□□ -2.09
ZIC3O60481 AC005828.6-201ENST00000606610 232 ntBASIC2.02□□□□□ -2.09
ZIC3O60481 SNORD113-5-201ENST00000607261 78 ntBASIC2.02□□□□□ -2.09
ZIC3O60481 AL590240.4-201ENST00000616908 390 ntBASIC2.02□□□□□ -2.09
ZIC3O60481 U6.115-201ENST00000636045 103 ntBASIC2.02□□□□□ -2.09
ZIC3O60481 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
ZIC3O60481 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
ZIC3O60481 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
ZIC3O60481 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
ZIC3O60481 Y_RNA.144-201ENST00000363521 113 ntBASIC2.01□□□□□ -2.09
ZIC3O60481 Y_RNA.361-201ENST00000365515 120 ntBASIC2.01□□□□□ -2.09
ZIC3O60481 Y_RNA.376-201ENST00000365638 108 ntBASIC2.01□□□□□ -2.09
ZIC3O60481 RNU6-713P-201ENST00000384761 107 ntBASIC2.01□□□□□ -2.09
ZIC3O60481 Y_RNA.602-201ENST00000410535 92 ntBASIC2.01□□□□□ -2.09
ZIC3O60481 RN7SKP223-201ENST00000410582 62 ntBASIC2.01□□□□□ -2.09
ZIC3O60481 RPL23AP36-201ENST00000413895 458 ntBASIC2.01□□□□□ -2.09
ZIC3O60481 AC060773.1-201ENST00000421698 310 ntBASIC2.01□□□□□ -2.09
ZIC3O60481 AC005042.3-201ENST00000453230 174 ntBASIC2.01□□□□□ -2.09
ZIC3O60481 HSPE1P25-201ENST00000455484 251 ntBASIC2.01□□□□□ -2.09
ZIC3O60481 HMGB3P17-201ENST00000504195 649 ntBASIC2.01□□□□□ -2.09
ZIC3O60481 SEPT14P8-201ENST00000508026 178 ntBASIC2.01□□□□□ -2.09
ZIC3O60481 RNA5SP82-201ENST00000516707 92 ntBASIC2.01□□□□□ -2.09
ZIC3O60481 MIR3684-201ENST00000579779 74 ntBASIC2.01□□□□□ -2.09
ZIC3O60481 AL137847.3-201ENST00000611521 109 ntBASIC2.01□□□□□ -2.09
ZIC3O60481 AC009831.4-201ENST00000620744 325 ntBASIC2.01□□□□□ -2.09
ZIC3O60481 TTK-211ENST00000627129 240 ntTSL 5 BASIC2.01□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 265.2 ms