| PAX4 | O43316 | MAPK10-373 | ENST00000641983 | 6772 nt | BASIC | 3 | □□□□□ -1.93 | | |
| PAX4 | O43316 | FAM126B-202 | ENST00000418596 | 9333 nt | APPRIS P1 TSL 1 (best) BASIC | 3 | □□□□□ -1.93 | | |
| PAX4 | O43316 | MBNL3-204 | ENST00000370853 | 2661 nt | APPRIS P4 TSL 1 (best) BASIC | 3 | □□□□□ -1.93 | | |
| PAX4 | O43316 | DAZ4-206 | ENST00000449750 | 3271 nt | TSL 5 BASIC | 3 | □□□□□ -1.93 | | |
| PAX4 | O43316 | ABCD2-201 | ENST00000308666 | 6238 nt | APPRIS P1 TSL 1 (best) BASIC | 2.99 | □□□□□ -1.93 | | |
| PAX4 | O43316 | AC019117.3-201 | ENST00000637807 | 3523 nt | APPRIS P1 TSL 5 BASIC | 2.99 | □□□□□ -1.93 | | |
| PAX4 | O43316 | Y_RNA.37-201 | ENST00000362606 | 108 nt | BASIC | 2.99 | □□□□□ -1.93 | | |
| PAX4 | O43316 | RNU1-14P-201 | ENST00000362759 | 152 nt | BASIC | 2.99 | □□□□□ -1.93 | | |
| PAX4 | O43316 | RNU1-32P-201 | ENST00000363937 | 159 nt | BASIC | 2.99 | □□□□□ -1.93 | | |
| PAX4 | O43316 | SNORD74.4-201 | ENST00000364129 | 80 nt | BASIC | 2.99 | □□□□□ -1.93 | | |
| PAX4 | O43316 | Y_RNA.253-201 | ENST00000364562 | 112 nt | BASIC | 2.99 | □□□□□ -1.93 | | |
| PAX4 | O43316 | RNU6-411P-201 | ENST00000384451 | 107 nt | BASIC | 2.99 | □□□□□ -1.93 | | |
| PAX4 | O43316 | MIR93-201 | ENST00000385024 | 80 nt | BASIC | 2.99 | □□□□□ -1.93 | | |
| PAX4 | O43316 | TRDJ2-201 | ENST00000390475 | 54 nt | APPRIS P1 BASIC | 2.99 | □□□□□ -1.93 | | |
| PAX4 | O43316 | SNORA11B-201 | ENST00000408175 | 129 nt | BASIC | 2.99 | □□□□□ -1.93 | | |
| PAX4 | O43316 | LINC01341-201 | ENST00000419361 | 552 nt | TSL 2 BASIC | 2.99 | □□□□□ -1.93 | | |
| PAX4 | O43316 | AL157831.1-201 | ENST00000426134 | 473 nt | BASIC | 2.99 | □□□□□ -1.93 | | |
| PAX4 | O43316 | AL121760.1-201 | ENST00000447206 | 346 nt | TSL 2 BASIC | 2.99 | □□□□□ -1.93 | | |
| PAX4 | O43316 | AC023141.12-201 | ENST00000512399 | 199 nt | BASIC | 2.99 | □□□□□ -1.93 | | |
| PAX4 | O43316 | AL160314.2-204 | ENST00000554730 | 380 nt | TSL 5 BASIC | 2.99 | □□□□□ -1.93 | | |
| PAX4 | O43316 | AC012531.5-201 | ENST00000611375 | 151 nt | BASIC | 2.99 | □□□□□ -1.93 | | |
| PAX4 | O43316 | HOTAIRM1_4.1-201 | ENST00000617934 | 102 nt | BASIC | 2.99 | □□□□□ -1.93 | | |
| PAX4 | O43316 | MIR664A-201 | ENST00000626086 | 82 nt | BASIC | 2.99 | □□□□□ -1.93 | | |
| PAX4 | O43316 | AC012442.3-202 | ENST00000636742 | 206 nt | BASIC | 2.99 | □□□□□ -1.93 | | |
| PAX4 | O43316 | DST-201 | ENST00000244364 | 16742 nt | TSL 1 (best) BASIC | 2.99 | □□□□□ -1.93 | | |
