Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 AC117454.1-201ENST00000491120 168 ntBASIC0.63□□□□□ -2.31
UPK1AO00322 MTCO2P30-201ENST00000503662 364 ntBASIC0.63□□□□□ -2.31
UPK1AO00322 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC0.63□□□□□ -2.31
UPK1AO00322 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC0.63□□□□□ -2.31
UPK1AO00322 AL121579.1-201ENST00000555129 305 ntBASIC0.63□□□□□ -2.31
UPK1AO00322 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC0.63□□□□□ -2.31
UPK1AO00322 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.63□□□□□ -2.31
UPK1AO00322 AC119751.7-201ENST00000600494 245 ntBASIC0.63□□□□□ -2.31
UPK1AO00322 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.63□□□□□ -2.31
UPK1AO00322 FAM157A-202ENST00000615155 405 ntBASIC0.63□□□□□ -2.31
UPK1AO00322 AC078883.4-201ENST00000623218 367 ntBASIC0.63□□□□□ -2.31
UPK1AO00322 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.63□□□□□ -2.31
UPK1AO00322 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.62□□□□□ -2.31
UPK1AO00322 RNU6-1085P-201ENST00000363576 107 ntBASIC0.62□□□□□ -2.31
UPK1AO00322 RNU6-1042P-201ENST00000384204 107 ntBASIC0.62□□□□□ -2.31
UPK1AO00322 MIR514A2-201ENST00000385131 88 ntBASIC0.62□□□□□ -2.31
UPK1AO00322 MIR514A3-201ENST00000385132 88 ntBASIC0.62□□□□□ -2.31
UPK1AO00322 MIR653-201ENST00000385279 96 ntBASIC0.62□□□□□ -2.31
UPK1AO00322 SNORD41-201ENST00000386967 70 ntBASIC0.62□□□□□ -2.31
UPK1AO00322 SNORA12.1-201ENST00000390873 148 ntBASIC0.62□□□□□ -2.31
UPK1AO00322 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC0.62□□□□□ -2.31
UPK1AO00322 MTCO1P20-201ENST00000425366 358 ntBASIC0.62□□□□□ -2.31
UPK1AO00322 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.62□□□□□ -2.31
UPK1AO00322 MRPS10P1-201ENST00000448483 130 ntBASIC0.62□□□□□ -2.31
UPK1AO00322 TPT1P7-201ENST00000458300 517 ntBASIC0.62□□□□□ -2.31
UPK1AO00322 AC010469.2-201ENST00000496412 480 ntBASIC0.62□□□□□ -2.31
UPK1AO00322 TRBVA-201ENST00000498804 316 ntBASIC0.62□□□□□ -2.31
UPK1AO00322 ACA59.1-201ENST00000515966 143 ntBASIC0.62□□□□□ -2.31
UPK1AO00322 RNU2-56P-201ENST00000516826 190 ntBASIC0.62□□□□□ -2.31
UPK1AO00322 AC023157.2-201ENST00000540596 141 ntBASIC0.62□□□□□ -2.31
UPK1AO00322 AC027288.2-201ENST00000553028 243 ntBASIC0.62□□□□□ -2.31
UPK1AO00322 CYP3A137P-201ENST00000562436 69 ntBASIC0.62□□□□□ -2.31
UPK1AO00322 MIR4653-201ENST00000585107 83 ntBASIC0.62□□□□□ -2.31
UPK1AO00322 AC080078.2-201ENST00000603766 501 ntBASIC0.62□□□□□ -2.31
UPK1AO00322 AC068137.4-201ENST00000638485 296 ntBASIC0.62□□□□□ -2.31
UPK1AO00322 RNU6-254P-201ENST00000363377 107 ntBASIC0.61□□□□□ -2.31
UPK1AO00322 Y_RNA.167-201ENST00000363735 109 ntBASIC0.61□□□□□ -2.31
UPK1AO00322 Y_RNA.179-201ENST00000363844 90 ntBASIC0.61□□□□□ -2.31
UPK1AO00322 SNORA2.2-201ENST00000365473 135 ntBASIC0.61□□□□□ -2.31
UPK1AO00322 Y_RNA.359-201ENST00000365498 102 ntBASIC0.61□□□□□ -2.31
UPK1AO00322 Y_RNA.553-201ENST00000384670 102 ntBASIC0.61□□□□□ -2.31
UPK1AO00322 MIR562-201ENST00000384894 95 ntBASIC0.61□□□□□ -2.31
UPK1AO00322 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.61□□□□□ -2.31
UPK1AO00322 RPS3AP1-201ENST00000413190 320 ntBASIC0.61□□□□□ -2.31
UPK1AO00322 ERLEC1P1-201ENST00000433806 578 ntBASIC0.61□□□□□ -2.31
UPK1AO00322 NDUFA5P4-201ENST00000436704 385 ntBASIC0.61□□□□□ -2.31
UPK1AO00322 DAP3P1-201ENST00000441522 278 ntBASIC0.61□□□□□ -2.31
UPK1AO00322 MTCO1P19-201ENST00000443487 500 ntBASIC0.61□□□□□ -2.31
UPK1AO00322 MTND4P18-201ENST00000447010 465 ntBASIC0.61□□□□□ -2.31
UPK1AO00322 SNORD65B-201ENST00000459126 73 ntBASIC0.61□□□□□ -2.31
