Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 Y_RNA.259-201ENST00000364619 101 ntBASIC1.6□□□□□ -2.15
NPIPA3F8WFD2 RNA5SP323-201ENST00000391094 133 ntBASIC1.6□□□□□ -2.15
NPIPA3F8WFD2 EBAG9P1-201ENST00000418955 543 ntBASIC1.6□□□□□ -2.15
NPIPA3F8WFD2 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.6□□□□□ -2.15
NPIPA3F8WFD2 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC1.6□□□□□ -2.15
NPIPA3F8WFD2 HSPE1P21-201ENST00000438283 308 ntBASIC1.6□□□□□ -2.15
NPIPA3F8WFD2 HSPE1P9-201ENST00000440046 311 ntBASIC1.6□□□□□ -2.15
NPIPA3F8WFD2 AL117351.2-201ENST00000513571 157 ntBASIC1.6□□□□□ -2.15
NPIPA3F8WFD2 RNU6-250P-201ENST00000516958 103 ntBASIC1.6□□□□□ -2.15
NPIPA3F8WFD2 RNA5SP437-201ENST00000517249 129 ntBASIC1.6□□□□□ -2.15
NPIPA3F8WFD2 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.6□□□□□ -2.15
NPIPA3F8WFD2 MIR4419B-201ENST00000577260 68 ntBASIC1.6□□□□□ -2.15
NPIPA3F8WFD2 MIR3618-201ENST00000580330 88 ntBASIC1.6□□□□□ -2.15
NPIPA3F8WFD2 AL132765.2-201ENST00000610812 351 ntBASIC1.6□□□□□ -2.15
NPIPA3F8WFD2 AL357075.2-201ENST00000614906 189 ntBASIC1.6□□□□□ -2.15
NPIPA3F8WFD2 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC1.6□□□□□ -2.15
NPIPA3F8WFD2 RNU6-1266P-201ENST00000362794 105 ntBASIC1.59□□□□□ -2.15
NPIPA3F8WFD2 Y_RNA.338-201ENST00000365320 114 ntBASIC1.59□□□□□ -2.15
NPIPA3F8WFD2 Y_RNA.356-201ENST00000365475 113 ntBASIC1.59□□□□□ -2.15
NPIPA3F8WFD2 RNU6-1145P-201ENST00000384246 107 ntBASIC1.59□□□□□ -2.15
NPIPA3F8WFD2 Y_RNA.577-201ENST00000384794 101 ntBASIC1.59□□□□□ -2.15
NPIPA3F8WFD2 MIR625-201ENST00000385047 85 ntBASIC1.59□□□□□ -2.15
NPIPA3F8WFD2 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
NPIPA3F8WFD2 MTCYBP4-201ENST00000401524 249 ntBASIC1.59□□□□□ -2.15
NPIPA3F8WFD2 AC108667.1-201ENST00000428618 249 ntBASIC1.59□□□□□ -2.15
NPIPA3F8WFD2 MTND5P20-201ENST00000448677 143 ntBASIC1.59□□□□□ -2.15
NPIPA3F8WFD2 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.59□□□□□ -2.15
NPIPA3F8WFD2 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.59□□□□□ -2.15
NPIPA3F8WFD2 RPL36AP21-201ENST00000490372 323 ntBASIC1.59□□□□□ -2.15
NPIPA3F8WFD2 AC105758.1-201ENST00000506038 399 ntBASIC1.59□□□□□ -2.15
NPIPA3F8WFD2 RNU6-470P-201ENST00000515954 104 ntBASIC1.59□□□□□ -2.15
NPIPA3F8WFD2 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.59□□□□□ -2.15
NPIPA3F8WFD2 AC027419.1-201ENST00000522976 328 ntBASIC1.59□□□□□ -2.15