| PAX4 | O43316 | RANBP2-201 | ENST00000283195 | 11711 nt | APPRIS P1 TSL 1 (best) BASIC | 2.99 | □□□□□ -1.93 | | |
| PAX4 | O43316 | SLC17A4-201 | ENST00000377905 | 3616 nt | APPRIS P1 TSL 1 (best) BASIC | 2.99 | □□□□□ -1.93 | | |
| PAX4 | O43316 | OR6P1-202 | ENST00000641540 | 3255 nt | APPRIS P1 BASIC | 2.99 | □□□□□ -1.93 | | |
| PAX4 | O43316 | DAZ4-202 | ENST00000382314 | 3910 nt | APPRIS ALT2 TSL 5 BASIC | 2.99 | □□□□□ -1.93 | | |
| PAX4 | O43316 | LUM-201 | ENST00000266718 | 3008 nt | APPRIS P1 TSL 1 (best) BASIC | 2.98 | □□□□□ -1.93 | | |
| PAX4 | O43316 | AL353746.1-201 | ENST00000566293 | 6881 nt | BASIC | 2.98 | □□□□□ -1.93 | | |
| PAX4 | O43316 | ADAM29-201 | ENST00000359240 | 3325 nt | APPRIS P1 TSL 2 BASIC | 2.98 | □□□□□ -1.93 | | |
| PAX4 | O43316 | LRRCC1-202 | ENST00000414626 | 4493 nt | APPRIS ALT2 TSL 1 (best) BASIC | 2.98 | □□□□□ -1.93 | | |
| PAX4 | O43316 | FER-201 | ENST00000281092 | 12119 nt | APPRIS P1 TSL 1 (best) BASIC | 2.98 | □□□□□ -1.93 | | |
| PAX4 | O43316 | AC005550.3-201 | ENST00000451240 | 3743 nt | TSL 1 (best) BASIC | 2.98 | □□□□□ -1.93 | | |
| PAX4 | O43316 | SLC16A10-201 | ENST00000368850 | 10051 nt | TSL 1 (best) BASIC | 2.98 | □□□□□ -1.93 | | |
| PAX4 | O43316 | RNU4-82P-201 | ENST00000362443 | 140 nt | BASIC | 2.98 | □□□□□ -1.93 | | |
| PAX4 | O43316 | RNU6-1313P-201 | ENST00000362622 | 102 nt | BASIC | 2.98 | □□□□□ -1.93 | | |
| PAX4 | O43316 | SNORD6-201 | ENST00000365444 | 73 nt | BASIC | 2.98 | □□□□□ -1.93 | | |
| PAX4 | O43316 | Y_RNA.410-201 | ENST00000383992 | 113 nt | BASIC | 2.98 | □□□□□ -1.93 | | |
| PAX4 | O43316 | RNU6-540P-201 | ENST00000384622 | 101 nt | BASIC | 2.98 | □□□□□ -1.93 | | |
| PAX4 | O43316 | STON1-GTF2A1L-202 | ENST00000394754 | 3824 nt | APPRIS P1 TSL 1 (best) BASIC | 2.98 | □□□□□ -1.93 | | |
| PAX4 | O43316 | MIR1283-1-201 | ENST00000408494 | 87 nt | BASIC | 2.98 | □□□□□ -1.93 | | |
| PAX4 | O43316 | Y_RNA.621-201 | ENST00000411065 | 96 nt | BASIC | 2.98 | □□□□□ -1.93 | | |
| PAX4 | O43316 | AC016397.1-201 | ENST00000412463 | 242 nt | BASIC | 2.98 | □□□□□ -1.93 | | |
| PAX4 | O43316 | LINC00894-201 | ENST00000413076 | 403 nt | TSL 3 BASIC | 2.98 | □□□□□ -1.93 | | |
| PAX4 | O43316 | YME1L1P1-201 | ENST00000429435 | 297 nt | BASIC | 2.98 | □□□□□ -1.93 | | |
| PAX4 | O43316 | AC009963.2-201 | ENST00000453431 | 138 nt | BASIC | 2.98 | □□□□□ -1.93 | | |
| PAX4 | O43316 | RNU6-687P-201 | ENST00000516443 | 89 nt | BASIC | 2.98 | □□□□□ -1.93 | | |
| PAX4 | O43316 | RNA5SP49-201 | ENST00000516450 | 115 nt | BASIC | 2.98 | □□□□□ -1.93 | | |
| PAX4 | O43316 | RNA5SP519-201 | ENST00000516480 | 119 nt | BASIC | 2.98 | □□□□□ -1.93 | | |
| PAX4 | O43316 | RNU7-70P-201 | ENST00000516941 | 66 nt | BASIC | 2.98 | □□□□□ -1.93 | | |
| PAX4 | O43316 | RNU6-1096P-201 | ENST00000517089 | 102 nt | BASIC | 2.98 | □□□□□ -1.93 | | |
| PAX4 | O43316 | AP004371.1-201 | ENST00000525240 | 214 nt | BASIC | 2.98 | □□□□□ -1.93 | | |
| PAX4 | O43316 | AC026992.1-202 | ENST00000558454 | 421 nt | TSL 3 BASIC | 2.98 | □□□□□ -1.93 | | |
| PAX4 | O43316 | AC011944.2-201 | ENST00000624440 | 683 nt | BASIC | 2.98 | □□□□□ -1.93 | | |
| PAX4 | O43316 | AL512310.12-203 | ENST00000640543 | 90 nt | BASIC | 2.98 | □□□□□ -1.93 | | |
| PAX4 | O43316 | KIAA0586-215 | ENST00000619722 | 5597 nt | APPRIS ALT2 TSL 2 BASIC | 2.98 | □□□□□ -1.93 | | |
| PAX4 | O43316 | RTTN-201 | ENST00000255674 | 6960 nt | TSL 5 BASIC | 2.98 | □□□□□ -1.93 | | |
| PAX4 | O43316 | BAZ2B-204 | ENST00000392783 | 8289 nt | APPRIS P1 TSL 5 BASIC | 2.98 | □□□□□ -1.93 | | |
| PAX4 | O43316 | SUCNR1-201 | ENST00000362032 | 4181 nt | APPRIS P1 TSL 1 (best) BASIC | 2.98 | □□□□□ -1.93 | | |
| PAX4 | O43316 | FAN1-202 | ENST00000561594 | 2738 nt | TSL 1 (best) BASIC | 2.98 | □□□□□ -1.93 | | |
| PAX4 | O43316 | CNTN6-201 | ENST00000350110 | 3814 nt | APPRIS P1 TSL 1 (best) BASIC | 2.97 | □□□□□ -1.93 | | |
| PAX4 | O43316 | USP26-201 | ENST00000370832 | 3642 nt | APPRIS P1 BASIC | 2.97 | □□□□□ -1.93 | | |
| PAX4 | O43316 | ERBIN-214 | ENST00000511297 | 4257 nt | APPRIS ALT1 TSL 5 BASIC | 2.97 | □□□□□ -1.93 | | |
| PAX4 | O43316 | MACC1-201 | ENST00000332878 | 2994 nt | APPRIS P1 TSL 1 (best) BASIC | 2.97 | □□□□□ -1.93 | | |
| PAX4 | O43316 | RNU6-1094P-201 | ENST00000362416 | 104 nt | BASIC | 2.97 | □□□□□ -1.93 | | |
| PAX4 | O43316 | Y_RNA.171-201 | ENST00000363760 | 102 nt | BASIC | 2.97 | □□□□□ -1.93 | | |
| PAX4 | O43316 | Y_RNA.351-201 | ENST00000365436 | 96 nt | BASIC | 2.97 | □□□□□ -1.93 | | |
| PAX4 | O43316 | RNA5SP167-201 | ENST00000365461 | 116 nt | BASIC | 2.97 | □□□□□ -1.93 | | |
| PAX4 | O43316 | RNU6-499P-201 | ENST00000365615 | 107 nt | BASIC | 2.97 | □□□□□ -1.93 | | |
| PAX4 | O43316 | RNU6-800P-201 | ENST00000384473 | 103 nt | BASIC | 2.97 | □□□□□ -1.93 | | |
| PAX4 | O43316 | MIR1290-201 | ENST00000408735 | 78 nt | BASIC | 2.97 | □□□□□ -1.93 | | |
| PAX4 | O43316 | RPL18P10-201 | ENST00000425606 | 538 nt | BASIC | 2.97 | □□□□□ -1.93 | | |
| PAX4 | O43316 | AL590383.1-201 | ENST00000428602 | 75 nt | BASIC | 2.97 | □□□□□ -1.93 | | |
| PAX4 | O43316 | RPS3P1-201 | ENST00000456781 | 192 nt | BASIC | 2.97 | □□□□□ -1.93 | | |
| PAX4 | O43316 | snoU13.14-201 | ENST00000459372 | 104 nt | BASIC | 2.97 | □□□□□ -1.93 | | |
| PAX4 | O43316 | HMGN1P7-201 | ENST00000491722 | 313 nt | BASIC | 2.97 | □□□□□ -1.93 | | |
| PAX4 | O43316 | AC006445.1-201 | ENST00000491925 | 405 nt | BASIC | 2.97 | □□□□□ -1.93 | | |
| PAX4 | O43316 | SNORA25.13-201 | ENST00000516395 | 103 nt | BASIC | 2.97 | □□□□□ -1.93 | | |
| PAX4 | O43316 | RNU6-1231P-201 | ENST00000517185 | 103 nt | BASIC | 2.97 | □□□□□ -1.93 | | |
| PAX4 | O43316 | RNU4-60P-201 | ENST00000517239 | 135 nt | BASIC | 2.97 | □□□□□ -1.93 | | |
| PAX4 | O43316 | AC069240.1-201 | ENST00000548774 | 375 nt | BASIC | 2.97 | □□□□□ -1.93 | | |
| PAX4 | O43316 | AC025271.3-201 | ENST00000563031 | 255 nt | TSL 5 BASIC | 2.97 | □□□□□ -1.93 | | |
| PAX4 | O43316 | RN7SL703P-201 | ENST00000578485 | 302 nt | BASIC | 2.97 | □□□□□ -1.93 | | |
| PAX4 | O43316 | AC130469.1-201 | ENST00000597256 | 388 nt | TSL 5 BASIC | 2.97 | □□□□□ -1.93 | | |
| PAX4 | O43316 | HNRNPDLP4-201 | ENST00000605144 | 301 nt | BASIC | 2.97 | □□□□□ -1.93 | | |
| PAX4 | O43316 | RNA5SP108-201 | ENST00000605921 | 117 nt | BASIC | 2.97 | □□□□□ -1.93 | | |
| PAX4 | O43316 | AC114781.5-201 | ENST00000615297 | 108 nt | BASIC | 2.97 | □□□□□ -1.93 | | |
| PAX4 | O43316 | AC244196.2-201 | ENST00000621184 | 411 nt | APPRIS P1 BASIC | 2.97 | □□□□□ -1.93 | | |
| PAX4 | O43316 | NFIA-AS1-206 | ENST00000630199 | 220 nt | TSL 5 BASIC | 2.97 | □□□□□ -1.93 | | |
| PAX4 | O43316 | RBMS2-209 | ENST00000639027 | 192 nt | TSL 5 BASIC | 2.97 | □□□□□ -1.93 | | |
| PAX4 | O43316 | MACF1-201 | ENST00000289893 | 19141 nt | TSL 5 BASIC | 2.97 | □□□□□ -1.93 | | |
| PAX4 | O43316 | DGKH-201 | ENST00000261491 | 17261 nt | TSL 1 (best) BASIC | 2.97 | □□□□□ -1.93 | | |
| PAX4 | O43316 | FAM35DP-201 | ENST00000323387 | 2712 nt | BASIC | 2.97 | □□□□□ -1.93 | | |
| PAX4 | O43316 | KIF21A-203 | ENST00000541463 | 4866 nt | TSL 1 (best) BASIC | 2.97 | □□□□□ -1.93 | | |
| PAX4 | O43316 | BCHE-201 | ENST00000264381 | 2454 nt | APPRIS P1 TSL 1 (best) BASIC | 2.96 | □□□□□ -1.94 | | |
| PAX4 | O43316 | ENPP2-202 | ENST00000259486 | 3233 nt | APPRIS P3 TSL 1 (best) BASIC | 2.96 | □□□□□ -1.94 | | |
| PAX4 | O43316 | NEB-201 | ENST00000172853 | 20634 nt | APPRIS ALT2 TSL 1 (best) BASIC | 2.96 | □□□□□ -1.94 | | |
| PAX4 | O43316 | MIR342-201 | ENST00000362212 | 99 nt | BASIC | 2.96 | □□□□□ -1.94 | | |