UPK1AO00322 AC091179.3-201ENST00000474761 144 ntBASIC0.61□□□□□ -2.31
UPK1AO00322 RNU6-107P-201ENST00000516643 102 ntBASIC0.61□□□□□ -2.31
UPK1AO00322 RNU6-197P-201ENST00000516680 100 ntBASIC0.61□□□□□ -2.31
UPK1AO00322 AL590705.4-201ENST00000532209 134 ntBASIC0.61□□□□□ -2.31
UPK1AO00322 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC0.61□□□□□ -2.31
UPK1AO00322 RPL21P9-201ENST00000556149 474 ntBASIC0.61□□□□□ -2.31
UPK1AO00322 AC006362.1-201ENST00000567392 174 ntBASIC0.61□□□□□ -2.31
UPK1AO00322 AL590095.2-201ENST00000604136 117 ntBASIC0.61□□□□□ -2.31
UPK1AO00322 RNU6-89P-201ENST00000606519 100 ntBASIC0.61□□□□□ -2.31
UPK1AO00322 AC063944.3-201ENST00000609969 533 ntBASIC0.61□□□□□ -2.31
UPK1AO00322 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC0.61□□□□□ -2.31
UPK1AO00322 AC006435.5-201ENST00000624486 112 ntBASIC0.61□□□□□ -2.31
UPK1AO00322 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC0.61□□□□□ -2.31
UPK1AO00322 MIR6079-201ENST00000635807 62 ntBASIC0.61□□□□□ -2.31
UPK1AO00322 MIR6863-201ENST00000636112 90 ntBASIC0.61□□□□□ -2.31
UPK1AO00322 AC099654.12-201ENST00000639868 649 ntBASIC0.61□□□□□ -2.31
UPK1AO00322 ELL2P3-201ENST00000457883 1602 ntBASIC0.6□□□□□ -2.31
UPK1AO00322 Y_RNA.373-201ENST00000365600 103 ntBASIC0.6□□□□□ -2.31
UPK1AO00322 RNU6-424P-201ENST00000384367 105 ntBASIC0.6□□□□□ -2.31
UPK1AO00322 MIR608-201ENST00000384820 100 ntBASIC0.6□□□□□ -2.31
UPK1AO00322 MIR508-201ENST00000384857 115 ntBASIC0.6□□□□□ -2.31
UPK1AO00322 MIR100-201ENST00000385259 80 ntBASIC0.6□□□□□ -2.31
UPK1AO00322 AF228730.1-201ENST00000397972 663 ntBASIC0.6□□□□□ -2.31
UPK1AO00322 RNU6-648P-201ENST00000410190 107 ntBASIC0.6□□□□□ -2.31
UPK1AO00322 AC114482.1-201ENST00000418010 247 ntBASIC0.6□□□□□ -2.31
UPK1AO00322 CALM2P4-201ENST00000430810 426 ntBASIC0.6□□□□□ -2.31
UPK1AO00322 RPS29P1-201ENST00000465274 159 ntBASIC0.6□□□□□ -2.31
UPK1AO00322 AC010424.1-201ENST00000506336 297 ntBASIC0.6□□□□□ -2.31
UPK1AO00322 RNU7-12P-201ENST00000516030 62 ntBASIC0.6□□□□□ -2.31
UPK1AO00322 AP003484.1-201ENST00000530974 250 ntBASIC0.6□□□□□ -2.31
UPK1AO00322 AK6P2-201ENST00000549020 471 ntBASIC0.6□□□□□ -2.31
UPK1AO00322 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.6□□□□□ -2.31
UPK1AO00322 AL158211.1-201ENST00000566763 763 ntBASIC0.6□□□□□ -2.31
UPK1AO00322 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC0.6□□□□□ -2.31
UPK1AO00322 AL158209.2-201ENST00000619266 216 ntBASIC0.6□□□□□ -2.31
UPK1AO00322 AC009248.2-201ENST00000619826 254 ntBASIC0.6□□□□□ -2.31
UPK1AO00322 HSBP1P2-201ENST00000299671 229 ntBASIC0.59□□□□□ -2.31
UPK1AO00322 Y_RNA.100-201ENST00000363141 102 ntBASIC0.59□□□□□ -2.31
UPK1AO00322 RNU6-522P-201ENST00000364497 107 ntBASIC0.59□□□□□ -2.31
UPK1AO00322 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.59□□□□□ -2.31
UPK1AO00322 MIR517A-201ENST00000385001 87 ntBASIC0.59□□□□□ -2.31
UPK1AO00322 RNU6-159P-201ENST00000391080 106 ntBASIC0.59□□□□□ -2.31
UPK1AO00322 AC006461.1-201ENST00000412637 326 ntBASIC0.59□□□□□ -2.31
UPK1AO00322 LINC01399-202ENST00000458450 244 ntBASIC0.59□□□□□ -2.31
UPK1AO00322 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC0.59□□□□□ -2.31
UPK1AO00322 AC022493.2-201ENST00000506122 481 ntBASIC0.59□□□□□ -2.31
UPK1AO00322 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC0.59□□□□□ -2.31
UPK1AO00322 AC010598.1-201ENST00000510378 103 ntBASIC0.59□□□□□ -2.31
UPK1AO00322 RNU6-917P-201ENST00000516294 104 ntBASIC0.59□□□□□ -2.31
UPK1AO00322 RNU7-28P-201ENST00000516759 62 ntBASIC0.59□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 125.6 ms