NPIPA3F8WFD2 AL355375.2-201ENST00000574825 175 ntBASIC1.59□□□□□ -2.15
NPIPA3F8WFD2 AC104260.1-201ENST00000616660 539 ntBASIC1.59□□□□□ -2.15
NPIPA3F8WFD2 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.59□□□□□ -2.16
NPIPA3F8WFD2 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.58□□□□□ -2.16
NPIPA3F8WFD2 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.58□□□□□ -2.16
NPIPA3F8WFD2 RNU6-318P-201ENST00000384283 103 ntBASIC1.58□□□□□ -2.16
NPIPA3F8WFD2 RNY3P14-201ENST00000384309 102 ntBASIC1.58□□□□□ -2.16
NPIPA3F8WFD2 RNU6-1009P-201ENST00000390996 107 ntBASIC1.58□□□□□ -2.16
NPIPA3F8WFD2 AC073910.1-201ENST00000445047 438 ntBASIC1.58□□□□□ -2.16
NPIPA3F8WFD2 PCNPP5-201ENST00000452246 481 ntBASIC1.58□□□□□ -2.16
NPIPA3F8WFD2 RNU7-169P-201ENST00000459456 61 ntBASIC1.58□□□□□ -2.16
NPIPA3F8WFD2 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.58□□□□□ -2.16
NPIPA3F8WFD2 CYCSP23-201ENST00000519781 313 ntBASIC1.58□□□□□ -2.16
NPIPA3F8WFD2 SUB1P3-201ENST00000564581 315 ntBASIC1.58□□□□□ -2.16
NPIPA3F8WFD2 MIR3683-201ENST00000580847 82 ntBASIC1.58□□□□□ -2.16
NPIPA3F8WFD2 MIR502-201ENST00000606349 86 ntBASIC1.58□□□□□ -2.16
NPIPA3F8WFD2 AC025253.1-201ENST00000613623 543 ntBASIC1.58□□□□□ -2.16
NPIPA3F8WFD2 AC133104.2-201ENST00000615272 193 ntBASIC1.58□□□□□ -2.16
NPIPA3F8WFD2 AC084781.2-201ENST00000615568 161 ntBASIC1.58□□□□□ -2.16
NPIPA3F8WFD2 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.58□□□□□ -2.16
NPIPA3F8WFD2 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.58□□□□□ -2.16
NPIPA3F8WFD2 RNU6-661P-201ENST00000362409 107 ntBASIC1.57□□□□□ -2.16
NPIPA3F8WFD2 RNU6-414P-201ENST00000363705 104 ntBASIC1.57□□□□□ -2.16
NPIPA3F8WFD2 RNU6-457P-201ENST00000363999 107 ntBASIC1.57□□□□□ -2.16
NPIPA3F8WFD2 RNY3P11-201ENST00000364153 102 ntBASIC1.57□□□□□ -2.16
NPIPA3F8WFD2 SNORA63D-201ENST00000364359 132 ntBASIC1.57□□□□□ -2.16
NPIPA3F8WFD2 RNU4-42P-201ENST00000364738 142 ntBASIC1.57□□□□□ -2.16
NPIPA3F8WFD2 SNORA72.2-201ENST00000365028 127 ntBASIC1.57□□□□□ -2.16
NPIPA3F8WFD2 Y_RNA.498-201ENST00000384460 102 ntBASIC1.57□□□□□ -2.16
NPIPA3F8WFD2 SNORD116-29-201ENST00000384516 83 ntBASIC1.57□□□□□ -2.16
NPIPA3F8WFD2 Y_RNA.529-201ENST00000384586 119 ntBASIC1.57□□□□□ -2.16
NPIPA3F8WFD2 SNORA69.1-201ENST00000390904 137 ntBASIC1.57□□□□□ -2.16
NPIPA3F8WFD2 SNORA17.3-201ENST00000391159 129 ntBASIC1.57□□□□□ -2.16
NPIPA3F8WFD2 RNU6-1186P-201ENST00000410429 97 ntBASIC1.57□□□□□ -2.16
NPIPA3F8WFD2 ELOCP21-201ENST00000412558 336 ntBASIC1.57□□□□□ -2.16
NPIPA3F8WFD2 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.57□□□□□ -2.16
NPIPA3F8WFD2 AC069257.2-201ENST00000441819 155 ntBASIC1.57□□□□□ -2.16
NPIPA3F8WFD2 RN7SKP49-201ENST00000516675 260 ntBASIC1.57□□□□□ -2.16
NPIPA3F8WFD2 RNU1-142P-201ENST00000516682 145 ntBASIC1.57□□□□□ -2.16
NPIPA3F8WFD2 Y_RNA.702-201ENST00000516843 96 ntBASIC1.57□□□□□ -2.16
NPIPA3F8WFD2 Y_RNA.718-201ENST00000517110 102 ntBASIC1.57□□□□□ -2.16
NPIPA3F8WFD2 CBX3P4-201ENST00000538909 354 ntBASIC1.57□□□□□ -2.16
NPIPA3F8WFD2 AC024614.2-201ENST00000577584 372 ntBASIC1.57□□□□□ -2.16
NPIPA3F8WFD2 MIR8074-201ENST00000615081 81 ntBASIC1.57□□□□□ -2.16
NPIPA3F8WFD2 AC087588.2-201ENST00000617667 426 ntBASIC1.57□□□□□ -2.16
NPIPA3F8WFD2 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.57□□□□□ -2.16
NPIPA3F8WFD2 MIR515-2-201ENST00000384883 83 ntBASIC1.56□□□□□ -2.16
NPIPA3F8WFD2 MIR515-1-201ENST00000384884 83 ntBASIC1.56□□□□□ -2.16
NPIPA3F8WFD2 MIR30A-201ENST00000385092 71 ntBASIC1.56□□□□□ -2.16
NPIPA3F8WFD2 RNY4P36-201ENST00000391116 96 ntBASIC1.56□□□□□ -2.16
NPIPA3F8WFD2 MRPS18CP6-201ENST00000423587 223 ntBASIC1.56□□□□□ -2.16
NPIPA3F8WFD2 TOMM22P2-201ENST00000430735 237 ntBASIC1.56□□□□□ -2.16
NPIPA3F8WFD2 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC1.56□□□□□ -2.16
NPIPA3F8WFD2 Y_RNA.632-201ENST00000459189 102 ntBASIC1.56□□□□□ -2.16
NPIPA3F8WFD2 AL163195.1-201ENST00000496941 348 ntBASIC1.56□□□□□ -2.16
NPIPA3F8WFD2 SNORA44.1-201ENST00000517031 108 ntBASIC1.56□□□□□ -2.16
NPIPA3F8WFD2 AC018448.1-201ENST00000552843 316 ntBASIC1.56□□□□□ -2.16
NPIPA3F8WFD2 AC073544.1-201ENST00000600110 1595 ntBASIC1.55□□□□□ -2.16
NPIPA3F8WFD2 MIR424-201ENST00000362227 98 ntBASIC1.55□□□□□ -2.16
NPIPA3F8WFD2 RNU6-1301P-201ENST00000362724 104 ntBASIC1.55□□□□□ -2.16
NPIPA3F8WFD2 Y_RNA.67-201ENST00000362870 100 ntBASIC1.55□□□□□ -2.16
NPIPA3F8WFD2 Y_RNA.314-201ENST00000365114 102 ntBASIC1.55□□□□□ -2.16
NPIPA3F8WFD2 RNU6-360P-201ENST00000390944 104 ntBASIC1.55□□□□□ -2.16
NPIPA3F8WFD2 SNORD12B-201ENST00000410433 91 ntBASIC1.55□□□□□ -2.16
NPIPA3F8WFD2 Y_RNA.605-201ENST00000410577 105 ntBASIC1.55□□□□□ -2.16
NPIPA3F8WFD2 AC005002.2-201ENST00000438228 269 ntBASIC1.55□□□□□ -2.16
NPIPA3F8WFD2 ELOCP24-201ENST00000456370 334 ntBASIC1.55□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 112.4 ms