Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 MIR499B-201ENST00000636498 73 ntBASIC-0.86□□□□□ -2.55
CHD1O14646 MIR16-2-201ENST00000362117 81 ntBASIC-0.87□□□□□ -2.55
CHD1O14646 RNU5A-8P-201ENST00000364102 114 ntBASIC-0.87□□□□□ -2.55
CHD1O14646 Y_RNA.498-201ENST00000384460 102 ntBASIC-0.87□□□□□ -2.55
CHD1O14646 RNA5SP482-201ENST00000391269 118 ntBASIC-0.87□□□□□ -2.55
CHD1O14646 CALM2P4-201ENST00000430810 426 ntBASIC-0.87□□□□□ -2.55
CHD1O14646 AL049829.1-201ENST00000465411 156 ntBASIC-0.87□□□□□ -2.55
CHD1O14646 AC114755.3-201ENST00000481111 251 ntBASIC-0.87□□□□□ -2.55
CHD1O14646 RNA5SP461-201ENST00000516451 104 ntBASIC-0.87□□□□□ -2.55
CHD1O14646 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC-0.87□□□□□ -2.55
CHD1O14646 Y_RNA.181-201ENST00000363872 101 ntBASIC-0.88□□□□□ -2.55
CHD1O14646 MIR562-201ENST00000384894 95 ntBASIC-0.88□□□□□ -2.55
CHD1O14646 MIR760-201ENST00000390220 80 ntBASIC-0.88□□□□□ -2.55
CHD1O14646 RNA5SP163-201ENST00000410304 99 ntBASIC-0.88□□□□□ -2.55
CHD1O14646 AC087499.4-201ENST00000448505 178 ntBASIC-0.88□□□□□ -2.55
CHD1O14646 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC-0.88□□□□□ -2.55
CHD1O14646 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC-0.88□□□□□ -2.55
CHD1O14646 RNU7-129P-201ENST00000516128 62 ntBASIC-0.88□□□□□ -2.55
CHD1O14646 SCARNA17-201ENST00000516183 144 ntBASIC-0.88□□□□□ -2.55
CHD1O14646 RNU6-180P-201ENST00000516697 61 ntBASIC-0.88□□□□□ -2.55
CHD1O14646 AC025647.1-201ENST00000517879 253 ntBASIC-0.88□□□□□ -2.55
CHD1O14646 AC023050.3-201ENST00000541142 333 ntBASIC-0.88□□□□□ -2.55
CHD1O14646 AC010999.1-201ENST00000611856 324 ntBASIC-0.88□□□□□ -2.55
CHD1O14646 RNU6-925P-201ENST00000384629 104 ntBASIC-0.89□□□□□ -2.55
CHD1O14646 MIR454-201ENST00000390180 115 ntBASIC-0.89□□□□□ -2.55
CHD1O14646 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC-0.89□□□□□ -2.55
CHD1O14646 RNU6-221P-201ENST00000459541 99 ntBASIC-0.89□□□□□ -2.55
CHD1O14646 AC107401.1-201ENST00000503426 685 ntBASIC-0.89□□□□□ -2.55
CHD1O14646 RN7SKP164-201ENST00000516138 266 ntBASIC-0.89□□□□□ -2.55
CHD1O14646 RNU6-1225P-201ENST00000516336 65 ntBASIC-0.89□□□□□ -2.55
CHD1O14646 MIR4324-201ENST00000584846 72 ntBASIC-0.89□□□□□ -2.55
CHD1O14646 Y_RNA.168-201ENST00000363740 102 ntBASIC-0.89□□□□□ -2.55
CHD1O14646 Y_RNA.293-201ENST00000364908 93 ntBASIC-0.89□□□□□ -2.55
CHD1O14646 RNU6-580P-201ENST00000365159 107 ntBASIC-0.89□□□□□ -2.55
CHD1O14646 RNU6-364P-201ENST00000384387 107 ntBASIC-0.89□□□□□ -2.55
CHD1O14646 MIR526A1-201ENST00000384897 85 ntBASIC-0.89□□□□□ -2.55
CHD1O14646 RNU2-3P-201ENST00000410144 191 ntBASIC-0.89□□□□□ -2.55
CHD1O14646 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC-0.89□□□□□ -2.55
CHD1O14646 AC005042.3-201ENST00000453230 174 ntBASIC-0.89□□□□□ -2.55
CHD1O14646 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC-0.89□□□□□ -2.55
CHD1O14646 MIR548AC-201ENST00000585049 88 ntBASIC-0.89□□□□□ -2.55
CHD1O14646 FGFR1OP2P1-201ENST00000395943 500 ntBASIC-0.9□□□□□ -2.55
CHD1O14646 RNU6-613P-201ENST00000410412 108 ntBASIC-0.9□□□□□ -2.55
CHD1O14646 AC012306.1-201ENST00000423267 114 ntBASIC-0.9□□□□□ -2.55
CHD1O14646 Z98949.2-201ENST00000440996 144 ntBASIC-0.9□□□□□ -2.55
CHD1O14646 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC-0.9□□□□□ -2.55
CHD1O14646 RNU7-43P-201ENST00000516554 64 ntBASIC-0.9□□□□□ -2.55
CHD1O14646 AC018462.2-201ENST00000605375 395 ntBASIC-0.9□□□□□ -2.55
CHD1O14646 AC027279.3-201ENST00000625055 122 ntBASIC-0.9□□□□□ -2.55
CHD1O14646 AC073343.1-201ENST00000328239 651 ntBASIC-0.91□□□□□ -2.55
