Protein–RNA interactions for Protein: O43395

PRPF3, U4/U6 small nuclear ribonucleoprotein Prp3, humanhuman

Known RBP Predictions only

Length 683 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3O43395 Y_RNA.439-201ENST00000384119 94 ntBASIC2.56□□□□□ -2
PRPF3O43395 RNU11-3P-201ENST00000391111 133 ntBASIC2.56□□□□□ -2
PRPF3O43395 RPL26P26-201ENST00000480251 434 ntBASIC2.56□□□□□ -2
PRPF3O43395 RNU6-397P-201ENST00000516226 104 ntBASIC2.56□□□□□ -2
PRPF3O43395 RNA5SP200-201ENST00000516360 103 ntBASIC2.56□□□□□ -2
PRPF3O43395 AC025647.1-201ENST00000517879 253 ntBASIC2.56□□□□□ -2
PRPF3O43395 AC131281.1-201ENST00000522984 164 ntBASIC2.56□□□□□ -2
PRPF3O43395 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC2.56□□□□□ -2
PRPF3O43395 RAC1P9-201ENST00000604990 392 ntBASIC2.56□□□□□ -2
PRPF3O43395 AL021879.1-201ENST00000611756 288 ntBASIC2.56□□□□□ -2
PRPF3O43395 PART1_1.1-201ENST00000611761 217 ntBASIC2.56□□□□□ -2
PRPF3O43395 AC022202.1-201ENST00000613515 211 ntBASIC2.56□□□□□ -2
PRPF3O43395 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
PRPF3O43395 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
PRPF3O43395 SNORD115-3-201ENST00000363100 82 ntBASIC2.55□□□□□ -2
PRPF3O43395 RNU6-961P-201ENST00000363893 105 ntBASIC2.55□□□□□ -2
PRPF3O43395 AL079342.1-201ENST00000401460 267 ntBASIC2.55□□□□□ -2
PRPF3O43395 MIR1253-201ENST00000408273 105 ntBASIC2.55□□□□□ -2
PRPF3O43395 RNU5A-5P-201ENST00000411054 116 ntBASIC2.55□□□□□ -2
PRPF3O43395 RNU6-130P-201ENST00000411112 103 ntBASIC2.55□□□□□ -2
PRPF3O43395 DPH3P2-201ENST00000422618 250 ntBASIC2.55□□□□□ -2
PRPF3O43395 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.55□□□□□ -2
PRPF3O43395 RNU6-1045P-201ENST00000516321 107 ntBASIC2.55□□□□□ -2
PRPF3O43395 RNA5SP82-201ENST00000516707 92 ntBASIC2.55□□□□□ -2
PRPF3O43395 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC2.55□□□□□ -2
PRPF3O43395 MYL12BP1-201ENST00000569826 507 ntBASIC2.55□□□□□ -2
PRPF3O43395 CENPF-206ENST00000614578 528 ntTSL 5 BASIC2.55□□□□□ -2
PRPF3O43395 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.54□□□□□ -2
PRPF3O43395 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.54□□□□□ -2
PRPF3O43395 SNORA72.2-201ENST00000365028 127 ntBASIC2.54□□□□□ -2
PRPF3O43395 MIR504-201ENST00000385065 83 ntBASIC2.54□□□□□ -2
PRPF3O43395 SNORA48.3-201ENST00000391081 134 ntBASIC2.54□□□□□ -2
PRPF3O43395 RN7SKP192-201ENST00000411291 327 ntBASIC2.54□□□□□ -2
PRPF3O43395 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC2.54□□□□□ -2
PRPF3O43395 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.54□□□□□ -2
PRPF3O43395 AC016717.1-201ENST00000448918 286 ntBASIC2.54□□□□□ -2
PRPF3O43395 MTND5P22-201ENST00000458380 195 ntBASIC2.54□□□□□ -2
PRPF3O43395 AC104435.1-201ENST00000483483 166 ntBASIC2.54□□□□□ -2
PRPF3O43395 TRAPPC2P7-201ENST00000509650 231 ntBASIC2.54□□□□□ -2
PRPF3O43395 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.54□□□□□ -2
PRPF3O43395 AC006380.1-201ENST00000603598 186 ntBASIC2.54□□□□□ -2
PRPF3O43395 AL590240.4-201ENST00000616908 390 ntBASIC2.54□□□□□ -2
PRPF3O43395 AC012640.5-201ENST00000623897 319 ntBASIC2.54□□□□□ -2
PRPF3O43395 AC064859.1-201ENST00000624741 174 ntBASIC2.54□□□□□ -2
PRPF3O43395 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.54□□□□□ -2
PRPF3O43395 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.54□□□□□ -2
PRPF3O43395 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
PRPF3O43395 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
PRPF3O43395 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.53□□□□□ -2
PRPF3O43395 RNU6-271P-201ENST00000363858 105 ntBASIC2.53□□□□□ -2
PRPF3O43395 SNORA6-201ENST00000384033 151 ntBASIC2.53□□□□□ -2
PRPF3O43395 Y_RNA.459-201ENST00000384251 102 ntBASIC2.53□□□□□ -2
PRPF3O43395 MIR1283-2-201ENST00000408621 87 ntBASIC2.53□□□□□ -2
PRPF3O43395 BX510359.4-201ENST00000423750 193 ntBASIC2.53□□□□□ -2
PRPF3O43395 CST2P1-201ENST00000425770 87 ntBASIC2.53□□□□□ -2
PRPF3O43395 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.53□□□□□ -2
PRPF3O43395 AL356320.1-201ENST00000429616 163 ntBASIC2.53□□□□□ -2
PRPF3O43395 AC073910.1-201ENST00000445047 438 ntBASIC2.53□□□□□ -2
PRPF3O43395 AC055731.1-201ENST00000474387 401 ntBASIC2.53□□□□□ -2
PRPF3O43395 AC010655.3-201ENST00000478818 450 ntBASIC2.53□□□□□ -2
PRPF3O43395 AC008413.1-201ENST00000511864 177 ntBASIC2.53□□□□□ -2
PRPF3O43395 AC011406.1-201ENST00000512440 370 ntBASIC2.53□□□□□ -2
PRPF3O43395 RNU6-1143P-201ENST00000516125 104 ntBASIC2.53□□□□□ -2
PRPF3O43395 MDM2-232ENST00000544561 213 ntTSL 5 BASIC2.53□□□□□ -2
PRPF3O43395 AC005176.2-201ENST00000596933 147 ntBASIC2.53□□□□□ -2
PRPF3O43395 AL109918.3-201ENST00000603072 338 ntBASIC2.53□□□□□ -2
PRPF3O43395 AC136443.5-201ENST00000603741 370 ntBASIC2.53□□□□□ -2
PRPF3O43395 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.53□□□□□ -2.01
PRPF3O43395 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
PRPF3O43395 RNU6-626P-201ENST00000363354 107 ntBASIC2.52□□□□□ -2.01
PRPF3O43395 Y_RNA.210-201ENST00000364161 110 ntBASIC2.52□□□□□ -2.01
PRPF3O43395 SNORD114-6-201ENST00000364393 72 ntBASIC2.52□□□□□ -2.01
PRPF3O43395 Y_RNA.276-201ENST00000364732 109 ntBASIC2.52□□□□□ -2.01
PRPF3O43395 RNU6-20P-201ENST00000384106 107 ntBASIC2.52□□□□□ -2.01
PRPF3O43395 SNORD63-201ENST00000384262 68 ntBASIC2.52□□□□□ -2.01
PRPF3O43395 MIR144-201ENST00000384886 86 ntBASIC2.52□□□□□ -2.01
PRPF3O43395 Z98742.3-201ENST00000418637 326 ntBASIC2.52□□□□□ -2.01
PRPF3O43395 AC069257.2-201ENST00000441819 155 ntBASIC2.52□□□□□ -2.01
PRPF3O43395 MRPS35P2-201ENST00000508242 191 ntBASIC2.52□□□□□ -2.01
PRPF3O43395 AC010598.1-201ENST00000510378 103 ntBASIC2.52□□□□□ -2.01
PRPF3O43395 SCARNA16.3-201ENST00000516595 184 ntBASIC2.52□□□□□ -2.01
PRPF3O43395 SNORA40.15-201ENST00000516884 107 ntBASIC2.52□□□□□ -2.01
PRPF3O43395 RNU6-897P-201ENST00000517135 105 ntBASIC2.52□□□□□ -2.01
PRPF3O43395 MIR7843-201ENST00000622274 79 ntBASIC2.52□□□□□ -2.01
PRPF3O43395 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.52□□□□□ -2.01
PRPF3O43395 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
PRPF3O43395 snoU2-30.2-201ENST00000362805 70 ntBASIC2.51□□□□□ -2.01
PRPF3O43395 U8.2-201ENST00000363156 134 ntBASIC2.51□□□□□ -2.01
PRPF3O43395 Y_RNA.143-201ENST00000363520 106 ntBASIC2.51□□□□□ -2.01
PRPF3O43395 Y_RNA.183-201ENST00000363882 113 ntBASIC2.51□□□□□ -2.01
PRPF3O43395 SNORA3.2-201ENST00000408221 125 ntBASIC2.51□□□□□ -2.01
PRPF3O43395 snoU13.26-201ENST00000459452 105 ntBASIC2.51□□□□□ -2.01
PRPF3O43395 MTATP8P1-201ENST00000467115 207 ntBASIC2.51□□□□□ -2.01
PRPF3O43395 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.51□□□□□ -2.01
PRPF3O43395 HMGB3P3-201ENST00000510526 400 ntBASIC2.51□□□□□ -2.01
PRPF3O43395 AC024995.1-201ENST00000523014 93 ntBASIC2.51□□□□□ -2.01
PRPF3O43395 AL137100.2-201ENST00000555786 315 ntBASIC2.51□□□□□ -2.01
PRPF3O43395 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.51□□□□□ -2.01
PRPF3O43395 AC008749.1-201ENST00000597650 306 ntBASIC2.51□□□□□ -2.01
PRPF3O43395 U2.15-201ENST00000611544 191 ntBASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms