Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC1.37□□□□□ -2.19
SLC28A1O00337 RNU7-87P-201ENST00000459343 62 ntBASIC1.37□□□□□ -2.19
SLC28A1O00337 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.37□□□□□ -2.19
SLC28A1O00337 RPL7P42-201ENST00000481005 679 ntBASIC1.37□□□□□ -2.19
SLC28A1O00337 CYCSP23-201ENST00000519781 313 ntBASIC1.37□□□□□ -2.19
SLC28A1O00337 AC105029.1-201ENST00000520250 669 ntBASIC1.37□□□□□ -2.19
SLC28A1O00337 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
SLC28A1O00337 PISRT1.1-201ENST00000616930 107 ntBASIC1.37□□□□□ -2.19
SLC28A1O00337 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.37□□□□□ -2.19
SLC28A1O00337 RNU6-1123P-201ENST00000362347 106 ntBASIC1.36□□□□□ -2.19
SLC28A1O00337 Y_RNA.88-201ENST00000363029 99 ntBASIC1.36□□□□□ -2.19
SLC28A1O00337 Y_RNA.339-201ENST00000365325 102 ntBASIC1.36□□□□□ -2.19
SLC28A1O00337 RNU6-1065P-201ENST00000384513 106 ntBASIC1.36□□□□□ -2.19
SLC28A1O00337 MIR513A1-201ENST00000385138 129 ntBASIC1.36□□□□□ -2.19
SLC28A1O00337 SNORA67.5-201ENST00000391036 107 ntBASIC1.36□□□□□ -2.19
SLC28A1O00337 RPS27P16-201ENST00000425758 201 ntBASIC1.36□□□□□ -2.19
SLC28A1O00337 AC010154.1-201ENST00000425857 269 ntBASIC1.36□□□□□ -2.19
SLC28A1O00337 EIF1P2-201ENST00000428233 350 ntBASIC1.36□□□□□ -2.19
SLC28A1O00337 AC245047.3-201ENST00000429428 127 ntBASIC1.36□□□□□ -2.19
SLC28A1O00337 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.36□□□□□ -2.19
SLC28A1O00337 UQCRBP2-201ENST00000447827 297 ntBASIC1.36□□□□□ -2.19
SLC28A1O00337 MTND3P10-201ENST00000450967 341 ntBASIC1.36□□□□□ -2.19
SLC28A1O00337 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.36□□□□□ -2.19
SLC28A1O00337 RNU7-99P-201ENST00000516271 62 ntBASIC1.36□□□□□ -2.19
SLC28A1O00337 RNA5SP61-201ENST00000516453 100 ntBASIC1.36□□□□□ -2.19
SLC28A1O00337 RNU6-307P-201ENST00000516743 106 ntBASIC1.36□□□□□ -2.19
SLC28A1O00337 MTND4LP26-201ENST00000518144 282 ntBASIC1.36□□□□□ -2.19
SLC28A1O00337 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.36□□□□□ -2.19
SLC28A1O00337 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.36□□□□□ -2.19
SLC28A1O00337 AL442163.3-201ENST00000554110 156 ntBASIC1.36□□□□□ -2.19
SLC28A1O00337 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.36□□□□□ -2.19
SLC28A1O00337 AC005899.2-201ENST00000584353 90 ntBASIC1.36□□□□□ -2.19
SLC28A1O00337 AC125232.2-201ENST00000592457 143 ntBASIC1.36□□□□□ -2.19
SLC28A1O00337 AC022217.4-201ENST00000604389 163 ntBASIC1.36□□□□□ -2.19
SLC28A1O00337 AC006435.5-201ENST00000624486 112 ntBASIC1.36□□□□□ -2.19
SLC28A1O00337 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.36□□□□□ -2.19
SLC28A1O00337 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
SLC28A1O00337 RNU6-767P-201ENST00000384132 107 ntBASIC1.35□□□□□ -2.19
SLC28A1O00337 RN7SKP200-201ENST00000410564 320 ntBASIC1.35□□□□□ -2.19
SLC28A1O00337 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC1.35□□□□□ -2.19
SLC28A1O00337 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.35□□□□□ -2.19
SLC28A1O00337 UBE2V1P7-201ENST00000446395 340 ntBASIC1.35□□□□□ -2.19
SLC28A1O00337 SNORD65B-201ENST00000459126 73 ntBASIC1.35□□□□□ -2.19
SLC28A1O00337 AC099513.1-201ENST00000490423 301 ntBASIC1.35□□□□□ -2.19
SLC28A1O00337 RNU7-30P-201ENST00000516835 62 ntBASIC1.35□□□□□ -2.19
SLC28A1O00337 RNU7-128P-201ENST00000517247 62 ntBASIC1.35□□□□□ -2.19
SLC28A1O00337 AC027419.1-201ENST00000522976 328 ntBASIC1.35□□□□□ -2.19
SLC28A1O00337 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC1.35□□□□□ -2.19
SLC28A1O00337 AC015720.1-201ENST00000565251 277 ntBASIC1.35□□□□□ -2.19
SLC28A1O00337 MIR4438-201ENST00000585271 93 ntBASIC1.35□□□□□ -2.19