CHD1O14646 RNU6-552P-201ENST00000362869 119 ntBASIC-0.91□□□□□ -2.55
CHD1O14646 SNORA36.1-201ENST00000363424 132 ntBASIC-0.91□□□□□ -2.55
CHD1O14646 MIR196A1-201ENST00000388006 70 ntBASIC-0.91□□□□□ -2.55
CHD1O14646 MTND4P32-201ENST00000437189 1237 ntBASIC-0.91□□□□□ -2.55
CHD1O14646 AC007327.1-201ENST00000447461 264 ntBASIC-0.91□□□□□ -2.55
CHD1O14646 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC-0.91□□□□□ -2.55
CHD1O14646 RNU7-41P-201ENST00000515917 61 ntBASIC-0.91□□□□□ -2.55
CHD1O14646 AC027288.2-201ENST00000553028 243 ntBASIC-0.91□□□□□ -2.55
CHD1O14646 MIR5708-201ENST00000579723 85 ntBASIC-0.91□□□□□ -2.55
CHD1O14646 snoZ196.1-201ENST00000625269 89 ntBASIC-0.91□□□□□ -2.55
CHD1O14646 Y_RNA.567-201ENST00000384736 106 ntBASIC-0.92□□□□□ -2.56
CHD1O14646 SNORA26.3-201ENST00000391119 136 ntBASIC-0.92□□□□□ -2.56
CHD1O14646 RNU6-1093P-201ENST00000391194 107 ntBASIC-0.92□□□□□ -2.56
CHD1O14646 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC-0.92□□□□□ -2.56
CHD1O14646 AC092809.3-201ENST00000415453 231 ntBASIC-0.92□□□□□ -2.56
CHD1O14646 RPS29P27-201ENST00000463711 170 ntBASIC-0.92□□□□□ -2.56
CHD1O14646 AC108729.2-201ENST00000476543 840 ntBASIC-0.92□□□□□ -2.56
CHD1O14646 RPL39P34-201ENST00000477141 156 ntBASIC-0.92□□□□□ -2.56
CHD1O14646 MTCO3P27-201ENST00000514397 196 ntBASIC-0.92□□□□□ -2.56
CHD1O14646 AC022616.3-201ENST00000523940 148 ntBASIC-0.92□□□□□ -2.56
CHD1O14646 AC087894.1-201ENST00000538359 518 ntBASIC-0.92□□□□□ -2.56
CHD1O14646 AC012467.1-201ENST00000607740 256 ntBASIC-0.92□□□□□ -2.56
CHD1O14646 Six3os1_7.1-201ENST00000621512 201 ntBASIC-0.92□□□□□ -2.56
CHD1O14646 MIRLET7C-201ENST00000362160 84 ntBASIC-0.92□□□□□ -2.56
CHD1O14646 RNU6-25P-201ENST00000383873 107 ntBASIC-0.92□□□□□ -2.56
CHD1O14646 RNU6-29P-201ENST00000384637 107 ntBASIC-0.92□□□□□ -2.56
CHD1O14646 MIR586-201ENST00000385035 97 ntBASIC-0.92□□□□□ -2.56
CHD1O14646 MIR136-201ENST00000385207 82 ntBASIC-0.92□□□□□ -2.56
CHD1O14646 USP9YP11-201ENST00000427537 717 ntBASIC-0.92□□□□□ -2.56
CHD1O14646 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC-0.92□□□□□ -2.56
CHD1O14646 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC-0.92□□□□□ -2.56
CHD1O14646 AL596327.1-201ENST00000603629 213 ntBASIC-0.92□□□□□ -2.56
CHD1O14646 uc_338.28-201ENST00000612082 187 ntBASIC-0.92□□□□□ -2.56
CHD1O14646 AC104260.1-201ENST00000616660 539 ntBASIC-0.92□□□□□ -2.56
CHD1O14646 AC006504.8-201ENST00000621046 635 ntBASIC-0.92□□□□□ -2.56
CHD1O14646 SNORD32A-201ENST00000364805 84 ntBASIC-0.93□□□□□ -2.56
CHD1O14646 Y_RNA.439-201ENST00000384119 94 ntBASIC-0.93□□□□□ -2.56
CHD1O14646 MIR208B-201ENST00000401172 77 ntBASIC-0.93□□□□□ -2.56
CHD1O14646 RPS24P1-201ENST00000438550 371 ntBASIC-0.93□□□□□ -2.56
CHD1O14646 PCNPP5-201ENST00000452246 481 ntBASIC-0.93□□□□□ -2.56
CHD1O14646 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC-0.93□□□□□ -2.56
CHD1O14646 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC-0.93□□□□□ -2.56
CHD1O14646 RNU6-123P-201ENST00000516163 102 ntBASIC-0.93□□□□□ -2.56
CHD1O14646 MIR3146-201ENST00000580367 79 ntBASIC-0.93□□□□□ -2.56
CHD1O14646 AC012433.1-201ENST00000588916 398 ntBASIC-0.93□□□□□ -2.56
CHD1O14646 MIR1185-2-201ENST00000408687 86 ntBASIC-0.94□□□□□ -2.56
CHD1O14646 MLLT10P1-201ENST00000418346 262 ntBASIC-0.94□□□□□ -2.56
CHD1O14646 AC008134.1-201ENST00000420943 193 ntBASIC-0.94□□□□□ -2.56
CHD1O14646 AL953862.1-201ENST00000423016 168 ntBASIC-0.94□□□□□ -2.56
CHD1O14646 SEPT14P24-201ENST00000447236 180 ntBASIC-0.94□□□□□ -2.56
Retrieved 100 of 98,524 protein–RNA pairs in 108.9 ms