Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.55□□□□□ -2
FOXN3O00409 AC046143.2-201ENST00000609789 160 ntBASIC2.55□□□□□ -2
FOXN3O00409 AL137847.3-201ENST00000611521 109 ntBASIC2.55□□□□□ -2
FOXN3O00409 MIR1291-201ENST00000627649 87 ntBASIC2.55□□□□□ -2
FOXN3O00409 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.55□□□□□ -2
FOXN3O00409 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.55□□□□□ -2
FOXN3O00409 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
FOXN3O00409 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.55□□□□□ -2
FOXN3O00409 Y_RNA.257-201ENST00000364596 102 ntBASIC2.54□□□□□ -2
FOXN3O00409 Y_RNA.541-201ENST00000384640 113 ntBASIC2.54□□□□□ -2
FOXN3O00409 MIR548B-201ENST00000385247 97 ntBASIC2.54□□□□□ -2
FOXN3O00409 SNORD115-46-201ENST00000390982 71 ntBASIC2.54□□□□□ -2
FOXN3O00409 AL355497.1-201ENST00000406262 551 ntBASIC2.54□□□□□ -2
FOXN3O00409 RNU6-57P-201ENST00000411348 103 ntBASIC2.54□□□□□ -2
FOXN3O00409 AC245102.2-201ENST00000448956 180 ntBASIC2.54□□□□□ -2
FOXN3O00409 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC2.54□□□□□ -2
FOXN3O00409 RNU6-625P-201ENST00000459412 107 ntBASIC2.54□□□□□ -2
FOXN3O00409 AC074133.1-201ENST00000515696 183 ntBASIC2.54□□□□□ -2
FOXN3O00409 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC2.54□□□□□ -2
FOXN3O00409 U6.104-201ENST00000637979 90 ntBASIC2.54□□□□□ -2
FOXN3O00409 LINC02555-201ENST00000563933 1951 ntBASIC2.53□□□□□ -2
FOXN3O00409 SNORA20.1-201ENST00000364790 130 ntBASIC2.53□□□□□ -2
FOXN3O00409 Y_RNA.332-201ENST00000365271 113 ntBASIC2.53□□□□□ -2
FOXN3O00409 SNORA67.2-201ENST00000384300 149 ntBASIC2.53□□□□□ -2
FOXN3O00409 MIR586-201ENST00000385035 97 ntBASIC2.53□□□□□ -2
FOXN3O00409 MRPL35P1-201ENST00000404272 572 ntBASIC2.53□□□□□ -2
FOXN3O00409 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC2.53□□□□□ -2
FOXN3O00409 AC010531.2-201ENST00000465012 153 ntBASIC2.53□□□□□ -2
FOXN3O00409 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.53□□□□□ -2
FOXN3O00409 AC018448.1-201ENST00000552843 316 ntBASIC2.53□□□□□ -2
FOXN3O00409 MIR6840-201ENST00000611937 71 ntBASIC2.53□□□□□ -2
FOXN3O00409 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.53□□□□□ -2
FOXN3O00409 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.53□□□□□ -2
FOXN3O00409 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC2.53□□□□□ -2
FOXN3O00409 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.53□□□□□ -2
FOXN3O00409 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
FOXN3O00409 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
FOXN3O00409 AL391987.6-201ENST00000305671 199 ntBASIC2.52□□□□□ -2.01
FOXN3O00409 MIR449A-201ENST00000362113 91 ntBASIC2.52□□□□□ -2.01
FOXN3O00409 Y_RNA.99-201ENST00000363138 105 ntBASIC2.52□□□□□ -2.01
FOXN3O00409 RNU6-961P-201ENST00000363893 105 ntBASIC2.52□□□□□ -2.01
FOXN3O00409 Y_RNA.286-201ENST00000364813 102 ntBASIC2.52□□□□□ -2.01
FOXN3O00409 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.52□□□□□ -2.01
FOXN3O00409 AC096920.1-201ENST00000423991 241 ntBASIC2.52□□□□□ -2.01
FOXN3O00409 AC005002.2-201ENST00000438228 269 ntBASIC2.52□□□□□ -2.01
FOXN3O00409 SNORA31.11-201ENST00000516528 139 ntBASIC2.52□□□□□ -2.01
FOXN3O00409 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC2.52□□□□□ -2.01
FOXN3O00409 AC021269.2-201ENST00000532318 330 ntBASIC2.52□□□□□ -2.01
FOXN3O00409 AC103810.6-201ENST00000606708 136 ntBASIC2.52□□□□□ -2.01
FOXN3O00409 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.52□□□□□ -2.01
FOXN3O00409 AL590240.4-201ENST00000616908 390 ntBASIC2.52□□□□□ -2.01
FOXN3O00409 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.52□□□□□ -2.01
FOXN3O00409 AC006001.4-201ENST00000622243 395 ntBASIC2.52□□□□□ -2.01
FOXN3O00409 AC008873.1-201ENST00000625051 138 ntBASIC2.52□□□□□ -2.01
FOXN3O00409 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.52□□□□□ -2.01
FOXN3O00409 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.52□□□□□ -2.01
FOXN3O00409 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.52□□□□□ -2.01
FOXN3O00409 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
FOXN3O00409 RNU6-160P-201ENST00000384591 107 ntBASIC2.51□□□□□ -2.01
FOXN3O00409 Y_RNA.562-201ENST00000384695 113 ntBASIC2.51□□□□□ -2.01
FOXN3O00409 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
FOXN3O00409 RNU6-847P-201ENST00000411115 108 ntBASIC2.51□□□□□ -2.01
FOXN3O00409 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.51□□□□□ -2.01
FOXN3O00409 Z98949.2-201ENST00000440996 144 ntBASIC2.51□□□□□ -2.01
FOXN3O00409 AL513328.1-201ENST00000446460 224 ntBASIC2.51□□□□□ -2.01
FOXN3O00409 NDUFB4P10-201ENST00000452541 359 ntBASIC2.51□□□□□ -2.01
FOXN3O00409 RPL23AP3-201ENST00000453844 468 ntBASIC2.51□□□□□ -2.01
FOXN3O00409 RNU6-1023P-201ENST00000516137 106 ntBASIC2.51□□□□□ -2.01
FOXN3O00409 RNU6-1338P-201ENST00000516328 91 ntBASIC2.51□□□□□ -2.01
FOXN3O00409 RNU6-111P-201ENST00000517179 105 ntBASIC2.51□□□□□ -2.01
FOXN3O00409 AK6P2-201ENST00000549020 471 ntBASIC2.51□□□□□ -2.01
FOXN3O00409 AL442067.1-201ENST00000613261 223 ntBASIC2.51□□□□□ -2.01
FOXN3O00409 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC2.51□□□□□ -2.01
FOXN3O00409 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.51□□□□□ -2.01
FOXN3O00409 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
FOXN3O00409 AL596028.1-201ENST00000326971 197 ntBASIC2.5□□□□□ -2.01
FOXN3O00409 SNORD114-6-201ENST00000364393 72 ntBASIC2.5□□□□□ -2.01
FOXN3O00409 Y_RNA.462-201ENST00000384268 102 ntBASIC2.5□□□□□ -2.01
FOXN3O00409 RNU6-975P-201ENST00000384296 105 ntBASIC2.5□□□□□ -2.01
FOXN3O00409 Y_RNA.552-201ENST00000384665 112 ntBASIC2.5□□□□□ -2.01
FOXN3O00409 AL603910.2-201ENST00000407268 136 ntBASIC2.5□□□□□ -2.01
FOXN3O00409 ELOCP21-201ENST00000412558 336 ntBASIC2.5□□□□□ -2.01
FOXN3O00409 BX510359.4-201ENST00000423750 193 ntBASIC2.5□□□□□ -2.01
FOXN3O00409 RPS15AP28-201ENST00000435088 386 ntBASIC2.5□□□□□ -2.01
FOXN3O00409 CR769767.1-201ENST00000436337 346 ntBASIC2.5□□□□□ -2.01
FOXN3O00409 AC018634.1-201ENST00000437554 401 ntBASIC2.5□□□□□ -2.01
FOXN3O00409 HSPE1P25-201ENST00000455484 251 ntBASIC2.5□□□□□ -2.01
FOXN3O00409 RPL26P26-201ENST00000480251 434 ntBASIC2.5□□□□□ -2.01
FOXN3O00409 RNU6-948P-201ENST00000516374 107 ntBASIC2.5□□□□□ -2.01
FOXN3O00409 RNU7-193P-201ENST00000516723 65 ntBASIC2.5□□□□□ -2.01
FOXN3O00409 RNU7-110P-201ENST00000516891 62 ntBASIC2.5□□□□□ -2.01
FOXN3O00409 RNA5SP402-201ENST00000517148 110 ntBASIC2.5□□□□□ -2.01
FOXN3O00409 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.5□□□□□ -2.01
FOXN3O00409 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.5□□□□□ -2.01
FOXN3O00409 MIR3162-201ENST00000581818 82 ntBASIC2.5□□□□□ -2.01
FOXN3O00409 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.5□□□□□ -2.01
FOXN3O00409 AL109918.3-201ENST00000603072 338 ntBASIC2.5□□□□□ -2.01
FOXN3O00409 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
FOXN3O00409 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.5□□□□□ -2.01
FOXN3O00409 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.5□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 116.7 ms