SLC28A1O00337 AC021506.2-201ENST00000612354 169 ntBASIC1.35□□□□□ -2.19
SLC28A1O00337 AC040896.1-201ENST00000613819 479 ntBASIC1.35□□□□□ -2.19
SLC28A1O00337 MIR7974-201ENST00000615835 79 ntBASIC1.35□□□□□ -2.19
SLC28A1O00337 AC005858.4-201ENST00000623191 700 ntBASIC1.35□□□□□ -2.19
SLC28A1O00337 CASC19-280ENST00000642102 1351 ntBASIC1.34□□□□□ -2.19
SLC28A1O00337 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.34□□□□□ -2.19
SLC28A1O00337 Y_RNA.160-201ENST00000363677 92 ntBASIC1.34□□□□□ -2.19
SLC28A1O00337 RNU4-13P-201ENST00000364019 141 ntBASIC1.34□□□□□ -2.19
SLC28A1O00337 RNU6-1264P-201ENST00000383891 107 ntBASIC1.34□□□□□ -2.19
SLC28A1O00337 RNU6-1031P-201ENST00000384773 107 ntBASIC1.34□□□□□ -2.19
SLC28A1O00337 MIR329-1-201ENST00000385028 80 ntBASIC1.34□□□□□ -2.19
SLC28A1O00337 AL135790.2-201ENST00000437701 267 ntBASIC1.34□□□□□ -2.19
SLC28A1O00337 MRPS10P1-201ENST00000448483 130 ntBASIC1.34□□□□□ -2.19
SLC28A1O00337 SNORD13-201ENST00000459299 104 ntBASIC1.34□□□□□ -2.19
SLC28A1O00337 RNU7-94P-201ENST00000459576 63 ntBASIC1.34□□□□□ -2.19
SLC28A1O00337 RPS27P22-201ENST00000478056 241 ntBASIC1.34□□□□□ -2.19
SLC28A1O00337 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC1.34□□□□□ -2.19
SLC28A1O00337 AC010598.1-201ENST00000510378 103 ntBASIC1.34□□□□□ -2.19
SLC28A1O00337 SNORA31.10-201ENST00000516482 106 ntBASIC1.34□□□□□ -2.19
SLC28A1O00337 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC1.34□□□□□ -2.19
SLC28A1O00337 AC004584.2-201ENST00000570407 410 ntBASIC1.34□□□□□ -2.19
SLC28A1O00337 AC092794.1-201ENST00000612734 582 ntBASIC1.34□□□□□ -2.19
SLC28A1O00337 AL078604.3-201ENST00000615580 211 ntBASIC1.34□□□□□ -2.19
SLC28A1O00337 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.34□□□□□ -2.19
SLC28A1O00337 MIR8054-201ENST00000620877 86 ntBASIC1.34□□□□□ -2.19
SLC28A1O00337 AC099654.5-201ENST00000636479 350 ntBASIC1.34□□□□□ -2.19
SLC28A1O00337 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.34□□□□□ -2.19
SLC28A1O00337 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.34□□□□□ -2.2
SLC28A1O00337 RNU6-874P-201ENST00000362390 105 ntBASIC1.33□□□□□ -2.2
SLC28A1O00337 RNU6-879P-201ENST00000364328 108 ntBASIC1.33□□□□□ -2.2
SLC28A1O00337 RNA5SP259-201ENST00000365541 109 ntBASIC1.33□□□□□ -2.2
SLC28A1O00337 MRPL42P3-201ENST00000401492 326 ntBASIC1.33□□□□□ -2.2
SLC28A1O00337 AC092423.1-201ENST00000430165 186 ntBASIC1.33□□□□□ -2.2
SLC28A1O00337 RPL23AP50-201ENST00000434149 455 ntBASIC1.33□□□□□ -2.2
SLC28A1O00337 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.33□□□□□ -2.2
SLC28A1O00337 AC010469.2-201ENST00000496412 480 ntBASIC1.33□□□□□ -2.2
SLC28A1O00337 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC1.33□□□□□ -2.2
SLC28A1O00337 AC116353.2-201ENST00000505332 712 ntBASIC1.33□□□□□ -2.2
SLC28A1O00337 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC1.33□□□□□ -2.2
SLC28A1O00337 AC023157.2-201ENST00000540596 141 ntBASIC1.33□□□□□ -2.2
SLC28A1O00337 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.33□□□□□ -2.2
SLC28A1O00337 AC104260.1-201ENST00000616660 539 ntBASIC1.33□□□□□ -2.2
SLC28A1O00337 AL161722.3-201ENST00000605789 2983 ntBASIC1.32□□□□□ -2.2
SLC28A1O00337 Y_RNA.404-201ENST00000383978 102 ntBASIC1.32□□□□□ -2.2
SLC28A1O00337 Y_RNA.557-201ENST00000384680 107 ntBASIC1.32□□□□□ -2.2
SLC28A1O00337 MIR758-201ENST00000390227 88 ntBASIC1.32□□□□□ -2.2
SLC28A1O00337 RNU6-440P-201ENST00000390882 105 ntBASIC1.32□□□□□ -2.2
SLC28A1O00337 Y_RNA.619-201ENST00000410951 90 ntBASIC1.32□□□□□ -2.2
SLC28A1O00337 SNX2P2-201ENST00000424553 323 ntBASIC1.32□□□□□ -2.2
SLC28A1O00337 SCARNA16.2-201ENST00000516520 172 ntBASIC1.32□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms